HG10005902 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTCACTCGTCATAATTCTTTCTGTATGCTTTCATTTCTTTTCTTTCCATTCAGTTCTTACTCTTACTTCTCCAGTTTTATTTAATTCTTTCTGAGTAGTTCGAGATTTTATTGCAACTCATTAATTATGGTAGTTTCAGCTCTTACTTCTTGGATTAGTTTTGAGAAATTGGATTCAAATAGAGAAGAAAATGTCTATGCATAAAAGAAAGAAAAGAGAACAGGGGAAACAAAAAGCCCTAATCTTCATCTTCTACCTCTCCCTCTCTCTCTCACAGCCGTTGACCCCCTTCTCCCCTTTTCTGTTCATCTCCTTCTCCGGCGTCACTTCCTCCCTGCGACGCATCTCCGGCGACCTTTAGCGGCTGCGTGCGGTTCTCCCCTCTCGACTGGGTCATTTAACTGTTGAATTCCACACTCAAGTAGCACTTTTTTTTTAGTATAACCATTGCGGATTGAACATCGAACTTCCAACCTTTAGAAAGAGTTAAGCTAGTTTTGGCTTAGTCATATTTGACGTTTTGATACAAGATAGTTTACCTTAAGACTTAGTAGAGTAATTACAATGAGTAACACTTTTATAGACCGATAATTAAGTGTATAGCGACATATTGTAAATAGGATAATTGCAATGAACACTTTTAACACTAGAAATTAAGTGTATATCAATATTTTAAAAGAATTATAAATATAGCAAAATCAATTAGTGGTAAACTATATTGATGAGAGAAACCTATTAGTGATGGACTCCAATACTATGAGAATTAGATCTAAATTTTGCTATATTTACACTATTTTTTGCATTGTGCTATATTTGCTAATACTTTAAGTCTAGTTGCTATAAAAATTTGCAACTGGCACTTGCAAATATAGTCAAATCTATTCGTGACTTGATTGCTGATAGACTTCTACGAGTGATGAACTTTATCCCTGATAGACTTCGAGAGTTTGATCTAAAATTTGTCATATATGTAAATTCTTTTACGTTGTATTATATCTATTAATACTTTGAACTTGATTGTTATATTTGCAACCGTCTTGGTATATAATTATTTGTTGTTCTTGTATATATGTGGAGGTAGGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY Homology
BLAST of HG10005902 vs. NCBI nr
Match: XP_008462782.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucumis melo] >TYJ99021.1 NAD(P)H-quinone oxidoreductase subunit T [Cucumis melo var. makuwa]) HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108 Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of HG10005902 vs. NCBI nr
Match: XP_038893780.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Benincasa hispida]) HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107 Identity = 210/239 (87.87%), Postives = 220/239 (92.05%), Query Frame = 0
BLAST of HG10005902 vs. NCBI nr
Match: KAG7033427.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106 Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of HG10005902 vs. NCBI nr
Match: KAG6602740.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106 Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of HG10005902 vs. NCBI nr
Match: XP_022963850.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata]) HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106 Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q9SMS0 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.2e-70 Identity = 137/215 (63.72%), Postives = 171/215 (79.53%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q75VW3 (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.6e-11 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q5KWZ8 (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q45552 (Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: C5D4U0 (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.6e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A5D3BJW7 (NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002250 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108 Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A1S3CHS6 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501040 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108 Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A6J1HJ56 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464036 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106 Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A0A0LT25 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105 Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 0
BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A6J1JM84 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487152 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 204/239 (85.36%), Postives = 213/239 (89.12%), Query Frame = 0
BLAST of HG10005902 vs. TAIR 10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.5e-71 Identity = 137/215 (63.72%), Postives = 171/215 (79.53%), Query Frame = 0
BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of HG10005902 vs. TAIR 10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09 Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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