Cucsat.G8548.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAATGCCTTAGTGCTTTACAATTGTGCAATAAATTTCTTTGGATCTGAAGCCTTTCCCATAATTTCCTTTTCCTTTCCTTGATAACTACAAAACCCTCTCTCTCTCTCTCTCTTTCTGTCTCAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGTGTGATTTTCTTTTTCAACAGTTGATAAAAGGGTATGTTTTTGTTTTAAAATTTTGGAATAATAATAATTTGATTATTGTGTTAACTTAGCAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTTATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTTACTCATTGGTGAACTTCCACTCAATTTCCCTTGTATGTTAAGAAAAATAATAATGGGAAG ATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAA MVHPKLFSTLLLLSCFLLLSFTHGTQTSSSIYFLILFSCIFLYIYSSPELTSFIFNFFSQGLKVEMIESLGHGSNVRISPSLKGIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPSPAT Homology
BLAST of Cucsat.G8548.T3 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 152 bits (383), Expect = 2.74e-45 Identity = 86/123 (69.92%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 8.18e-23 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 70.1 bits (170), Expect = 5.21e-13 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 67.0 bits (162), Expect = 8.18e-12 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.1 bits (157), Expect = 5.00e-11 Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 1.33e-45 Identity = 86/123 (69.92%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.96e-23 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. ExPASy TrEMBL
Match: A0A0A0LCS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825030 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.35e-07 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. ExPASy TrEMBL
Match: A0A059AEU1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J01355 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.97e-06 Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 0
BLAST of Cucsat.G8548.T3 vs. ExPASy TrEMBL
Match: A0A498HG62 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037098 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.16e-06 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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