HG10014730 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGATCATTAGCCCTTTTCCCCTTCCTCTGAATCTTCTTGTTGTAAATCGTTCTCCATTTATCTTTTCTGCTTTTGGTTCTGTCAGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAATGCTGCCCTAAGGTTATTGTTTTACTCATCTTTCTGCGCAATTCTTGCATGCATATCTTGATTGTTTAATGGCAGAGGTCAAATCTATATGCATTGCAAATGTTTTCTCTGCGGAATGGGGGGGGGGGGGGGGGTCATTTTGTGTATTAATTAGCTTTTTTTTTTTTTTTTTTAATTTCTTTATTGCAAGTATAACTGGTGTGTTTATGGTTGAGTGTTCTAGAAATGAGGGATAAGTGTCTGCCAAGTTTGGGGATATGATTTTTTATGTTGAATGTTAGTATCTATATGAGTTTGTATTTATATTGTTGTTAAGTGATTGTTTGGTTGGATTTTCGATAAGTTAAAAAAGTAGACGTTTTATAGAAGTACTTTTTTAAAAGGAAATGGAATTCTCTTAGGCGTTCTCAAACTCAACGCTTTATTAGGTTTGAGGTCTGTCTGAAGACAAGATTCTAACTTTTAGCCATGAGACTTATGCCTTCTTTTGACCGTAAGAGGTTTATTCTCTTATATGAGAAAGTTTACGCTTCCCTGAAAATGCACTAAGGCTTAAAAGTCTTTACACCTCTCAAAAAAATTAGGAGAATTACATGAAGTTACCCAACTTCTAAAATATAAAGGTTCTTTTGTGTTTGTAATGTTAATAAATGACTTGTGGCAATTCAACCAGTCACTAGTTTGACTATCTAAGCTTCAAAGTCATTGAAGACAAAACTGTACAAATAAGTCATCAATCCTCAGAGTGGCGATGTTAAGAAATTCTAAATTATAAAAAAATACCCGTGAACTTTCCATTGGTTTAAAAAAATGCCCCTATTTAAGTTGCAATATTAATAACTTTGACTTTTTATAAAGTTTTCCAAACTACCCTTGAAGTAGAAATACACTAAAGCTTTGGATGGAATTTGGGACCTAGAACGGATATGGCAATTACCTAGAATAGTGTGTGGTGGTATATGGTTCTCTCAATTTTATTTCTTAGTCTTCACCATACCATTTCAAGTCCTAATTTTTGTGCAATATTCTAATGGACTTCTACTCTAAGGGTAGTTTTGAAAAGTTAATGAAAGTTTAAGGGTAGTATTTTAACTTTTGAAAAAAATATGGGTATTTTTTAAATAATGGGCAAAGTTTAGGGGTGTTTTTTGTAATTTAGCCTAGAAATTTTATTTAGGTGACAATTGATGGGTAATTTTTCCAATACTTGAAGAAAAGTCTCGAGACCACCTTTTGTCTTTTTAAACATTGCTTAAGCACACTAGTTGTGGACGGTGTGAATTTTGAGCGTCCATTGACTATGGCAAAAGAGCAGTTGAATTTTATTTTAGCAAAGAGCTGAAGTTGATTAAATCTAACATCATTAGTTTTGATTGATGAGAATAGGACAAGGCTATTAAGAGGTTTCTTGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGACCGTAAGTTTTTTTGTTCACTTGATATATTTTGGTTGCTCTATTTCATATAACAAGCGTATTTTTGTTAAGTGTCTGATATAGATCGCTGTGTATGTTTTCTGAGCAGAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGTTAGTCTTTGCATAAATTATTTATAACTTTAATTCATAACTAAGTAACCATATTAACAGTGAATTTGATGAAGCGTGTCTATTTTATATGCTCTTATTACTCATAAACGATGGTTGGTGTTTGCATAAGATATTTATAGATTTGATTCATCATGAAGTAACAATGATCACAGTGCATTTGATTAAGTCTGTTTATCTTTACTCTTAACATTTAATGAGCTCAAATTTTTATGACGAGCAGTAGAAAGAGTATTTGCATCATAATGTTATCTTAACTCTTATGCTTCTTTTATAATCATTGATGAATATGAGAAACTCCTCCATTAGGTACTTTGTTTGCTGCATTCTTGTTACCAAATGAATACATTTGTATTATTACTATGTATTAAGAAAATAATCCATCCGACATCATTATATTTTTAAAACTTGGTTCAGATGGTTCCCCTACACTTGCGGTTTGATATGTTAAACTCATTTTATTTTAATTATGATACCAACTATTTGGTAAGACTATTGACGTTCATCTTATACTTGTTAGTGCATGTAACTCAGTTCTTTTCGTTGGTCCATCTAGTGTAGCTTAAGCATGTATACTTCCCTACAATGAGATAGCTTAAGCATGTAGTTTATGTGTTTGTTTTCAGGAGGATCAGCCAAAGCCTGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCTCGTGTATAA ATGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCTATTAAGAGGTTTCTTGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGCCAAAGCCTGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCTCGTGTATAA ATGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCTATTAAGAGGTTTCTTGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGCCAAAGCCTGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCTCGTGTATAA MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQAPRPVGAGNPARV Homology
BLAST of HG10014730 vs. NCBI nr
Match: XP_004146441.1 (40S ribosomal protein S26-1 [Cucumis sativus] >XP_008456941.1 PREDICTED: 40S ribosomal protein S26-1 [Cucumis melo] >XP_038891817.1 40S ribosomal protein S26-1-like [Benincasa hispida] >KAA0067538.1 hypothetical protein E6C27_scaffold50G00610 [Cucumis melo var. makuwa] >KGN50730.1 hypothetical protein Csa_005888 [Cucumis sativus] >TYK22411.1 hypothetical protein E5676_scaffold530G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 261.5 bits (667), Expect = 3.7e-66 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of HG10014730 vs. NCBI nr
Match: XP_022943123.1 (40S ribosomal protein S26-1-like [Cucurbita moschata] >XP_022987349.1 40S ribosomal protein S26-1-like [Cucurbita maxima] >KAG6600881.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031515.1 40S ribosomal protein S26-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10014730 vs. NCBI nr
Match: XP_023529394.1 (40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10014730 vs. NCBI nr
Match: XP_022941874.1 (40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_023532350.1 40S ribosomal protein S26-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.3 bits (656), Expect = 7.0e-65 Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of HG10014730 vs. NCBI nr
Match: KAG6599946.1 (40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030627.1 40S ribosomal protein S26-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64 Identity = 127/135 (94.07%), Postives = 129/135 (95.56%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy Swiss-Prot
Match: P49206 (40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2) HSP 1 Score: 216.1 bits (549), Expect = 2.4e-55 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy Swiss-Prot
Match: Q8LPJ7 (40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2) HSP 1 Score: 216.1 bits (549), Expect = 2.4e-55 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy Swiss-Prot
Match: Q9LYK9 (40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 6.9e-55 Identity = 108/127 (85.04%), Postives = 113/127 (88.98%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy Swiss-Prot
Match: P49216 (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2 SV=2) HSP 1 Score: 196.8 bits (499), Expect = 1.5e-49 Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy Swiss-Prot
Match: O45499 (40S ribosomal protein S26 OS=Caenorhabditis elegans OX=6239 GN=rps-26 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37 Identity = 81/120 (67.50%), Postives = 93/120 (77.50%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy TrEMBL
Match: A0A5A7VIJ0 (40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00060 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy TrEMBL
Match: A0A0A0KM45 (40S ribosomal protein S26 OS=Cucumis sativus OX=3659 GN=Csa_5G220930 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy TrEMBL
Match: A0A1S3C5M1 (40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496738 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy TrEMBL
Match: A0A6J1JIN0 (40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111484926 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10014730 vs. ExPASy TrEMBL
Match: A0A6J1FWD9 (40S ribosomal protein S26 OS=Cucurbita moschata OX=3662 GN=LOC111447947 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10014730 vs. TAIR 10
Match: AT2G40510.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-56 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of HG10014730 vs. TAIR 10
Match: AT2G40590.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-56 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of HG10014730 vs. TAIR 10
Match: AT3G56340.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 214.5 bits (545), Expect = 4.9e-56 Identity = 108/127 (85.04%), Postives = 113/127 (88.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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