Cucsat.G8177 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8177
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg1557: 2228083 .. 2234550 (+)
RNA-Seq Expression	Cucsat.G8177
Synteny	Cucsat.G8177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACTTTACCCATTTCCCAAATGAAATTATAAATTTAGTCCTTCAAACAATATTATCCCAATACCTTTTATTTGTTTCTTAAATTTCAATGCTCCAATATTTATAAATATCAGGCTTTAATATTTAAACAAAATGGAGTTCATCAAAGTCTATCATTGATTGATACAAGTGTAGTAGATGCATTTTGTTATTGTTTTACATAAAGTGAAAATGCATATAGTTTATTGTGTTTAGGCAAAATATTAGATTTAATAGTCTTTAGTAGACATAGATAAAGATCAATAGTAGGGAGGATACTATTTATCCAAATCCTCTTTTCTCTTTCCCCTCTCCGTCGGAGCCCCGTCGTTAGCCGCTGAAGGTCTACAAGCTCTCATCTACAATAGCGGCACGGAATTGCAGACGTCAGCTGTCAACTCATTTTTTTCACGCATCTTTTGAACTTATAAATTCTCTCTCTACCCACCACCGCCCATCGCCGGAGAAGGTGTGAACGGTTCTATATGTAATCACAGCACGGAATTGAAGAGAGGTTAACTATTATCTTGGCTTTCGGCGGAGAACTTGGTCGGTGCAACTTGCTAAAATGCGATCTGACCCGCAAATAGAACGGGCACAGCCGCGAATAATGGTTTAATCGTATCGCGATATTCAGGGCCAGGTTGCTCCGCCGTCATTTTGAAAAATACTTCAATTGGTGACCTACACAGAACAGTTAGTTTGTTTTTTCTTCTCTCTTTTACTTTTTGTGTGGAGATATTTACTCTGTGTTTCTACTTCGTGTCTCAGACTTCTTTTGGAGTATATTGGATTTATTCATGAAATTGGAGTTCTTTTGAAATGGTGGGAGTTATAATGGCGAACCTAAATTTGTGCATCCCTAATTGTGAAAGATATGGATTTCCGACACTGCATTGTACCCATAATTCCCACAATTCTTTTTGGGTTTCGTTCTTTCCTAGTTCGGTTTCTGGAACTGACTCAAGTCTTAGTGACGCGAAGAATAGAGTTTTGAGACATAGGGTTCATAAATGTGGATCAATTAAGGCTTTGTCGAATGGAGAATCTGATATTTCATTGCCAAGTGGGAATCTCCTCGAACATGATTTTCAATTTAAGCCATCGTTTGATGAATATGTGAAGGTCATGGAGACTGTTAGAACTAGAAGGTATAAGAGGCAGTTGGATGATCCTAATAAACTGACAATGAAGGAAAATGGGAGTGCAAAGAGTGCTGAGAGCACTTCCATTTCTAAGATAGATAATGGAAAAAACAAAGTAACTGATGTTCAACATAACGTGGACGTAAAGAACATGTTTAAACGGGTGGATAAAAAAGATTTGTTCAATAATACAGAGAGAATTGCTCCTGAAAAGGATTTGTCAGGAAATAAATTTGATAGAAGGAAGGTAGTTACAAGATCAAATGATAAGGTTAAAGGCAAGATGACCCCTTTTGGCTCACTGGTTAATGATAAACAACATGAAGAGAAAAGGAACGAAAACTGGTCAAGTTACATTGAGCCTAGAGTAACACGATCGAACAGCAAGAAACCAATTCATTTTAAAGCTAATACGTTGGAGGTCAAAAAAGAAAGCAGCCGTGTCTCTGATGGAAATTCCATGAAAACATCAGAAAAGATTTGGGCTTGGGGTGATGATGACGCTAAACCAGCTAAGGGTGTTCTTAAGGCTGGGAAATATGGCATTCAGCTCGAAAGAAGCTATAATCCTGGTGACAAGGTTGGTAGAAAGAAAACTGAGCAGTCCTACAGAGGGACATCCACAAGTGGTAAGCGTTTTCTTGAATTTAATGAAAAGAATAGCTTGGAGGTAGAACATGCAGCCTTCAACAATTTTGATGCATTCGACATAATGGACAAACCCAGAGTTTCAAAGATGGAAATGGAAGAGAGAATCCAGATGCTTTCTAAGAGGTTTGGTGTCCCTTGCTCACTTGTCTGTCTTGCTGAAAGTTTAAATTTGACTTGGTACAAGTCTGAAATCAAAACTATTACCTTATTCGATACTTCTTCTTTGTTTGGGCGGGGGTCTGTGAAATTAATATTCTTAATTTGTTAAATTTGAATTTCTTAACAACATTTCTACTAGGTATATGGGTGGACAAGGTTGTGTACTAGTTTTTTAATGGTTTTAAATATTTCCTTTTCTTGGCCAGGATATTTTATTGTTAAGTTCTTCAGGGTTGAGTTCAAGTATTTCTGGGGCCCGATTTTTAGTGTTATGTTTATTGAGCTTCAAGTCGTTTCTTTCTAAGGAAATTTTTAATTTAGTTTGAAGAGTATTAACTTCAGCTGCACCACTTATTCAATTTCAGACAATAGAGTCCAATCTAAGAACTTTGAAGTCTACTGAGCTAAATATTTGAGTGGTAAATGTGAAAGTTAGAAATCTACTTGCATTTGGTTATAACTCAACTCCATCGAGATAATATATGTTATTGGGTTCAAATGATGGTCATGAACTGTTTGCTTGCCTGCTGTTTTATGTTTTCTTTTTATCACTCACACATGTATTGCAGGCTCTTGAGTTATTCATTGTATGGAGACTTCTTTCATAGTCATCTCCAACATCTTTTAGGATTTGAAATTTAATTACTAATCTGCACTCAACTGTGCTATGAGGGGATTCCAAGAACACTAATCAAATTTCAATTATTTGAACTTTGAGGATTATTAATTAGTCTCTCCATATTAATTTATTTGAAGGACTTCCTTGTCAACAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGGTTTTTCCCTGTTTCTCACCTTTACTACTTGATTAATGTAGTGATAGTTCTAATAAAGTCCTTGGTTATGATGCCTTAAAAGAGTAAGAGTGGCCAGTGATGCCTTTCCTCGGTCTTGAAGTGCAATTTAGATTTTCTTTTTTATATTTGTAGTGTCTCAACCAACTTACATGCATTTCGGCTAATTTCACGAGACAATCCACCCGATCCTACAATATTTTGGTGTCAAGAAAACTCATAGAACATTAATTCTTTGGTAGGTGACCACTATATAATAAATCCACGACCTATTAGTTAGTTATTGAGACAATGTCTCCTTTTTACCACTAGGCCAACCTACGAGGGAGGATCAATGTTTTGAACGGCGCACTTGGGCACACGCCTAAGTGCAAGGCTCAACGGTGGTGCCTCGCCTCAGAAAGTTGAGGTGCATGAAATAAGGCACACGCCTTTCGGTGAATCACTTAAAATGTAAACTATTTTGCATTTTAGGGTTTCTGTTTGCCCATTTATTGTAAATATGTTTATACATATATAATTTTTAAACCTAATTTGGCATCATTTCTTAAAAAAATAGAACGTCTTTTCCTCTCCTTTCTCTCACCTTCTTCATTCTTCACTGTATCACCGTCTTCCTCTTCGTCTCCAATCTTCACTGAATCATCATTTACGGTGGATATCAAAGATTTAAAAGACCATCAAAATTATCTGGCACTTGATTCTTCTCCAAAATACAAAGGAATGCCAACATTCTTCCTGACCTCTTGGTCCTCCTCTCTTCAATTCTTCTAACTAAATCTTTTTTTTTTTTGTATAATCTTCTTTAAGTCCCATTTCTATCCATCTAAGTTTTGGTTGTGTAAATAAACATGTAAGTTTATAATGCCTAGGCTCCAGAGCCATTGGGCCTTGGGCATTTTAAGACACTGGGGAGGATAAAAAGGAAAGATAAAAGAGGAGAGAGAGAGGGGATATGGCCATCAGATTTTAAATTTAATCTCTTTTAAGAATATAAAGAAAGTGCTAAAGTATTGAATAATAAATTAAATTTAACTCATCACCCCCCCCCCCCCCCCCCCCACCCCCCACCCCCACACACCACACGATTAGGTACATTGCTGATTTAACATGGTATTAGAGCAAGAGGTCCCACTGTTCAAACTCCTAAAATATCATTTTTTCTTCAATTAATACTAATTTCTAATTTTCAAGCCCACAAGTGAAGGTGAGTATTAAAGTATTAATATAACTAAATTTATTTAAACCCATCAACTTAAGCTTTTTGAGTTTGTTGGGAATTTGTTAGATACCTAGATTAGTATACATGGTTTATCTTGTATAAGGGTAATTAGATTAGTGGGTGTAAGGGTAATTAGATACTTAGGAAGTTACTAGTCGTTATTGTGTAAGTGTGTTTACTAGTAGTTATTATTTAAGTGTGATTACTGGGGTTGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGAGGTTACTGTGGAGTGATTTGGGGTTTGGGTGAGAGTACTCAAGAGGGAGGTTCTAGGTGCCTTATACATGGGTTTATCTTGTATCTTCTTATAGTTCATTATAATAAATTAAGATCTTGTTAACAAGTATTCTTACAGAATTTAACAAAAAATCTTCATCCTAAGTTCCCAACATTTTCTAAAGAATCTTGCACCCACTAAAAAAAATTAATTAGAGAGAATTGAACCTTAATCTAATAATTTGTCCTCATCATTAATCAAATGAACTGGAAAGCTGCGATAATGCTGAAAAATAACTCAAATATGATAAAAACATCAGAAATCTTAAAATGGAAAAGATATTCACTTTCTTGCATTGCCCTGTCACCAAGTATGTTCTTTGACTAACAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGTAGGCAGTTAACTAACAACCTTCACTAGGATTTGCTGTCTTGGTCTGCGCACGTTTATGCAAGTGGATGCTGAAATTGACAGAATTTTTACTAACTCTGGTTGTGCCATCTCGGTTTCCCTTCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTGAGTCATAATTGGTAGATTATTTTATATTTTACAGGCAATATTTGGTTAATGTAATATACTGAGCAATTTTGTGGAAAAAAATGTTAAAGAGCAAAATAATCTTGTTATGGATATTTTCTGCTGTTTTGCTCGTAATATATTTATTCTTAGATCTGAGAATTCAAATATGACAATCATCTAGATTTTAGTGAATGTTTTGTTATCATTGTTCCATGATTGACGAAAGATTTAGATTTTGTACACATGGTTGGATTTCATTATTTTTCTTTTCCTTTTCCTTTTGGATAAAAGGCACCACTTCTAATTTGACAAATGAAAGGAATATAAAAAGAGGCATAGGAAAAAACTAGGCTCTACAACAAAATTGGGCAACCAAAAACGAGAGAAACACACATTAAGAACACTAATTCATCAGAAAAAGGAGAAAAATCCCAAAACAAATTGCAAAAACAACCTAATAGGGTCGAGTGAAGCTGAGAGTTAGTGGCAAATTTTTTTTTTTAAATTTGATTAATTAATTAATTAATATTATTATTGGTTTCTTCTGGTAGGAAATGTTAACATTTTTTTAGATGATATGAAATTACAGAGTTGATTCTTCAAAGCATTGTTTATTTTCTTTACGTTTTCACTTTCCATCTAACATACTGTTGCTATTTTCCTTTCTATTTTTTTCATAAAATTTTAAATTACTCAGTCATTAAGGCAAGTCTCCAGCATTGCTTCCTCCATTTGTTGCAAGGATATGTTTTTCTTCAAAACTTTTCTCATGTTTATTCATTATTACTATGAGATGCCAATAGAAACAACGTTATTTCCGAATTCTTTATGGAAATATATCTTGCATGGGTTTCTTTCAAGTTGTTCACTTGCAGTAGCCATTTTATTTCTTTCTTTCAGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTAGCTGGTCCTTTAATTTCTTTCTATTGTTCATGTAATTTGCAAGTCTATTTTGAAATTCAGAATGATTTTTCTAATGCTCGTTGCTTGAGATGCTGTGAATGAGAAATGCTTGATTTTGTGCACCCAAGAAGGAATGAACACTCATTAAGTTGCGTTGAATTCACTCAGTAACGTGTTAAATATTATTCTTACCTTTTGATTAGTAGAAAGTAAATGGTTTTGGGTATTGCATGGACACAGAGTGGACATATTGGGTTCTGAGTCTTTGAAGAGAATTAGTCGAAAGGTAGATTCTCTACCAAGTCCATGTTCCTAAACTTCACTAAGGGAGTTGCAAAAAATAATTATAGTCAACCTTATGTGGTACTGGAAGCTTAAAATTTCCAAGAAAGTAAAGATTTTCCTTTGGTCACTTGCTTATAGAAGTCTAAATATTCACAAGAAGCTTCAGAGAACGTTCCCTAATTGGTCCCTCTCCTCCATTTGCTGTCTTTTTCTTAGGGAGATGGAAACTATAGGTCACTTGTTCTTGCATTCTGAGTTTACTTTTAGAGGTTGGCAAATTCTCTTTAGTACTTTTGTGGTGGCTAGTTGCCTTCCTAAAAAAATCGATGATTGAATGATGGAAGTTTCTGCAGAAAAGGGAAAATCCTTCGGAGAAGTGCTACTCAAGTGCTTTTGTGGTTTCTTTGGAAAAAAAAAGAGAATAATACATTGTTTGACGATAATTTTGTTTCTTTTGATTTTTTTGGGCTTTTGTTCAACGTGCAACCTCTCGGTGATGTTCAAGCTACACCAATTTTTTTTTTCCAAAGCATTTCTATAACTATTCGCTATGAAACATTAATCTTAGTTGGATCCCCTTCCTTTAGTGGGGCTCTTTTTTTGTTGCGCTTGTTATTTTTTTCTATTTCCTTGTATTCTTTCATTTTTTCTCAATTAAAGTTGTTTCTATTAAAAAAAAAAAGAAGTTAGACCAAATTCTTTTTTAATTATAGCATTCTCATGATTATGAGCAATGGAGGGCTTTTCTCTATAGTTTTGTGGAGAGGTTTTCTCTACCCCTGCCTCTAGGCTGTTCTGGTAGCTCTTTTGATGAATATATATCTGTTTCTTATAAACAAAAAAGTCCTAACAGTGAATGGTAAGCCTAGAAAGAAAGAAGAAGATCTAGACCATCTTTTCAAGACATTGTTCAATAGGTATGAAAAACACCAATCTTTCGTGTTGTTTGCCTTATCCTTTCTCAATCAATCGCATATGAGTAAGTGCGTGCTTGGACTTGGTCAAGGATACATTTTATGGTTAGATTATGTAATCACTTATCACAAGCAGCTTTTGAACGATTACTTGCGTCTATCCTTCATAAAATATAAGTCACTTGATTGACGGTTATTCATGTGCACTGAAAATTATTGTTCACAAGTTCATGATTTTTTAAAAGAAACTTTAGTTCATGCACTGTTGAGAATGAATTAAGGTAACCCAATTTCTAAAACCTGTTATTTAATTATTTTCCCAAGTTCCTCTTTTCCCTGTGAAGCAAAAAAAGTTCGTTCTTTAAGTCGACTCTTAAACTGCCCCTAGATTTTCAATTTAGGTGAAGAAAAATAATTTGATCGGATGTTCTTCTACTATTAAAATTTGAAAGTCATGCTTCCATGACTTAATTTATTTGATTGTGCTGAAGTTACATTTTCATATGCAAGTAAGCCTATTGAAATTTTCTATTTACTGAATGAAACAGTTGAAATATTCTATTTACTGAACGAAACATTTTTCAATGAATGATAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGGTAGACTCGGTAGTCACAGTGTGTTTATTTGTTTCTTGTTATATATTTGCTTAATGGCTTGTCAAATTTCCAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGGTATTTCATAGTAAATTTTTGTTTTTTCTTTCAGCCTTTTATTTGTTTTTCCCTTTCTCATCCAACTTATATTTTATTTTTTCTCTTATGTGGATATATTATATATTACTATTGGTTATTTCCATGAGTTGGTTCAAAATGTTATCCCCTGAGTTTGAGCTCTATTTCCTAAGATGGGAGAAGTAGAAGTTGTTTATTATTTAAGAAGAAATTAGTCGACCTGACTCAATATGATAAGTCAAACAACATAGGATTTGGTTTCTCTTTATCACTCGCTCTTTTTGTTTAAAAAATACTGAATTTGAGGTTAACTAATCACCATATCTTAAAAATTCTCAAAACCTTTGAGTCTTTCTTAATCATGCCTACAATTTCATGATGAGCTTTATTGCCCCATAGTAATGTTTCTGCCTCAGACATCTCTTTCTGAGTGAATTTCTGGCTCCTTAATATTCTTGGCCTCTCCTTTGGGAGGTCAAATTTACTTCATAGTTCAAACTGTCTGGTTGCACATCCTGATTGCAGTCTGTTTACACGAATGATAATTAATGAATAGACCTCACGACGACCTTGTTATTGTTTACAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGTGGACCTTTTAAATTCAACGTCTTTTTCTTTCCTTGGTTCTCCTCCTTCCTTTCTACGTTTCTATATCTTTTTATATTGCACCACTAGCCTATTTTAAACGTGTATAGTTTAAGTTGGCTCTAGGAATGTTGCTTAATGCTTATAATTGACGATAGTTTTAAATATGCACATGCTAAAGAGATGTAATGATAATAATAGATAATATCATGAAACTATTGGAGGCTGAATTCGACCATTTTCCTATGACGTTTGACTTCTTAGGTGTATGACATTGATCATTTGTTGAAGTATTGAGAAAACAAAACGCTAAATCAATTTATTTTTTAATTGATCATGAAATTCAAGATTAAATTGTTCCTTGGCTATTAAGGGGTTCATAACTTCACATTCATGCTTAGAATTCGAGTTCTGCTTATACTAAGAAAAGAAACTATATTCCTTTATGATCTGTGGATGACTTGGTCTTAATTTCCTGCTCTACAAAAGGAATAAACTAAGATAAGTTGATCGCTTAGACTCATTATGGTTTTGCTTTCCTTTAACCATCGACTTCTGTTGTACAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAAAATGAAATCTAACCTGCTGCTATCACATATATATCTATCTATCTATATATATTTAGCATAATTTGAGAGGAAATAATTTTGTTTTATTCATTCTTTTGTCCTCAGTTTATGTATTACATAAAGGAACTAGAAAAGGAAAATCAATAATATTTGTACGAAGTTATTGTTGATTTGAAAAATAGAGTTTC

Coding sequence (CDS)

ATGGTGGGAGTTATAATGGCGAACCTAAATTTGTGCATCCCTAATTGTGAAAGATATGGATTTCCGACACTGCATTGTACCCATAATTCCCACAATTCTTTTTGGGTTTCGTTCTTTCCTAGTTCGGTTTCTGGAACTGACTCAAGTCTTAGTGACGCGAAGAATAGAGTTTTGAGACATAGGGTTCATAAATGTGGATCAATTAAGGCTTTGTCGAATGGAGAATCTGATATTTCATTGCCAAGTGGGAATCTCCTCGAACATGATTTTCAATTTAAGCCATCGTTTGATGAATATGTGAAGGTCATGGAGACTGTTAGAACTAGAAGGTATAAGAGGCAGTTGGATGATCCTAATAAACTGACAATGAAGGAAAATGGGAGTGCAAAGAGTGCTGAGAGCACTTCCATTTCTAAGATAGATAATGGAAAAAACAAAGTAACTGATGTTCAACATAACGTGGACGTAAAGAACATGTTTAAACGGGTGGATAAAAAAGATTTGTTCAATAATACAGAGAGAATTGCTCCTGAAAAGGATTTGTCAGGAAATAAATTTGATAGAAGGAAGGTAGTTACAAGATCAAATGATAAGGTTAAAGGCAAGATGACCCCTTTTGGCTCACTGGTTAATGATAAACAACATGAAGAGAAAAGGAACGAAAACTGGTCAAGTTACATTGAGCCTAGAGTAACACGATCGAACAGCAAGAAACCAATTCATTTTAAAGCTAATACGTTGGAGGTCAAAAAAGAAAGCAGCCGTGTCTCTGATGGAAATTCCATGAAAACATCAGAAAAGATTTGGGCTTGGGGTGATGATGACGCTAAACCAGCTAAGGGTGTTCTTAAGGCTGGGAAATATGGCATTCAGCTCGAAAGAAGCTATAATCCTGGTGACAAGGTTGGTAGAAAGAAAACTGAGCAGTCCTACAGAGGGACATCCACAAGTGGTAAGCGTTTTCTTGAATTTAATGAAAAGAATAGCTTGGAGGTAGAACATGCAGCCTTCAACAATTTTGATGCATTCGACATAATGGACAAACCCAGAGTTTCAAAGATGGAAATGGAAGAGAGAATCCAGATGCTTTCTAAGAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAA

Protein sequence

MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETVY

Homology

[Close]

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot
Match: Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 2.8e-159
Identity = 281/467 (60.17%), Postives = 347/467 (74.30%), Query Frame = 0


Query: 6    SSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYN 65
            SSYPD+VAY SIAVTLGQAG+++ELF VID+MRSPPKKKFK   LEKWDPRL+PD+V+YN
Sbjct: 538  SSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYN 597

Query: 66   AVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKS 125
            AVLNACV+RK  EGAFWVLQ+LK++  +PS  TYGL+MEVML C KYNLVHEFFRK+QKS
Sbjct: 598  AVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS 657

Query: 126  SIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEAL 185
            SIPNAL Y+VLVNTLWKEGK+DEAV  +E+ME RGIVGSAALYYD ARCLCSAGRC E L
Sbjct: 658  SIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGL 717

Query: 186  ----------------------------MQMEKICKVANKPLVVTYTGLIQACLDSKDLQ 245
                                         Q++KIC+VANKPLVVTYTGLIQAC+DS +++
Sbjct: 718  NMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIK 777

Query: 246  SAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRV 305
            +A YIF+ MK  CSPNLVT NI+LK YL+ G+FEEARELFQ +SE   +I   SD+  RV
Sbjct: 778  NAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRV 837

Query: 306  LPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLET 365
            LPD Y FNTMLD    +++WDDF Y Y +M  +GYHFN KRHLRM+LEA+R GK+E++E 
Sbjct: 838  LPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEA 897

Query: 366  TWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHN----SGDAHHFSESAWLNL 425
            TW+H+ +++R PP PL+KERF  KL +GD+  A+SS+   N      +   FS SAW  +
Sbjct: 898  TWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRV 957

Query: 426  LKEKRFPRDTVIELIHKVGMVL-TRNESPNPVFKNLLLSCKEFCRTR 440
            L   RF +D+V+ L+  V   L +R+ES + V  NLL SCK++ +TR
Sbjct: 958  L--SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTR 1002

[Close]

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot
Match: Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 5.3e-86
Identity = 174/441 (39.46%), Postives = 263/441 (59.64%), Query Frame = 0


Query: 8   YPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAV 67
           YPD+ AYH IAVTLGQAG ++EL  VI+ MR  P K  K    + WDP L+PD+V+YNA+
Sbjct: 288 YPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAI 347

Query: 68  LNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKS-S 127
           LNACV     +   WV  EL+K  L+P+ +TYGL MEVMLE GK++ VH+FFRK++ S  
Sbjct: 348 LNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGE 407

Query: 128 IPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALM 187
            P A+TYKVLV  LW+EGK +EAV A+ +ME +G++G+ ++YY+ A CLC+ GR  +A++
Sbjct: 408 APKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAML 467

Query: 188 QMEKICKVAN-KPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYL 247
           ++ ++ ++ N +PL +T+TGLI A L+   +   + IF +MK  C PN+ T N++LK Y 
Sbjct: 468 EVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYG 527

Query: 248 EHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYN 307
            + MF EA+ELF+ +         VS     ++P+ Y ++ ML+AS    +W+ F + Y 
Sbjct: 528 RNDMFSEAKELFEEI---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQ 587

Query: 308 QMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARG 367
            M L GY  +  +H  M++EA+R GK  LLE  +  + +    P P    E  C   A+G
Sbjct: 588 TMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKG 647

Query: 368 DYSEALSSIWSHNSGDAHHFSESAWLNLLKEKR--FPRDTVIELIHKVG-MVLTRNESPN 427
           D+  A++ I +  +  +   SE  W +L +E +    +D     +HK+   ++  +    
Sbjct: 648 DFQRAITLI-NTVALASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSE 707

Query: 428 PVFKNLLLSCKEFCRTRISLA 444
           P   NL  S K  C +  S A
Sbjct: 708 PTVSNLSKSLKSRCGSSSSSA 714

[Close]

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot
Match: Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.1e-22
Identity = 57/214 (26.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 55  PRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNL 114
           P  +P + +YN +L +C+K + +E   W+ +++    + P T T+ L++  + +    + 
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165

Query: 115 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFAR 174
             E F ++ +K   PN  T+ +LV    K G TD+ +  +  ME  G++ +  +Y     
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225

Query: 175 CLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK-----A 234
             C  GR  ++   +EK+ +    P +VT+   I A      +  A  IF+ M+      
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 235 FCSPNLVTYNILLKGYLEHGMFEEARELFQNLSE 263
              PN +TYN++LKG+ + G+ E+A+ LF+++ E
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

[Close]

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.2e-22
Identity = 86/342 (25.15%), Postives = 146/342 (42.69%), Query Frame = 0


Query: 36  SMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPS 95
           ++R+ PK      +LEK+    QPD+  YNA++N   K   ++ A  VL  ++ +   P 
Sbjct: 136 TLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD 195

Query: 96  TSTYGLVMEVMLECGKYNLVHEFFRKVQKSSI-PNALTYKVLVNTLWKEGKTDEAVLAIE 155
           T TY +++  +   GK +L  +   ++   +  P  +TY +L+     EG  DEA+  ++
Sbjct: 196 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 255

Query: 156 NMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 215
            M  RG+      Y    R +C  G    A   +  +     +P V++Y  L++A L+  
Sbjct: 256 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 315

Query: 216 DLQSAVYIFNHM-KAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDY 275
             +    +   M    C PN+VTY+IL+      G  EEA  L + + E+          
Sbjct: 316 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK---------- 375

Query: 276 RDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGK-D 335
              + PD Y ++ ++ A   E R D    F   M   G   +   +  ++    + GK D
Sbjct: 376 --GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 435

Query: 336 ELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSI 375
           + LE   K L +   +P        F    + GD   AL  I
Sbjct: 436 QALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461

[Close]

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-20
Identity = 72/287 (25.09%), Postives = 131/287 (45.64%), Query Frame = 0


Query: 58  QPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHE 117
           +P ++  N ++N       +  A  ++  + +   QP+  TYG V+ VM + G+  L  E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 118 FFRKVQKSSIP-NALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLC 177
             RK+++ +I  +A+ Y ++++ L K+G  D A      MEI+G       Y       C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 178 SAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNH-MKAFCSPNLV 237
           +AGR  +    +  + K    P VVT++ LI + +    L+ A  +    M+   +PN +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 238 TYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEK 297
           TYN L+ G+ +    EEA ++   +      IS   D      PDI  FN +++      
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLM------ISKGCD------PDIMTFNILINGYCKAN 429

Query: 298 RWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHL 343
           R DD    + +M L G   N   +  ++    + GK E+ +  ++ +
Sbjct: 430 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

[Close]

BLAST of Cucsat.G8177 vs. NCBI nr
Match: XP_031741862.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >XP_031741863.1 pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >KGN65965.1 hypothetical protein Csa_023210 [Cucumis sativus])

HSP 1 Score: 925 bits (2390), Expect = 0.0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD
Sbjct: 456 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 515

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 516 IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 575

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR
Sbjct: 576 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 635

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL
Sbjct: 636 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 695

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 696 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 755

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 756 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 815

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES
Sbjct: 816 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 875

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRISLADHRLEETVY
Sbjct: 876 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 907

[Close]

BLAST of Cucsat.G8177 vs. NCBI nr
Match: KAA0047051.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 431/452 (95.35%), Postives = 441/452 (97.57%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 443 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 502

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 503 IVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 562

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGR
Sbjct: 563 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGR 622

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNIL
Sbjct: 623 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNIL 682

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 683 LKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 742

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 743 SYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCM 802

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           K+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NES
Sbjct: 803 KVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNES 862

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 863 PNPVFKNLLLSCKEFCRTRISVADHRLEETVH 894

[Close]

BLAST of Cucsat.G8177 vs. NCBI nr
Match: XP_008459122.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis melo])

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 431/452 (95.35%), Postives = 441/452 (97.57%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 458 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 517

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 518 IVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 577

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGR
Sbjct: 578 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGR 637

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNIL
Sbjct: 638 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNIL 697

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 698 LKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 757

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 758 SYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCM 817

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           K+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NES
Sbjct: 818 KVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNES 877

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 878 PNPVFKNLLLSCKEFCRTRISVADHRLEETVH 909

[Close]

BLAST of Cucsat.G8177 vs. NCBI nr
Match: XP_038894404.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 864 bits (2233), Expect = 1.80e-308
Identity = 419/451 (92.90%), Postives = 435/451 (96.45%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQ+HF+SYPDLVAYHSIAVTLGQAGYM+ELFDVIDSMRSPPKKKFKTGVLEKWDPRL+PD
Sbjct: 455 MQQHFTSYPDLVAYHSIAVTLGQAGYMKELFDVIDSMRSPPKKKFKTGVLEKWDPRLEPD 514

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 515 IVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 574

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME RGIVGSAALYYDFARCLCSAGR
Sbjct: 575 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFARCLCSAGR 634

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVA KPLVVTYTGLIQACLDSKD++SAVYIFNHMK FCSPNLVTYN+L
Sbjct: 635 CKEALMQMEKICKVATKPLVVTYTGLIQACLDSKDIRSAVYIFNHMKTFCSPNLVTYNML 694

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEARELFQNLSE  RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 695 LKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 754

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
            YFY+QM LYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 755 GYFYDQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLAQADRTPPPPLLKERFCM 814

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           KLARGDYSEALS I +H+S D HHFSES WLNLLKEKRFP+DTVI+LI+KV M+LTRN+ 
Sbjct: 815 KLARGDYSEALSCISNHDSSDVHHFSESGWLNLLKEKRFPKDTVIQLINKVSMLLTRNDL 874

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETV 451
           PNPVFKNLLLSCKEFCRTRIS+ADHRLEETV
Sbjct: 875 PNPVFKNLLLSCKEFCRTRISVADHRLEETV 905

[Close]

BLAST of Cucsat.G8177 vs. NCBI nr
Match: XP_023519692.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 832 bits (2149), Expect = 7.67e-296
Identity = 405/451 (89.80%), Postives = 427/451 (94.68%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 447 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 506

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKN EGAFWVLQELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFR
Sbjct: 507 IVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFR 566

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGR
Sbjct: 567 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGR 626

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NIL
Sbjct: 627 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNIL 686

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYL+HGMF+EA+ELFQN+SE  RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDF
Sbjct: 687 LKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDF 746

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           S+FYNQM LYGYHFNPKRHLRMI+EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+
Sbjct: 747 SHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCI 806

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
            LARGDYSEALS I  H+S D HHFS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+S
Sbjct: 807 MLARGDYSEALSCISKHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDS 866

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETV 451
           PNPV +NLLLS KEFCR+RIS+AD RLEE V
Sbjct: 867 PNPVLQNLLLSGKEFCRSRISVADPRLEEVV 897

[Close]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL
Match: A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)

HSP 1 Score: 925 bits (2390), Expect = 0.0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD
Sbjct: 456 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 515

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 516 IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 575

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR
Sbjct: 576 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 635

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL
Sbjct: 636 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 695

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 696 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 755

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 756 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 815

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES
Sbjct: 816 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 875

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRISLADHRLEETVY
Sbjct: 876 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 907

[Close]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL
Match: A0A5D3CBM0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10007G00030 PE=4 SV=1)

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 431/452 (95.35%), Postives = 441/452 (97.57%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 443 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 502

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 503 IVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 562

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGR
Sbjct: 563 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGR 622

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNIL
Sbjct: 623 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNIL 682

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 683 LKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 742

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 743 SYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCM 802

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           K+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NES
Sbjct: 803 KVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNES 862

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 863 PNPVFKNLLLSCKEFCRTRISVADHRLEETVH 894

[Close]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL
Match: A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 431/452 (95.35%), Postives = 441/452 (97.57%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 458 MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 517

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 518 IVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 577

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGR
Sbjct: 578 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGR 637

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNIL
Sbjct: 638 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNIL 697

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF
Sbjct: 698 LKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 757

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           SYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCM
Sbjct: 758 SYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCM 817

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           K+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NES
Sbjct: 818 KVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNES 877

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETVY 452
           PNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 878 PNPVFKNLLLSCKEFCRTRISVADHRLEETVH 909

[Close]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL
Match: A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)

HSP 1 Score: 828 bits (2138), Expect = 1.73e-294
Identity = 402/451 (89.14%), Postives = 426/451 (94.46%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG  EKWDPRLQPD
Sbjct: 447 MQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPD 506

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKN EGAFWVLQELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFR
Sbjct: 507 IVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFR 566

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGR
Sbjct: 567 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGR 626

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           C+EALMQMEKICKVANKPLVVTYTGLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NIL
Sbjct: 627 CEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNIL 686

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYL+HGMF+EA+ELFQN+SE  RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDF
Sbjct: 687 LKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDF 746

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
           S+FYNQM LYGYHFNPKRHLRMI+EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+
Sbjct: 747 SHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCI 806

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
            LARGDYSEALS I  H+S D HHFS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+S
Sbjct: 807 MLARGDYSEALSCISKHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDS 866

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETV 451
           PNPV +NLLLS KEFCR+RIS+AD RLEE V
Sbjct: 867 PNPVLQNLLLSGKEFCRSRISVADPRLEEVV 897

[Close]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL
Match: A0A6J1CLQ9 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012614 PE=4 SV=1)

HSP 1 Score: 823 bits (2125), Expect = 2.13e-292
Identity = 401/451 (88.91%), Postives = 422/451 (93.57%), Query Frame = 0


Query: 1   MQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPD 60
           MQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPD
Sbjct: 455 MQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPD 514

Query: 61  IVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFR 120
           IVIYNAVLNACVKRKN EGAFWVLQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFR
Sbjct: 515 IVIYNAVLNACVKRKNWEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFR 574

Query: 121 KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGR 180
           KVQ+SSIPNALTYKVLVNTL KEGKTDEAVLAI+NME RGIVGSAALYYDFARCLCSAGR
Sbjct: 575 KVQRSSIPNALTYKVLVNTLSKEGKTDEAVLAIQNMERRGIVGSAALYYDFARCLCSAGR 634

Query: 181 CKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNIL 240
           CKEALMQ+EKICKVANKPLVVTYTGLIQACLDSK+L SAVYIFNHMKAFCSPNLVTYNIL
Sbjct: 635 CKEALMQIEKICKVANKPLVVTYTGLIQACLDSKNLDSAVYIFNHMKAFCSPNLVTYNIL 694

Query: 241 LKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF 300
           LKGYL+HGMFEEARELFQNLSE  ++IST+SDY+DRVLPDIY FN MLDA FA KRWDDF
Sbjct: 695 LKGYLDHGMFEEARELFQNLSESGQSISTISDYKDRVLPDIYTFNIMLDAFFAVKRWDDF 754

Query: 301 SYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCM 360
            YFYNQMFLYGYHFNPKRHLRMILEA R GKDE+LETTWKHLAQ DRT PPPL+KERFCM
Sbjct: 755 GYFYNQMFLYGYHFNPKRHLRMILEAGRAGKDEILETTWKHLAQTDRTLPPPLVKERFCM 814

Query: 361 KLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNES 420
           KLARGDYSEALS I +H+S DAHHFSESAWLNLLKEK FP+DTVI LIHKV M+LT N  
Sbjct: 815 KLARGDYSEALSCISNHHSSDAHHFSESAWLNLLKEKGFPKDTVILLIHKVSMLLTGNHP 874

Query: 421 PNPVFKNLLLSCKEFCRTRISLADHRLEETV 451
           PNPVF+NLL SCKEFCRTRI++AD +LE+ V
Sbjct: 875 PNPVFQNLLSSCKEFCRTRITVADSKLEQIV 905

The following BLAST results are available for this feature:

BLAST of Cucsat.G8177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA76	2.8e-159	60.17	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop...	[more]
Q9FJW6	5.3e-86	39.46	Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop...	[more]
Q0WPZ6	4.1e-22	26.64	Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX...	[more]
Q9SR00	9.2e-22	25.15	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9LPX2	1.0e-20	25.09	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of Cucsat.G8177 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741862.1	0.0	100.00	pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sa...	[more]
KAA0047051.1	0.0	95.35	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387...	[more]
XP_008459122.1	0.0	95.35	PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic ...	[more]
XP_038894404.1	1.80e-308	92.90	pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 ...	[more]
XP_023519692.1	7.67e-296	89.80	pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ...	[more]

BLAST of Cucsat.G8177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVN7	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1	[more]
A0A5D3CBM0	0.0	95.35	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C8Z0	0.0	95.35	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ...	[more]
A0A6J1EH18	1.73e-294	89.14	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo...	[more]
A0A6J1CLQ9	2.13e-292	88.91	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..158 e-value: 2.2E-24 score: 88.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 12..57 e-value: 1.8E-10 score: 40.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 48..76 e-value: 2.4E-7 score: 28.5 coord: 14..41 e-value: 4.6E-4 score: 18.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 46..80 score: 10.785976
None	No IPR available	PANTHER	PTHR46935:SF1	OS01G0674700 PROTEIN	coord: 1..254
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 6.0
IPR044645	Pentatricopeptide repeat-containing protein DG1/EMB2279-like	PANTHER	PTHR46935	OS01G0674700 PROTEIN	coord: 1..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8177.T1	Cucsat.G8177.T1	mRNA
Cucsat.G8177.T7	Cucsat.G8177.T7	mRNA
Cucsat.G8177.T6	Cucsat.G8177.T6	mRNA
Cucsat.G8177.T8	Cucsat.G8177.T8	mRNA
Cucsat.G8177.T2	Cucsat.G8177.T2	mRNA
Cucsat.G8177.T3	Cucsat.G8177.T3	mRNA
Cucsat.G8177.T5	Cucsat.G8177.T5	mRNA
Cucsat.G8177.T4	Cucsat.G8177.T4	mRNA
Cucsat.G8177.T9	Cucsat.G8177.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding