HG10005902 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005902
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit T
Location	Chr07: 7959163 .. 7960967 (+)
RNA-Seq Expression	HG10005902
Synteny	HG10005902

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTCACTCGTCATAATTCTTTCTGTATGCTTTCATTTCTTTTCTTTCCATTCAGTTCTTACTCTTACTTCTCCAGTTTTATTTAATTCTTTCTGAGTAGTTCGAGATTTTATTGCAACTCATTAATTATGGTAGTTTCAGCTCTTACTTCTTGGATTAGTTTTGAGAAATTGGATTCAAATAGAGAAGAAAATGTCTATGCATAAAAGAAAGAAAAGAGAACAGGGGAAACAAAAAGCCCTAATCTTCATCTTCTACCTCTCCCTCTCTCTCTCACAGCCGTTGACCCCCTTCTCCCCTTTTCTGTTCATCTCCTTCTCCGGCGTCACTTCCTCCCTGCGACGCATCTCCGGCGACCTTTAGCGGCTGCGTGCGGTTCTCCCCTCTCGACTGGGTCATTTAACTGTTGAATTCCACACTCAAGTAGCACTTTTTTTTTAGTATAACCATTGCGGATTGAACATCGAACTTCCAACCTTTAGAAAGAGTTAAGCTAGTTTTGGCTTAGTCATATTTGACGTTTTGATACAAGATAGTTTACCTTAAGACTTAGTAGAGTAATTACAATGAGTAACACTTTTATAGACCGATAATTAAGTGTATAGCGACATATTGTAAATAGGATAATTGCAATGAACACTTTTAACACTAGAAATTAAGTGTATATCAATATTTTAAAAGAATTATAAATATAGCAAAATCAATTAGTGGTAAACTATATTGATGAGAGAAACCTATTAGTGATGGACTCCAATACTATGAGAATTAGATCTAAATTTTGCTATATTTACACTATTTTTTGCATTGTGCTATATTTGCTAATACTTTAAGTCTAGTTGCTATAAAAATTTGCAACTGGCACTTGCAAATATAGTCAAATCTATTCGTGACTTGATTGCTGATAGACTTCTACGAGTGATGAACTTTATCCCTGATAGACTTCGAGAGTTTGATCTAAAATTTGTCATATATGTAAATTCTTTTACGTTGTATTATATCTATTAATACTTTGAACTTGATTGTTATATTTGCAACCGTCTTGGTATATAATTATTTGTTGTTCTTGTATATATGTGGAGGTAGGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA

mRNA sequence

ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA

Coding sequence (CDS)

ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCCCAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATGATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGAGTGGGAGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGCAAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTTGCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA

Protein sequence

MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY

Homology

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BLAST of HG10005902 vs. NCBI nr
Match: XP_008462782.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucumis melo] >TYJ99021.1 NAD(P)H-quinone oxidoreductase subunit T [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108
Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEG
Sbjct: 1   MASSPFPNSLLFHKT-FHSPAPAFRTWRVYAAQA--PNNDRRRPPPGVDTRIHWQNEEEG 60

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQFLGVGAEAE+EEIKSAYRRLS
Sbjct: 61  WIGG-KKKESND-QNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLS 120

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLK ASEKFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 121 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNW+STPDMVDRL GRNM+LSDQATTALT+DI IILFAIACIVYVLIFKEPYY
Sbjct: 181 PYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

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BLAST of HG10005902 vs. NCBI nr
Match: XP_038893780.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Benincasa hispida])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 210/239 (87.87%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASPPIPNSLL H T FHS A TFR+WRVYASQAP+ N+ ++RPPPGVDTRIHWQNQEEG
Sbjct: 1   MASPPIPNSLLFHKT-FHSSARTFRSWRVYASQAPN-NDPQRRPPPGVDTRIHWQNQEEG 60

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WIGG HKKET  HDN      LGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS
Sbjct: 61  WIGG-HKKETKVHDNKT----LGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLK ASEKFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQA+KLRIKLED
Sbjct: 121 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQAEKLRIKLED 180

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNWKSTPDMVDRL GRNM+LSDQATTALT+DI IILFAIACIVYVL+FKEPYY
Sbjct: 181 PYEQELQNWKSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLLFKEPYY 232

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BLAST of HG10005902 vs. NCBI nr
Match: KAG7033427.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEG
Sbjct: 244 MASPSIPNSLFLNRT-FHSPARTFRTWPVYASQPP---NNRQRPPPGVDTRIHWQNDEEG 303

Query: 61  WIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAY 120
           WIGG      +++  + +NNNNNN LGPSL DLLNNSSDSHYQFLGVGAEA+LEEIKSAY
Sbjct: 304 WIGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAY 363

Query: 121 RRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRI 180
           RRLSKEYHPDTTSLPLKAAS+KFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRI
Sbjct: 364 RRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRI 423

Query: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKE 240
           KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALT+DILIILFAI CIVYVL+FKE
Sbjct: 424 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKE 482

[Close]

BLAST of HG10005902 vs. NCBI nr
Match: KAG6602740.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEG
Sbjct: 235 MASPSIPNSLFLNRT-FHSPARTFRTWPVYASQPP---NNRQRPPPGVDTRIHWQNDEEG 294

Query: 61  WIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAY 120
           WIGG      +++  + +NNNNNN LGPSL DLLNNSSDSHYQFLGVGAEA+LEEIKSAY
Sbjct: 295 WIGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAY 354

Query: 121 RRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRI 180
           RRLSKEYHPDTTSLPLKAAS+KFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRI
Sbjct: 355 RRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRI 414

Query: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKE 240
           KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALT+DILIILFAI CIVYVL+FKE
Sbjct: 415 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKE 473

[Close]

BLAST of HG10005902 vs. NCBI nr
Match: XP_022963850.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEG
Sbjct: 1   MASPSIPNSLFLNRT-FHSPARTFRTWPVYASQPP---NNRQRPPPGVDTRIHWQNDEEG 60

Query: 61  WIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAY 120
           WIGG      +++  + +NNNNNN LGPSL DLLNNSSDSHYQFLGVGAEA+LEEIKSAY
Sbjct: 61  WIGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAY 120

Query: 121 RRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRI 180
           RRLSKEYHPDTTSLPLKAAS+KFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRI
Sbjct: 121 RRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRI 180

Query: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKE 240
           KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALT+DILIILFAI CIVYVL+FKE
Sbjct: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKE 239

[Close]

BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q9SMS0 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.2e-70
Identity = 137/215 (63.72%), Postives = 171/215 (79.53%), Query Frame = 0


Query: 25  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGP 84
           R  R+YASQ P+  +   +P PGVDTRIHW++ +EGWIGG         D +  N +   
Sbjct: 39  RVTRIYASQGPTKPS---KPSPGVDTRIHWESPDEGWIGG-RSDPAKSVDEDKTNLLSDE 98

Query: 85  SLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQ 144
             A+L+ +S DSHYQFLGV  +A+LEEIKSAYRRLSKEYHPDTTSLPLK ASEKFMKL++
Sbjct: 99  KFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLRE 158

Query: 145 VYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNM 204
           VY+VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GRNM
Sbjct: 159 VYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNM 218

Query: 205 DLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           +LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 ELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q75VW3 (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.6e-11
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 97  HYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRK 156
           +YQ LGV  +A  EEIK AYRRL+KEYHPD ++   + ASEKF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 157 FYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTP 194
            YD  L   +     D +   ++D  E   Q  + +P
Sbjct: 66  EYDRILKSGDEKSYRDFMEY-IQDFLESIWQGMRRSP 99

[Close]

BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q5KWZ8 (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 97  HYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRK 156
           +Y+ LGV   A  +EIK AYR+LSK+YHPD    P   A+EKF ++K+ Y+VLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 157 FYD 160
            YD
Sbjct: 66  RYD 66

[Close]

BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: Q45552 (Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 97  HYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRK 156
           +Y+ LGV   A  EEIK AYR+LSK+YHPD    P   A+EKF ++K+ Y+VLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 157 FYD 160
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of HG10005902 vs. ExPASy Swiss-Prot
Match: C5D4U0 (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.6e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 97  HYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRK 156
           +Y+ LGV   A  EEIK AYR+LSK+YHPD    P   A+EKF ++K+ Y+VLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 157 FYD 160
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A5D3BJW7 (NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002250 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEG
Sbjct: 1   MASSPFPNSLLFHKT-FHSPAPAFRTWRVYAAQA--PNNDRRRPPPGVDTRIHWQNEEEG 60

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQFLGVGAEAE+EEIKSAYRRLS
Sbjct: 61  WIGG-KKKESND-QNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLS 120

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLK ASEKFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 121 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNW+STPDMVDRL GRNM+LSDQATTALT+DI IILFAIACIVYVLIFKEPYY
Sbjct: 181 PYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A1S3CHS6 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501040 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEG
Sbjct: 1   MASSPFPNSLLFHKT-FHSPAPAFRTWRVYAAQA--PNNDRRRPPPGVDTRIHWQNEEEG 60

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQFLGVGAEAE+EEIKSAYRRLS
Sbjct: 61  WIGG-KKKESND-QNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLS 120

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLK ASEKFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 121 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNW+STPDMVDRL GRNM+LSDQATTALT+DI IILFAIACIVYVLIFKEPYY
Sbjct: 181 PYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A6J1HJ56 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464036 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 207/243 (85.19%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEG
Sbjct: 1   MASPSIPNSLFLNRT-FHSPARTFRTWPVYASQPP---NNRQRPPPGVDTRIHWQNDEEG 60

Query: 61  WIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAY 120
           WIGG      +++  + +NNNNNN LGPSL DLLNNSSDSHYQFLGVGAEA+LEEIKSAY
Sbjct: 61  WIGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAY 120

Query: 121 RRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRI 180
           RRLSKEYHPDTTSLPLKAAS+KFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRI
Sbjct: 121 RRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRI 180

Query: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKE 240
           KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALT+DILIILFAI CIVYVL+FKE
Sbjct: 181 KLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKE 239

[Close]

BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A0A0LT25 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MASPP PNSLL H T FHS A TFRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEG
Sbjct: 1   MASPPFPNSLLFHKT-FHSSAPTFRTWRVYAAQA--PNNDRRRPPPGVDTRIHWQNEEEG 60

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WI G  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQFLGV AEAE+EEIKSAYRRLS
Sbjct: 61  WI-GRKKKESND-QNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLS 120

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLK ASEKFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLR+KLED
Sbjct: 121 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLED 180

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNW STPDMVDRL GRN++LSDQA+TALT+DI IILFAIACIVYVL+FKEPYY
Sbjct: 181 PYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]

BLAST of HG10005902 vs. ExPASy TrEMBL
Match: A0A6J1JM84 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487152 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 204/239 (85.36%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEG 60
           MAS PIPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEG
Sbjct: 3   MAS-PIPNSLFLNRT-FHSPARTFRTWPVYASQPP---NNRQRPPPGVDTRIHWQNDEEG 62

Query: 61  WIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLS 120
           WIGG    ++       NNN LGPS ADLLNNSSDSHYQFLGVGAEA+LEEIKSAYRRLS
Sbjct: 63  WIGGPTPSQSRRDQKEQNNNALGPSFADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 122

Query: 121 KEYHPDTTSLPLKAASEKFMKLKQVYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180
           KEYHPDTTSLPLKAAS+KFMKLKQVY+VLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 123 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 182

Query: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALT+DILIILFAI CIVYVL+FKEPYY
Sbjct: 183 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 236

[Close]

BLAST of HG10005902 vs. TAIR 10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-71
Identity = 137/215 (63.72%), Postives = 171/215 (79.53%), Query Frame = 0


Query: 25  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGP 84
           R  R+YASQ P+  +   +P PGVDTRIHW++ +EGWIGG         D +  N +   
Sbjct: 39  RVTRIYASQGPTKPS---KPSPGVDTRIHWESPDEGWIGG-RSDPAKSVDEDKTNLLSDE 98

Query: 85  SLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQ 144
             A+L+ +S DSHYQFLGV  +A+LEEIKSAYRRLSKEYHPDTTSLPLK ASEKFMKL++
Sbjct: 99  KFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLRE 158

Query: 145 VYDVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNM 204
           VY+VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GRNM
Sbjct: 159 VYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNM 218

Query: 205 DLSDQATTALTVDILIILFAIACIVYVLIFKEPYY 240
           +LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 ELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 93  SSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNE 152
           +S  +Y  LGV   A  +EIK+AYRRL+++YHPD    P   A+EKF ++   Y+VLS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 153 ESRKFYD 160
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 93  SSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNE 152
           +S  +Y  LGV   A  +EIK+AYRRL+++YHPD    P   A+EKF ++   Y+VLS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 153 ESRKFYD 160
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of HG10005902 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 93  SSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEKFMKLKQVYDVLSNE 152
           +S  +Y  LGV   A  +EIK+AYRRL+++YHPD    P   A+EKF ++   Y+VLS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 153 ESRKFYD 160
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of HG10005902 vs. TAIR 10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 19  SPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNN 78
           +PAH+FR       Q P PN     PP      I  + +  G  GG+ ++          
Sbjct: 14  NPAHSFR------HQFPQPNASFYLPP---TLPIFSRVRRFGISGGYRRRV--------- 73

Query: 79  NNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLSKEYHPDTTSLPLKAASEK 138
                     +   +   HY  L V   A L+EIKS+YR+L+++YHPD    P   A +K
Sbjct: 74  ----------ITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNP--GAEDK 124

Query: 139 FMKLKQVYDVLSNEESRKFYD 160
           F ++   Y+VLS+EE R  YD
Sbjct: 134 FKQISAAYEVLSDEEKRSAYD 124

The following BLAST results are available for this feature:

BLAST of HG10005902 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462782.1	4.3e-108	88.28	PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucumis melo...	[more]
XP_038893780.1	2.8e-107	87.87	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Benincasa hispida]	[more]
KAG7033427.1	2.3e-106	85.19	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6602740.1	2.3e-106	85.19	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argy...	[more]
XP_022963850.1	2.3e-106	85.19	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata]	[more]

BLAST of HG10005902 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMS0	2.2e-70	63.72	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q75VW3	6.6e-11	42.27	Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12...	[more]
Q5KWZ8	3.3e-10	50.79	Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=...	[more]
Q45552	4.3e-10	50.79	Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV...	[more]
C5D4U0	5.6e-10	50.79	Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 ...	[more]

BLAST of HG10005902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJW7	2.1e-108	88.28	NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CHS6	2.1e-108	88.28	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1HJ56	1.1e-106	85.19	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX...	[more]
A0A0A0LT25	2.1e-105	86.19	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1	[more]
A0A6J1JM84	1.2e-103	85.36	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3...	[more]

BLAST of HG10005902 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09350.1	1.5e-71	63.72	Chaperone DnaJ-domain superfamily protein	[more]
AT1G80030.1	3.4e-10	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.3	3.4e-10	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.2	3.4e-10	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT3G17830.1	3.7e-09	31.91	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 98..116 score: 47.7 coord: 134..154 score: 34.27 coord: 116..131 score: 43.45
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 95..154 e-value: 3.4E-17 score: 73.1
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 97..159 e-value: 3.0E-19 score: 68.9
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 96..162 score: 17.862194
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 97..151 e-value: 1.60498E-16 score: 69.1113
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 85..183 e-value: 3.1E-20 score: 74.3
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 13..158
IPR044618	NAD(P)H-quinone oxidoreductase subunit T-like	PANTHER	PTHR45283	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC	coord: 19..238
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 139..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005902.1	HG10005902.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)