HG10002785 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCCAAATTCCTTAGCGACTTCTATTCTTAAGATCATTTACTTTCCAAATAGCTCAATTCTTGATGCTGATATGGGATCCAATCGTTCTGTTCCTTGGAGAAGCCTTATTTGGGGCAGAGAGGTGGTTAAACTGGGGCTAAGGTTTCGGGTGGGTAATAGAAAAGCCATCAGATTATTCTTAGATCCTTGGATCCCAAGAGCACTTACCTTCAAACCTACCTTGATTAATCATGAGTTTAAAGATGCTCTTGTGGCAGATTTTATTGATTCTGATGGCCAATGGATGTTGAATAAGCTTGAAGTTGTCCTTCTTAAAGAGGATGTTGAAGCCATTTGCCGGATTCCCATTAATAAAAGGTTAAATGATAAATGGGTATGA ATGAACCCAAATTCCTTAGCGACTTCTATTCTTAAGATCATTTACTTTCCAAATAGCTCAATTCTTGATGCTGATATGGGATCCAATCGTTCTGTTCCTTGGAGAAGCCTTATTTGGGGCAGAGAGGTGGTTAAACTGGGGCTAAGGTTTCGGGTGGGTAATAGAAAAGCCATCAGATTATTCTTAGATCCTTGGATCCCAAGAGCACTTACCTTCAAACCTACCTTGATTAATCATGAGTTTAAAGATGCTCTTGTGGCAGATTTTATTGATTCTGATGGCCAATGGATGTTGAATAAGCTTGAAGTTGTCCTTCTTAAAGAGGATGTTGAAGCCATTTGCCGGATTCCCATTAATAAAAGGTTAAATGATAAATGGGTATGA ATGAACCCAAATTCCTTAGCGACTTCTATTCTTAAGATCATTTACTTTCCAAATAGCTCAATTCTTGATGCTGATATGGGATCCAATCGTTCTGTTCCTTGGAGAAGCCTTATTTGGGGCAGAGAGGTGGTTAAACTGGGGCTAAGGTTTCGGGTGGGTAATAGAAAAGCCATCAGATTATTCTTAGATCCTTGGATCCCAAGAGCACTTACCTTCAAACCTACCTTGATTAATCATGAGTTTAAAGATGCTCTTGTGGCAGATTTTATTGATTCTGATGGCCAATGGATGTTGAATAAGCTTGAAGTTGTCCTTCTTAAAGAGGATGTTGAAGCCATTTGCCGGATTCCCATTAATAAAAGGTTAAATGATAAATGGGTATGA MNPNSLATSILKIIYFPNSSILDADMGSNRSVPWRSLIWGREVVKLGLRFRVGNRKAIRLFLDPWIPRALTFKPTLINHEFKDALVADFIDSDGQWMLNKLEVVLLKEDVEAICRIPINKRLNDKWV Homology
BLAST of HG10002785 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-21 Identity = 49/114 (42.98%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of HG10002785 vs. NCBI nr
Match: ABB46931.2 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]) HSP 1 Score: 111.3 bits (277), Expect = 6.1e-21 Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of HG10002785 vs. NCBI nr
Match: AAM01179.2 (Putative retroelement [Oryza sativa Japonica Group]) HSP 1 Score: 111.3 bits (277), Expect = 6.1e-21 Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of HG10002785 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 109.4 bits (272), Expect = 2.3e-20 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of HG10002785 vs. NCBI nr
Match: EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group]) HSP 1 Score: 105.9 bits (263), Expect = 2.6e-19 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07 Identity = 24/64 (37.50%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy TrEMBL
Match: Q8S5K1 (Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0011A24.23 PE=4 SV=2) HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21 Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy TrEMBL
Match: Q33AJ4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g09610 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21 Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy TrEMBL
Match: B8AFP4 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06800 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of HG10002785 vs. ExPASy TrEMBL
Match: A0A5E4F9F7 (PREDICTED: reverse mRNAase OS=Prunus dulcis OX=3755 GN=ALMOND_2B012785 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.2e-19 Identity = 53/117 (45.30%), Postives = 71/117 (60.68%), Query Frame = 0
BLAST of HG10002785 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08 Identity = 24/64 (37.50%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of HG10002785 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06 Identity = 34/134 (25.37%), Postives = 66/134 (49.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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