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Cucsat.G8548 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAATGCCTTAGTGCTTTACAATTGTGCAATAAATTTCTTTGGATCTGAAGCCTTTCCCATAATTTCCTTTTCCTTTCCTTGATAACTACAAAACCCTCTCTCTCTCTCTCTCTTTCTGTCTCAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGTGTGATTTTCTTTTTCAACAGTTGATAAAAGGGTATGTTTTTGTTTTAAAATTTTGGAATAATAATAATTTGATTATTGTGTTAACTTAGCAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTTATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTTACTCATTGGTGAACTTCCACTCAATTTCCCTTGTATGTTAAGAAAAATAATAATGGGAAG ATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAA MVHPKLFSTLLLLSCFLLLSFTHGTQTSSSIYFLILFSCIFLYIYSSPELTSFIFNFFSQGLKVEMIESLGHGSNVRISPSLKGIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPSPAT Homology
BLAST of Cucsat.G8548 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 166 bits (421), Expect = 2.53e-51 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Cucsat.G8548 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 90.1 bits (222), Expect = 2.32e-21 Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Cucsat.G8548 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 71.6 bits (174), Expect = 8.13e-14 Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Cucsat.G8548 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 71.6 bits (174), Expect = 8.57e-14 Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of Cucsat.G8548 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 70.9 bits (172), Expect = 1.59e-13 Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Cucsat.G8548 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 166 bits (421), Expect = 1.22e-51 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Cucsat.G8548 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.12e-21 Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Cucsat.G8548 vs. ExPASy TrEMBL
Match: A0A498HG62 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037098 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.24e-10 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Cucsat.G8548 vs. ExPASy TrEMBL
Match: A0A540L840 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_031846 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.49e-10 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Cucsat.G8548 vs. ExPASy TrEMBL
Match: A0A2P5CWE3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_116840 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.69e-10 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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