Cucsat.G8177.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G8177.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg1557: 2224332 .. 2234549 (+)
RNA-Seq Expression	Cucsat.G8177.T3
Synteny	Cucsat.G8177.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCAATAGTAGGGAGGATACTATTTATCCAAATCCTCTTTTCTCTTTCCCCTCTCCGTCGGAGCCCCGTCGTTAGCCGCTGAAGGTCTACAAGCTCTCATCTACAATAGCGGCACGGAATTGCAGACGTCAGCTGTCAACTCATTTTTTTCACGCATCTTTTGAACTTATAAATTCTCTCTCTACCCACCACCGCCCATCGCCGGAGAAGGTGTGAACGGTTCTATATGTAATCACAGCACGGAATTGAAGAGAGGTTAACTATTATCTTGGCTTTCGGCGGAGAACTTGGTCGGTGCAACTTGCTAAAATGCGATCTGACCCGCAAATAGAACGGGCACAGCCGCGAATAATGGTTTAATCGTATCGCGATATTCAGGGCCAGGTTGCTCCGCCGTCATTTTGAAAAATACTTCAATTGGTGACCTACACAGAACAGTTAGTTTGTTTTTTCTTCTCTCTTTTACTTTTTGTGTGGAGATATTTACTCTGTGTTTCTACTTCGTGTCTCAGACTTCTTTTGGAGTATATTGGATTTATTCATGAAATTGGAGTTCTTTTGAAATGGTGGGAGTTATAATGGCGAACCTAAATTTGTGCATCCCTAATTGTGAAAGATATGGATTTCCGACACTGCATTGTACCCATAATTCCCACAATTCTTTTTGGGTTTCGTTCTTTCCTAGTTCGGTTTCTGGAACTGACTCAAGTCTTAGTGACGCGAAGAATAGAGTTTTGAGACATAGGGTTCATAAATGTGGATCAATTAAGGCTTTGTCGAATGGAGAATCTGATATTTCATTGCCAAGTGGGAATCTCCTCGAACATGATTTTCAATTTAAGCCATCGTTTGATGAATATGTGAAGGTCATGGAGACTGTTAGAACTAGAAGGTATAAGAGGCAGTTGGATGATCCTAATAAACTGACAATGAAGGAAAATGGGAGTGCAAAGAGTGCTGAGAGCACTTCCATTTCTAAGATAGATAATGGAAAAAACAAAGTAACTGATGTTCAACATAACGTGGACGTAAAGAACATGTTTAAACGGGTGGATAAAAAAGATTTGTTCAATAATACAGAGAGAATTGCTCCTGAAAAGGATTTGTCAGGAAATAAATTTGATAGAAGGAAGGTAGTTACAAGATCAAATGATAAGGTTAAAGGCAAGATGACCCCTTTTGGCTCACTGGTTAATGATAAACAACATGAAGAGAAAAGGAACGAAAACTGGTCAAGTTACATTGAGCCTAGAGTAACACGATCGAACAGCAAGAAACCAATTCATTTTAAAGCTAATACGTTGGAGGTCAAAAAAGAAAGCAGCCGTGTCTCTGATGGAAATTCCATGAAAACATCAGAAAAGATTTGGGCTTGGGGTGATGATGACGCTAAACCAGCTAAGGGTGTTCTTAAGGCTGGGAAATATGGCATTCAGCTCGAAAGAAGCTATAATCCTGGTGACAAGGTTGGTAGAAAGAAAACTGAGCAGTCCTACAGAGGGACATCCACAAGTGGTAAGCGTTTTCTTGAATTTAATGAAAAGAATAGCTTGGAGGTAGAACATGCAGCCTTCAACAATTTTGATGCATTCGACATAATGGACAAACCCAGAGTTTCAAAGATGGAAATGGAAGAGAGAATCCAGATGCTTTCTAAGAGGTTTGGTGTCCCTTGCTCACTTGTCTGTCTTGCTGAAAGTTTAAATTTGACTTGGTACAAGTCTGAAATCAAAACTATTACCTTATTCGATACTTCTTCTTTGTTTGGGCGGGGGTCTGTGAAATTAATATTCTTAATTTGTTAAATTTGAATTTCTTAACAACATTTCTACTAGGTATATGGGTGGACAAGGTTGTGTACTAGTTTTTTAATGGTTTTAAATATTTCCTTTTCTTGGCCAGGATATTTTATTGTTAAGTTCTTCAGGGTTGAGTTCAAGTATTTCTGGGGCCCGATTTTTAGTGTTATGTTTATTGAGCTTCAAGTCGTTTCTTTCTAAGGAAATTTTTAATTTAGTTTGAAGAGTATTAACTTCAGCTGCACCACTTATTCAATTTCAGACAATAGAGTCCAATCTAAGAACTTTGAAGTCTACTGAGCTAAATATTTGAGTGGTAAATGTGAAAGTTAGAAATCTACTTGCATTTGGTTATAACTCAACTCCATCGAGATAATATATGTTATTGGGTTCAAATGATGGTCATGAACTGTTTGCTTGCCTGCTGTTTTATGTTTTCTTTTTATCACTCACACATGTATTGCAGGCTCTTGAGTTATTCATTGTATGGAGACTTCTTTCATAGTCATCTCCAACATCTTTTAGGATTTGAAATTTAATTACTAATCTGCACTCAACTGTGCTATGAGGGGATTCCAAGAACACTAATCAAATTTCAATTATTTGAACTTTGAGGATTATTAATTAGTCTCTCCATATTAATTTATTTGAAGGACTTCCTTGTCAACAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGGTTTTTCCCTGTTTCTCACCTTTACTACTTGATTAATGTAGTGATAGTTCTAATAAAGTCCTTGGTTATGATGCCTTAAAAGAGTAAGAGTGGCCAGTGATGCCTTTCCTCGGTCTTGAAGTGCAATTTAGATTTTCTTTTTTATATTTGTAGTGTCTCAACCAACTTACATGCATTTCGGCTAATTTCACGAGACAATCCACCCGATCCTACAATATTTTGGTGTCAAGAAAACTCATAGAACATTAATTCTTTGGTAGGTGACCACTATATAATAAATCCACGACCTATTAGTTAGTTATTGAGACAATGTCTCCTTTTTACCACTAGGCCAACCTACGAGGGAGGATCAATGTTTTGAACGGCGCACTTGGGCACACGCCTAAGTGCAAGGCTCAACGGTGGTGCCTCGCCTCAGAAAGTTGAGGTGCATGAAATAAGGCACACGCCTTTCGGTGAATCACTTAAAATGTAAACTATTTTGCATTTTAGGGTTTCTGTTTGCCCATTTATTGTAAATATGTTTATACATATATAATTTTTAAACCTAATTTGGCATCATTTCTTAAAAAAATAGAACGTCTTTTCCTCTCCTTTCTCTCACCTTCTTCATTCTTCACTGTATCACCGTCTTCCTCTTCGTCTCCAATCTTCACTGAATCATCATTTACGGTGGATATCAAAGATTTAAAAGACCATCAAAATTATCTGGCACTTGATTCTTCTCCAAAATACAAAGGAATGCCAACATTCTTCCTGACCTCTTGGTCCTCCTCTCTTCAATTCTTCTAACTAAATCTTTTTTTTTTTTGTATAATCTTCTTTAAGTCCCATTTCTATCCATCTAAGTTTTGGTTGTGTAAATAAACATGTAAGTTTATAATGCCTAGGCTCCAGAGCCATTGGGCCTTGGGCATTTTAAGACACTGGGGAGGATAAAAAGGAAAGATAAAAGAGGAGAGAGAGAGGGGATATGGCCATCAGATTTTAAATTTAATCTCTTTTAAGAATATAAAGAAAGTGCTAAAGTATTGAATAATAAATTAAATTTAACTCATCACCCCCCCCCCCCCCCCCCCCACCCCCCACCCCCACACACCACACGATTAGGTACATTGCTGATTTAACATGGTATTAGAGCAAGAGGTCCCACTGTTCAAACTCCTAAAATATCATTTTTTCTTCAATTAATACTAATTTCTAATTTTCAAGCCCACAAGTGAAGGTGAGTATTAAAGTATTAATATAACTAAATTTATTTAAACCCATCAACTTAAGCTTTTTGAGTTTGTTGGGAATTTGTTAGATACCTAGATTAGTATACATGGTTTATCTTGTATAAGGGTAATTAGATTAGTGGGTGTAAGGGTAATTAGATACTTAGGAAGTTACTAGTCGTTATTGTGTAAGTGTGTTTACTAGTAGTTATTATTTAAGTGTGATTACTGGGGTTGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGAGGTTACTGTGGAGTGATTTGGGGTTTGGGTGAGAGTACTCAAGAGGGAGGTTCTAGGTGCCTTATACATGGGTTTATCTTGTATCTTCTTATAGTTCATTATAATAAATTAAGATCTTGTTAACAAGTATTCTTACAGAATTTAACAAAAAATCTTCATCCTAAGTTCCCAACATTTTCTAAAGAATCTTGCACCCACTAAAAAAAATTAATTAGAGAGAATTGAACCTTAATCTAATAATTTGTCCTCATCATTAATCAAATGAACTGGAAAGCTGCGATAATGCTGAAAAATAACTCAAATATGATAAAAACATCAGAAATCTTAAAATGGAAAAGATATTCACTTTCTTGCATTGCCCTGTCACCAAGTATGTTCTTTGACTAACAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGTAGGCAGTTAACTAACAACCTTCACTAGGATTTGCTGTCTTGGTCTGCGCACGTTTATGCAAGTGGATGCTGAAATTGACAGAATTTTTACTAACTCTGGTTGTGCCATCTCGGTTTCCCTTCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTGAGTCATAATTGGTAGATTATTTTATATTTTACAGGCAATATTTGGTTAATGTAATATACTGAGCAATTTTGTGGAAAAAAATGTTAAAGAGCAAAATAATCTTGTTATGGATATTTTCTGCTGTTTTGCTCGTAATATATTTATTCTTAGATCTGAGAATTCAAATATGACAATCATCTAGATTTTAGTGAATGTTTTGTTATCATTGTTCCATGATTGACGAAAGATTTAGATTTTGTACACATGGTTGGATTTCATTATTTTTCTTTTCCTTTTCCTTTTGGATAAAAGGCACCACTTCTAATTTGACAAATGAAAGGAATATAAAAAGAGGCATAGGAAAAAACTAGGCTCTACAACAAAATTGGGCAACCAAAAACGAGAGAAACACACATTAAGAACACTAATTCATCAGAAAAAGGAGAAAAATCCCAAAACAAATTGCAAAAACAACCTAATAGGGTCGAGTGAAGCTGAGAGTTAGTGGCAAATTTTTTTTTTTAAATTTGATTAATTAATTAATTAATATTATTATTGGTTTCTTCTGGTAGGAAATGTTAACATTTTTTTAGATGATATGAAATTACAGAGTTGATTCTTCAAAGCATTGTTTATTTTCTTTACGTTTTCACTTTCCATCTAACATACTGTTGCTATTTTCCTTTCTATTTTTTTCATAAAATTTTAAATTACTCAGTCATTAAGGCAAGTCTCCAGCATTGCTTCCTCCATTTGTTGCAAGGATATGTTTTTCTTCAAAACTTTTCTCATGTTTATTCATTATTACTATGAGATGCCAATAGAAACAACGTTATTTCCGAATTCTTTATGGAAATATATCTTGCATGGGTTTCTTTCAAGTTGTTCACTTGCAGTAGCCATTTTATTTCTTTCTTTCAGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTAGCTGGTCCTTTAATTTCTTTCTATTGTTCATGTAATTTGCAAGTCTATTTTGAAATTCAGAATGATTTTTCTAATGCTCGTTGCTTGAGATGCTGTGAATGAGAAATGCTTGATTTTGTGCACCCAAGAAGGAATGAACACTCATTAAGTTGCGTTGAATTCACTCAGTAACGTGTTAAATATTATTCTTACCTTTTGATTAGTAGAAAGTAAATGGTTTTGGGTATTGCATGGACACAGAGTGGACATATTGGGTTCTGAGTCTTTGAAGAGAATTAGTCGAAAGGTAGATTCTCTACCAAGTCCATGTTCCTAAACTTCACTAAGGGAGTTGCAAAAAATAATTATAGTCAACCTTATGTGGTACTGGAAGCTTAAAATTTCCAAGAAAGTAAAGATTTTCCTTTGGTCACTTGCTTATAGAAGTCTAAATATTCACAAGAAGCTTCAGAGAACGTTCCCTAATTGGTCCCTCTCCTCCATTTGCTGTCTTTTTCTTAGGGAGATGGAAACTATAGGTCACTTGTTCTTGCATTCTGAGTTTACTTTTAGAGGTTGGCAAATTCTCTTTAGTACTTTTGTGGTGGCTAGTTGCCTTCCTAAAAAAATCGATGATTGAATGATGGAAGTTTCTGCAGAAAAGGGAAAATCCTTCGGAGAAGTGCTACTCAAGTGCTTTTGTGGTTTCTTTGGAAAAAAAAAGAGAATAATACATTGTTTGACGATAATTTTGTTTCTTTTGATTTTTTTGGGCTTTTGTTCAACGTGCAACCTCTCGGTGATGTTCAAGCTACACCAATTTTTTTTTTCCAAAGCATTTCTATAACTATTCGCTATGAAACATTAATCTTAGTTGGATCCCCTTCCTTTAGTGGGGCTCTTTTTTTGTTGCGCTTGTTATTTTTTTCTATTTCCTTGTATTCTTTCATTTTTTCTCAATTAAAGTTGTTTCTATTAAAAAAAAAAAGAAGTTAGACCAAATTCTTTTTTAATTATAGCATTCTCATGATTATGAGCAATGGAGGGCTTTTCTCTATAGTTTTGTGGAGAGGTTTTCTCTACCCCTGCCTCTAGGCTGTTCTGGTAGCTCTTTTGATGAATATATATCTGTTTCTTATAAACAAAAAAGTCCTAACAGTGAATGGTAAGCCTAGAAAGAAAGAAGAAGATCTAGACCATCTTTTCAAGACATTGTTCAATAGGTATGAAAAACACCAATCTTTCGTGTTGTTTGCCTTATCCTTTCTCAATCAATCGCATATGAGTAAGTGCGTGCTTGGACTTGGTCAAGGATACATTTTATGGTTAGATTATGTAATCACTTATCACAAGCAGCTTTTGAACGATTACTTGCGTCTATCCTTCATAAAATATAAGTCACTTGATTGACGGTTATTCATGTGCACTGAAAATTATTGTTCACAAGTTCATGATTTTTTAAAAGAAACTTTAGTTCATGCACTGTTGAGAATGAATTAAGGTAACCCAATTTCTAAAACCTGTTATTTAATTATTTTCCCAAGTTCCTCTTTTCCCTGTGAAGCAAAAAAAGTTCGTTCTTTAAGTCGACTCTTAAACTGCCCCTAGATTTTCAATTTAGGTGAAGAAAAATAATTTGATCGGATGTTCTTCTACTATTAAAATTTGAAAGTCATGCTTCCATGACTTAATTTATTTGATTGTGCTGAAGTTACATTTTCATATGCAAGTAAGCCTATTGAAATTTTCTATTTACTGAATGAAACAGTTGAAATATTCTATTTACTGAACGAAACATTTTTCAATGAATGATAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGGTAGACTCGGTAGTCACAGTGTGTTTATTTGTTTCTTGTTATATATTTGCTTAATGGCTTGTCAAATTTCCAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGGTATTTCATAGTAAATTTTTGTTTTTTCTTTCAGCCTTTTATTTGTTTTTCCCTTTCTCATCCAACTTATATTTTATTTTTTCTCTTATGTGGATATATTATATATTACTATTGGTTATTTCCATGAGTTGGTTCAAAATGTTATCCCCTGAGTTTGAGCTCTATTTCCTAAGATGGGAGAAGTAGAAGTTGTTTATTATTTAAGAAGAAATTAGTCGACCTGACTCAATATGATAAGTCAAACAACATAGGATTTGGTTTCTCTTTATCACTCGCTCTTTTTGTTTAAAAAATACTGAATTTGAGGTTAACTAATCACCATATCTTAAAAATTCTCAAAACCTTTGAGTCTTTCTTAATCATGCCTACAATTTCATGATGAGCTTTATTGCCCCATAGTAATGTTTCTGCCTCAGACATCTCTTTCTGAGTGAATTTCTGGCTCCTTAATATTCTTGGCCTCTCCTTTGGGAGGTCAAATTTACTTCATAGTTCAAACTGTCTGGTTGCACATCCTGATTGCAGTCTGTTTACACGAATGATAATTAATGAATAGACCTCACGACGACCTTGTTATTGTTTACAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGTGGACCTTTTAAATTCAACGTCTTTTTCTTTCCTTGGTTCTCCTCCTTCCTTTCTACGTTTCTATATCTTTTTATATTGCACCACTAGCCTATTTTAAACGTGTATAGTTTAAGTTGGCTCTAGGAATGTTGCTTAATGCTTATAATTGACGATAGTTTTAAATATGCACATGCTAAAGAGATGTAATGATAATAATAGATAATATCATGAAACTATTGGAGGCTGAATTCGACCATTTTCCTATGACGTTTGACTTCTTAGGTGTATGACATTGATCATTTGTTGAAGTATTGAGAAAACAAAACGCTAAATCAATTTATTTTTTAATTGATCATGAAATTCAAGATTAAATTGTTCCTTGGCTATTAAGGGGTTCATAACTTCACATTCATGCTTAGAATTCGAGTTCTGCTTATACTAAGAAAAGAAACTATATTCCTTTATGATCTGTGGATGACTTGGTCTTAATTTCCTGCTCTACAAAAGGAATAAACTAAGATAAGTTGATCGCTTAGACTCATTATGGTTTTGCTTTCCTTTAACCATCGACTTCTGTTGTACAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAAAATGAAATCTAACCTGCTGCTATCACATATATATCTATCTATCTATATATATTTAGCATAATTTGAGAGGAAATAATTTTGTTTTATTCATTCTTTTGTCCTCAGTTTATGTATTACATAAAGGAACTAGAAAAGGAAAATCAATAATATTTGTACGAAGTTATTGTTGATTTGAAAAATAGAGTT

Coding sequence (CDS)

ATGGTGGGAGTTATAATGGCGAACCTAAATTTGTGCATCCCTAATTGTGAAAGATATGGATTTCCGACACTGCATTGTACCCATAATTCCCACAATTCTTTTTGGGTTTCGTTCTTTCCTAGTTCGGTTTCTGGAACTGACTCAAGTCTTAGTGACGCGAAGAATAGAGTTTTGAGACATAGGGTTCATAAATGTGGATCAATTAAGGCTTTGTCGAATGGAGAATCTGATATTTCATTGCCAAGTGGGAATCTCCTCGAACATGATTTTCAATTTAAGCCATCGTTTGATGAATATGTGAAGGTCATGGAGACTGTTAGAACTAGAAGGTATAAGAGGCAGTTGGATGATCCTAATAAACTGACAATGAAGGAAAATGGGAGTGCAAAGAGTGCTGAGAGCACTTCCATTTCTAAGATAGATAATGGAAAAAACAAAGTAACTGATGTTCAACATAACGTGGACGTAAAGAACATGTTTAAACGGGTGGATAAAAAAGATTTGTTCAATAATACAGAGAGAATTGCTCCTGAAAAGGATTTGTCAGGAAATAAATTTGATAGAAGGAAGGTAGTTACAAGATCAAATGATAAGGTTAAAGGCAAGATGACCCCTTTTGGCTCACTGGTTAATGATAAACAACATGAAGAGAAAAGGAACGAAAACTGGTCAAGTTACATTGAGCCTAGAGTAACACGATCGAACAGCAAGAAACCAATTCATTTTAAAGCTAATACGTTGGAGGTCAAAAAAGAAAGCAGCCGTGTCTCTGATGGAAATTCCATGAAAACATCAGAAAAGATTTGGGCTTGGGGTGATGATGACGCTAAACCAGCTAAGGGTGTTCTTAAGGCTGGGAAATATGGCATTCAGCTCGAAAGAAGCTATAATCCTGGTGACAAGGTTGGTAGAAAGAAAACTGAGCAGTCCTACAGAGGGACATCCACAAGTGGTAAGCGTTTTCTTGAATTTAATGAAAAGAATAGCTTGGAGGTAGAACATGCAGCCTTCAACAATTTTGATGCATTCGACATAATGGACAAACCCAGAGTTTCAAAGATGGAAATGGAAGAGAGAATCCAGATGCTTTCTAAGAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAA

Protein sequence

MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETVY

Homology

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot
Match: Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 2.6e-209
Identity = 446/997 (44.73%), Postives = 599/997 (60.08%), Query Frame = 0


Query: 30   SHNSFWVSFFPSSVSGTDSSLSDAKNRVLRHRVHKCGSIKALSNGESDISLPSGNLLEHD 89
            S NSFW   F          +    +R L  +V  C +   L+  E  +  P     +  
Sbjct: 19   SRNSFWRPLFHQPYYNC-RRVVRLNSRKLNSKVMFCLN---LNTKEVGLQKPG----DKG 78

Query: 90   FQFKPSFDEYVKVMETVRTRRYKRQLDDPNKLTMKEN----GSAKSAESTSISKIDNGKN 149
            F+FKPSFD+Y+++ME+V+T R K++ D   +L ++E+    G+  S       KI +G+ 
Sbjct: 79   FEFKPSFDQYLQIMESVKTARKKKKFD---RLKVEEDDGGGGNGDSVYEVKDMKIKSGEL 138

Query: 150  K-------------VTD------VQHNVDVKNMFKRVDKKDLFNNTERIAPEKDLSG--- 209
            K             V+D       + N +++N     D K   +    +A +   SG   
Sbjct: 139  KDETFRKRYSRQEIVSDKRNERVFKRNGEIENHRVATDLKWSKSGESSVALKLSKSGESS 198

Query: 210  ---------NKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNE------------- 269
                      K   ++   RS+D  +G          D   EE+R +             
Sbjct: 199  VTVPEDESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLVVEERRVQRIAKDARWSKSRE 258

Query: 270  -----NWSSYIEPRVT--------RSNSKKPIHFKANT------------LEVKKESSRV 329
                  WS+  E  VT        R  SK+  H  ++T            LE+  E  RV
Sbjct: 259  SSVAVKWSNSGESSVTMPKDESFRRRYSKQEHHRSSDTSRGIARGSKGDELELVVEERRV 318

Query: 330  ----SDGNSMKTSEKIWAWGDDD-----------------AKPAKGVLKAGK-YGIQLER 389
                 D    K+ E +    +D+                 +  ++G+ +  K  G+ L  
Sbjct: 319  QRIAKDVRWSKSDESLVPVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGDGLDLLA 378

Query: 390  SYNPGDKVGRKKTE---QSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFD-AFDIMDKPR 449
                 +++  ++ E       GT   G +  + ++ +   +E  AF   D + DI+DKP 
Sbjct: 379  EERRIERLANERHEIRSSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPA 438

Query: 450  VSKMEMEERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRR 509
             S++EME+RI+ L+K LNGADI+MPEW FS+ +RSAKIRY+D++++R+I  LGKLGNWRR
Sbjct: 439  TSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRR 498

Query: 510  VLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYH 569
            VLQ+IEWLQ ++R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM    SSYPD+VAY 
Sbjct: 499  VLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYR 558

Query: 570  SIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRK 629
            SIAVTLGQAG+++ELF VID+MRSPPKKKFK   LEKWDPRL+PD+V+YNAVLNACV+RK
Sbjct: 559  SIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRK 618

Query: 630  NLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKV 689
              EGAFWVLQ+LK++  +PS  TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+V
Sbjct: 619  QWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRV 678

Query: 690  LVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEAL---------- 749
            LVNTLWKEGK+DEAV  +E+ME RGIVGSAALYYD ARCLCSAGRC E L          
Sbjct: 679  LVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVV 738

Query: 750  ------------------MQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK 809
                               Q++KIC+VANKPLVVTYTGLIQAC+DS ++++A YIF+ MK
Sbjct: 739  LKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMK 798

Query: 810  AFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTM 869
              CSPNLVT NI+LK YL+ G+FEEARELFQ +SE   +I   SD+  RVLPD Y FNTM
Sbjct: 799  KVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTM 858

Query: 870  LDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADR 895
            LD    +++WDDF Y Y +M  +GYHFN KRHLRM+LEA+R GK+E++E TW+H+ +++R
Sbjct: 859  LDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNR 918

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot
Match: Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-106
Identity = 207/546 (37.91%), Postives = 326/546 (59.71%), Query Frame = 0


Query: 358 ERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEW 417
           E +++L  RL+G +I+   W F +MM  + +++++  +L+++  LG+  +W++   ++ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242

Query: 418 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 477
           +   ++ K  + RF+YT  L VLG ARRP EAL +F+ M      YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302

Query: 478 QAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 537
           QAG ++EL  VI+ MR  P K  K    + WDP L+PD+V+YNA+LNACV     +   W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362

Query: 538 VLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLW 597
           V  EL+K  L+P+ +TYGL MEVMLE GK++ VH+FFRK++ S   P A+TYKVLV  LW
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422

Query: 598 KEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVAN-KPLV 657
           +EGK +EAV A+ +ME +G++G+ ++YY+ A CLC+ GR  +A++++ ++ ++ N +PL 
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482

Query: 658 VTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNL 717
           +T+TGLI A L+   +   + IF +MK  C PN+ T N++LK Y  + MF EA+ELF+ +
Sbjct: 483 ITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI 542

Query: 718 SEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHL 777
                    VS     ++P+ Y ++ ML+AS    +W+ F + Y  M L GY  +  +H 
Sbjct: 543 ---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHA 602

Query: 778 RMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSG 837
            M++EA+R GK  LLE  +  + +    P P    E  C   A+GD+  A++ I +  + 
Sbjct: 603 SMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLI-NTVAL 662

Query: 838 DAHHFSESAWLNLLKEKR--FPRDTVIELIHKVG-MVLTRNESPNPVFKNLLLSCKEFCR 897
            +   SE  W +L +E +    +D     +HK+   ++  +    P   NL  S K  C 
Sbjct: 663 ASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRCG 714

Query: 898 TRISLA 899
           +  S A
Sbjct: 723 SSSSSA 714

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot
Match: Q9FMD3 (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.7e-22
Identity = 77/314 (24.52%), Postives = 145/314 (46.18%), Query Frame = 0


Query: 432 IYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 491
           IY T +D L K+++   AL++ + M++     PD+V Y+S+   L  +G   +   ++  
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSC 247

Query: 492 MRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPST 551
           M                   + PD+  +NA+++ACVK   +  A    +E+ ++SL P  
Sbjct: 248 MTK---------------REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 307

Query: 552 STYGLVMEVMLECGKYNLVHEFFR-KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIEN 611
            TY L++  +    + +   E F   V K   P+ +TY +L+N   K  K +  +     
Sbjct: 308 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 367

Query: 612 MEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKD 671
           M  RG+V +   Y    +  C AG+   A     ++      P ++TY  L+    D+  
Sbjct: 368 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 427

Query: 672 LQSAVYIFNHM-KAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYR 731
           ++ A+ I   M K     ++VTYNI+++G  + G   +A +++ +L+ Q           
Sbjct: 428 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ----------- 473

Query: 732 DRVLPDIYMFNTML 744
             ++PDI+ + TM+
Sbjct: 488 -GLMPDIWTYTTMM 473

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot
Match: Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.3e-22
Identity = 57/214 (26.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 510 PRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNL 569
           P  +P + +YN +L +C+K + +E   W+ +++    + P T T+ L++  + +    + 
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165

Query: 570 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFAR 629
             E F ++ +K   PN  T+ +LV    K G TD+ +  +  ME  G++ +  +Y     
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225

Query: 630 CLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK-----A 689
             C  GR  ++   +EK+ +    P +VT+   I A      +  A  IF+ M+      
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 690 FCSPNLVTYNILLKGYLEHGMFEEARELFQNLSE 718
              PN +TYN++LKG+ + G+ E+A+ LF+++ E
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-21
Identity = 86/342 (25.15%), Postives = 146/342 (42.69%), Query Frame = 0


Query: 491 SMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPS 550
           ++R+ PK      +LEK+    QPD+  YNA++N   K   ++ A  VL  ++ +   P 
Sbjct: 136 TLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD 195

Query: 551 TSTYGLVMEVMLECGKYNLVHEFFRKVQKSSI-PNALTYKVLVNTLWKEGKTDEAVLAIE 610
           T TY +++  +   GK +L  +   ++   +  P  +TY +L+     EG  DEA+  ++
Sbjct: 196 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 255

Query: 611 NMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 670
            M  RG+      Y    R +C  G    A   +  +     +P V++Y  L++A L+  
Sbjct: 256 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 315

Query: 671 DLQSAVYIFNHM-KAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDY 730
             +    +   M    C PN+VTY+IL+      G  EEA  L + + E+          
Sbjct: 316 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK---------- 375

Query: 731 RDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGK-D 790
              + PD Y ++ ++ A   E R D    F   M   G   +   +  ++    + GK D
Sbjct: 376 --GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 435

Query: 791 ELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSI 830
           + LE   K L +   +P        F    + GD   AL  I
Sbjct: 436 QALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461

[Close]

BLAST of Cucsat.G8177.T3 vs. NCBI nr
Match: XP_031741862.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >XP_031741863.1 pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >KGN65965.1 hypothetical protein Csa_023210 [Cucumis sativus])

HSP 1 Score: 1825 bits (4728), Expect = 0.0
Identity = 907/907 (100.00%), Postives = 907/907 (100.00%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH
Sbjct: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK
Sbjct: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
           LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180

Query: 181 LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI 240
           LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI
Sbjct: 181 LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI 240

Query: 241 HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD 300
           HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD
Sbjct: 241 HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD 300

Query: 301 KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI 360
           KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI
Sbjct: 301 KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI 360

Query: 361 QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 420
           QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM
Sbjct: 361 QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 420

Query: 421 RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 480
           RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG
Sbjct: 421 RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 480

Query: 481 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 540
           YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ
Sbjct: 481 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 540

Query: 541 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 600
           ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK
Sbjct: 541 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 600

Query: 601 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 660
           TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG
Sbjct: 601 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 660

Query: 661 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 720
           LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR
Sbjct: 661 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 720

Query: 721 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 780
           NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE
Sbjct: 721 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 780

Query: 781 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 840
           AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF
Sbjct: 781 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 840

Query: 841 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 900
           SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH
Sbjct: 841 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 900

Query: 901 RLEETVY 907
           RLEETVY
Sbjct: 901 RLEETVY 907

[Close]

BLAST of Cucsat.G8177.T3 vs. NCBI nr
Match: XP_008459122.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis melo])

HSP 1 Score: 1714 bits (4440), Expect = 0.0
Identity = 853/909 (93.84%), Postives = 875/909 (96.26%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSG--TDSSLSDAKNRVL 60
           MVGVIMAN+NL IPNCERYGFPTLHCTHNSH SFWVSFFPSSVSG  TD + SDAKNRVL
Sbjct: 1   MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60

Query: 61  RHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDP 120
           RHR+HKCGSIKALSNGESDISLP+GNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLD P
Sbjct: 61  RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120

Query: 121 NKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPE 180
           NKLTMKEN SAKSAESTSISKIDNGKNKVTDVQHNV+VKNMFKRVDKKDLFNNTERIA E
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180

Query: 181 KDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKK 240
           K LSGNKFDR K VTRSNDKVKGKMTPFGSLVNDKQHEEK+N NWSSYIEP+VTRSN +K
Sbjct: 181 KHLSGNKFDRSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCEK 240

Query: 241 PIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNP 300
           PIHFKAN LE KKE SRVS GNSMKTSEKIWAWG+DDAKPAK VLKAGKYGIQLERSY+P
Sbjct: 241 PIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYSP 300

Query: 301 GDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEE 360
           GDKVGRKKTEQSYRGTSTSGKRFLEF E+NSLEVEHAAFNNFDA DIMDKPRVSKMEMEE
Sbjct: 301 GDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEMEE 360

Query: 361 RIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWL 420
           RIQMLSKRLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWL
Sbjct: 361 RIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWL 420

Query: 421 QMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ 480
           QMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ
Sbjct: 421 QMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ 480

Query: 481 AGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV 540
           AGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV
Sbjct: 481 AGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV 540

Query: 541 LQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE 600
           LQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE
Sbjct: 541 LQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE 600

Query: 601 GKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY 660
           GKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY
Sbjct: 601 GKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY 660

Query: 661 TGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQ 720
           TGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQ
Sbjct: 661 TGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQ 720

Query: 721 RRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI 780
           R+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI
Sbjct: 721 RQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI 780

Query: 781 LEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAH 840
           LEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAH
Sbjct: 781 LEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAH 840

Query: 841 HFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLA 900
           HFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+A
Sbjct: 841 HFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVA 900

Query: 901 DHRLEETVY 907
           DHRLEETV+
Sbjct: 901 DHRLEETVH 909

[Close]

BLAST of Cucsat.G8177.T3 vs. NCBI nr
Match: KAA0047051.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1620 bits (4196), Expect = 0.0
Identity = 816/882 (92.52%), Postives = 837/882 (94.90%), Query Frame = 0


Query: 41  SSVSG--TDSSLSDAKNRVLRHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDE 100
           SSVSG  TD + SDAKNRVLRHR+HKCGSIKALSNGESDISLP+GNLLEHDFQFKPSFDE
Sbjct: 13  SSVSGGGTDLNFSDAKNRVLRHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDE 72

Query: 101 YVKVMETVRTRRYKRQLDDPNKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKN 160
           YVKVMETVRTRRYKRQLD PNKLTMKEN SAKSAESTSISKIDNGKNKVTDVQHNV+VKN
Sbjct: 73  YVKVMETVRTRRYKRQLDYPNKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKN 132

Query: 161 MFKRVDKKDLFNNTERIAPEKDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEK 220
           MFKRVDKKDLFNNTERIA EK LSGNKFDR K VTRSNDKVKGKMTPFGSLVNDKQHEEK
Sbjct: 133 MFKRVDKKDLFNNTERIAREKHLSGNKFDRSKGVTRSNDKVKGKMTPFGSLVNDKQHEEK 192

Query: 221 RNENWSSYIEPRVTRSNSKKPIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKP 280
           +N NWSSYIEP+VTRSN +KPIHFKAN LE KKE SRVS GNSMKTSEKIWAWG+DDAKP
Sbjct: 193 KNGNWSSYIEPKVTRSNCEKPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKP 252

Query: 281 AKGVLKAGKYGIQLERSYNPGDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFN 340
           AK VLKAGKYGIQLERSY+PGDKVGRKKTEQSYRGTSTSGKRFLEF E+NSLEVEHAAFN
Sbjct: 253 AKDVLKAGKYGIQLERSYSPGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFN 312

Query: 341 NFDAFDIMDKPRVSKMEMEERIQMLSKR-------------LNGADIDMPEWMFSQMMRS 400
           NFDA DIMDKPRVSKMEMEERIQMLSKR             LNGADIDMPEWMFSQMMR 
Sbjct: 313 NFDALDIMDKPRVSKMEMEERIQMLSKRFGVPCSLDFLVNRLNGADIDMPEWMFSQMMRG 372

Query: 401 AKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARR 460
           AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQMRERFKSHK RFIYTTALDVLGKARR
Sbjct: 373 AKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMRERFKSHKPRFIYTTALDVLGKARR 432

Query: 461 PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVL 520
           PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG L
Sbjct: 433 PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGAL 492

Query: 521 EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECG 580
           EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECG
Sbjct: 493 EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECG 552

Query: 581 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYD 640
           KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYD
Sbjct: 553 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYD 612

Query: 641 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFC 700
           FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFC
Sbjct: 613 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFC 672

Query: 701 SPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDA 760
           SPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDA
Sbjct: 673 SPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDA 732

Query: 761 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPP 820
           SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPP
Sbjct: 733 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPP 792

Query: 821 PPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHK 880
           PPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHK
Sbjct: 793 PPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHK 852

Query: 881 VGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETVY 907
           VGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 853 VGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRLEETVH 894

[Close]

BLAST of Cucsat.G8177.T3 vs. NCBI nr
Match: XP_038894404.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1583 bits (4100), Expect = 0.0
Identity = 792/907 (87.32%), Postives = 840/907 (92.61%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMAN+NLCIP+CER GFP LHCT NSHN F  SFFPSSVSG D +  DAK+RVLRH
Sbjct: 1   MVGVIMANVNLCIPSCERNGFPALHCTQNSHNFFGFSFFPSSVSGPDLNFGDAKHRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           RVHKCGSIKA SNGESDI LPS NLLE+DFQFKPSFDEYV+VMETVRTRRYKRQ DDPNK
Sbjct: 61  RVHKCGSIKASSNGESDIRLPSENLLENDFQFKPSFDEYVRVMETVRTRRYKRQSDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
           LTMKEN S KSAE TSISKIDNGKNKVTDVQ NVDVKNMFKRVD+KDLFNNTERI  E+D
Sbjct: 121 LTMKENASVKSAEITSISKIDNGKNKVTDVQGNVDVKNMFKRVDRKDLFNNTERITRERD 180

Query: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
           LSGNK D +RK ++RSND+VKGK+TPF S VNDKQHEEKRN N S+Y EP+V R  ++K 
Sbjct: 181 LSGNKIDSKRKGISRSNDEVKGKVTPFDSQVNDKQHEEKRNINRSNYTEPKVPRLYNEKR 240

Query: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
           I+FKANTL++K+ES R S+G+SM+ S KIWA  +DD KPAK +L A KY +QLER+Y  G
Sbjct: 241 INFKANTLDIKRESHRASNGSSMRISGKIWA--NDDTKPAKDILNAVKYSVQLERNYISG 300

Query: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
           DKVGRKKTEQSYR +S SGKRFLEF E +SLEVEHAAFNNFDA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRESSKSGKRFLEFTEDSSLEVEHAAFNNFDALDIMDKPRVSKMEMEER 360

Query: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
           IQML KRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQ
Sbjct: 361 IQMLCKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQ 420

Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
           MRERFKSHKLRFIYTTALDVLGKARRPVEALN+FHAMQ+HF+SYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNLFHAMQQHFTSYPDLVAYHSIAVTLGQA 480

Query: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
           GYM+ELFDVIDSMRSPPKKKFKTGVLEKWDPRL+PDIVIYNAVLNACVKRKNLEGAFWVL
Sbjct: 481 GYMKELFDVIDSMRSPPKKKFKTGVLEKWDPRLEPDIVIYNAVLNACVKRKNLEGAFWVL 540

Query: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
           QELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600

Query: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
           KTDEAVLAIENME RGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA KPLVVTYT
Sbjct: 601 KTDEAVLAIENMERRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVATKPLVVTYT 660

Query: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
           GLIQACLDSKD++SAVYIFNHMK FCSPNLVTYN+LLKGYLEHGMFEEARELFQNLSE  
Sbjct: 661 GLIQACLDSKDIRSAVYIFNHMKTFCSPNLVTYNMLLKGYLEHGMFEEARELFQNLSEHG 720

Query: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
           RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF YFY+QM LYGYHFNPKRHLRMIL
Sbjct: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFGYFYDQMLLYGYHFNPKRHLRMIL 780

Query: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
           EAAR GKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALS I +H+S D HH
Sbjct: 781 EAARAGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSCISNHDSSDVHH 840

Query: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
           FSES WLNLLKEKRFP+DTVI+LI+KV M+LTRN+ PNPVFKNLLLSCKEFCRTRIS+AD
Sbjct: 841 FSESGWLNLLKEKRFPKDTVIQLINKVSMLLTRNDLPNPVFKNLLLSCKEFCRTRISVAD 900

Query: 901 HRLEETV 906
           HRLEETV
Sbjct: 901 HRLEETV 905

[Close]

BLAST of Cucsat.G8177.T3 vs. NCBI nr
Match: KAG7019446.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1490 bits (3858), Expect = 0.0
Identity = 754/907 (83.13%), Postives = 811/907 (89.42%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMAN NLCIP CE  GFP L+CT NSH     SFFPSSVSG+  +   AK+RVLRH
Sbjct: 1   MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           R HKCG+IKA S GESDI L SGNLLE DFQFKPSFDEYV+VME+VR+RRYKRQ DDPNK
Sbjct: 61  RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
             MKEN SAKSAESTSIS I      VTDVQ N+DVKN    VD +DLF+N+E+I  + D
Sbjct: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180

Query: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
           LSGNKFD +RK VTRS D++KGK+TPF S VNDKQHEEKRN NWS+YIEP+ TRSN  K 
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240

Query: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
           +HFKANTL+VK ES  V  G+SMK S+KIWA  DDD KP K VLK GKYG+QLE +Y PG
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWA--DDDTKPTKDVLKVGKYGVQLEGNYIPG 300

Query: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
           DKVGRKKTEQSYRG S SGKRF EF E++SLEVEHAAFN+FDA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEER 360

Query: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
           IQMLSKRLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQ 420

Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
           MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480

Query: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
           GYMRELFDVIDSMRSPPKKKFKTG  EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVL 540

Query: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
           QELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600

Query: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
           KTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYT
Sbjct: 601 KTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYT 660

Query: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
           GLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE  
Sbjct: 661 GLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENG 720

Query: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
           RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+
Sbjct: 721 RNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIM 780

Query: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
           EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I  H+S D HH
Sbjct: 781 EAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHH 840

Query: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
           FS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RI++AD
Sbjct: 841 FSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVAD 897

Query: 901 HRLEETV 906
            RLEE V
Sbjct: 901 PRLEEVV 897

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL
Match: A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)

HSP 1 Score: 1825 bits (4728), Expect = 0.0
Identity = 907/907 (100.00%), Postives = 907/907 (100.00%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH
Sbjct: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK
Sbjct: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
           LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180

Query: 181 LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI 240
           LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI
Sbjct: 181 LSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKPI 240

Query: 241 HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD 300
           HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD
Sbjct: 241 HFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD 300

Query: 301 KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI 360
           KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI
Sbjct: 301 KVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEERI 360

Query: 361 QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 420
           QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM
Sbjct: 361 QMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 420

Query: 421 RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 480
           RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG
Sbjct: 421 RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 480

Query: 481 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 540
           YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ
Sbjct: 481 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 540

Query: 541 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 600
           ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK
Sbjct: 541 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 600

Query: 601 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 660
           TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG
Sbjct: 601 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 660

Query: 661 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 720
           LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR
Sbjct: 661 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 720

Query: 721 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 780
           NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE
Sbjct: 721 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 780

Query: 781 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 840
           AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF
Sbjct: 781 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 840

Query: 841 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 900
           SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH
Sbjct: 841 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 900

Query: 901 RLEETVY 907
           RLEETVY
Sbjct: 901 RLEETVY 907

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL
Match: A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)

HSP 1 Score: 1714 bits (4440), Expect = 0.0
Identity = 853/909 (93.84%), Postives = 875/909 (96.26%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSG--TDSSLSDAKNRVL 60
           MVGVIMAN+NL IPNCERYGFPTLHCTHNSH SFWVSFFPSSVSG  TD + SDAKNRVL
Sbjct: 1   MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60

Query: 61  RHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDP 120
           RHR+HKCGSIKALSNGESDISLP+GNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLD P
Sbjct: 61  RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120

Query: 121 NKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPE 180
           NKLTMKEN SAKSAESTSISKIDNGKNKVTDVQHNV+VKNMFKRVDKKDLFNNTERIA E
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180

Query: 181 KDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKK 240
           K LSGNKFDR K VTRSNDKVKGKMTPFGSLVNDKQHEEK+N NWSSYIEP+VTRSN +K
Sbjct: 181 KHLSGNKFDRSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCEK 240

Query: 241 PIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNP 300
           PIHFKAN LE KKE SRVS GNSMKTSEKIWAWG+DDAKPAK VLKAGKYGIQLERSY+P
Sbjct: 241 PIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYSP 300

Query: 301 GDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEE 360
           GDKVGRKKTEQSYRGTSTSGKRFLEF E+NSLEVEHAAFNNFDA DIMDKPRVSKMEMEE
Sbjct: 301 GDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEMEE 360

Query: 361 RIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWL 420
           RIQMLSKRLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWL
Sbjct: 361 RIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWL 420

Query: 421 QMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ 480
           QMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ
Sbjct: 421 QMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ 480

Query: 481 AGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV 540
           AGYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV
Sbjct: 481 AGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV 540

Query: 541 LQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE 600
           LQELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE
Sbjct: 541 LQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE 600

Query: 601 GKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY 660
           GKTDEAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY
Sbjct: 601 GKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY 660

Query: 661 TGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQ 720
           TGLIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQ
Sbjct: 661 TGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQ 720

Query: 721 RRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI 780
           R+NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI
Sbjct: 721 RQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI 780

Query: 781 LEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAH 840
           LEAAR GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAH
Sbjct: 781 LEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAH 840

Query: 841 HFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLA 900
           HFSESAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+A
Sbjct: 841 HFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVA 900

Query: 901 DHRLEETVY 907
           DHRLEETV+
Sbjct: 901 DHRLEETVH 909

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL
Match: A0A5D3CBM0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10007G00030 PE=4 SV=1)

HSP 1 Score: 1620 bits (4196), Expect = 0.0
Identity = 816/882 (92.52%), Postives = 837/882 (94.90%), Query Frame = 0


Query: 41  SSVSG--TDSSLSDAKNRVLRHRVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDE 100
           SSVSG  TD + SDAKNRVLRHR+HKCGSIKALSNGESDISLP+GNLLEHDFQFKPSFDE
Sbjct: 13  SSVSGGGTDLNFSDAKNRVLRHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDE 72

Query: 101 YVKVMETVRTRRYKRQLDDPNKLTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKN 160
           YVKVMETVRTRRYKRQLD PNKLTMKEN SAKSAESTSISKIDNGKNKVTDVQHNV+VKN
Sbjct: 73  YVKVMETVRTRRYKRQLDYPNKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKN 132

Query: 161 MFKRVDKKDLFNNTERIAPEKDLSGNKFDRRKVVTRSNDKVKGKMTPFGSLVNDKQHEEK 220
           MFKRVDKKDLFNNTERIA EK LSGNKFDR K VTRSNDKVKGKMTPFGSLVNDKQHEEK
Sbjct: 133 MFKRVDKKDLFNNTERIAREKHLSGNKFDRSKGVTRSNDKVKGKMTPFGSLVNDKQHEEK 192

Query: 221 RNENWSSYIEPRVTRSNSKKPIHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKP 280
           +N NWSSYIEP+VTRSN +KPIHFKAN LE KKE SRVS GNSMKTSEKIWAWG+DDAKP
Sbjct: 193 KNGNWSSYIEPKVTRSNCEKPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKP 252

Query: 281 AKGVLKAGKYGIQLERSYNPGDKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFN 340
           AK VLKAGKYGIQLERSY+PGDKVGRKKTEQSYRGTSTSGKRFLEF E+NSLEVEHAAFN
Sbjct: 253 AKDVLKAGKYGIQLERSYSPGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFN 312

Query: 341 NFDAFDIMDKPRVSKMEMEERIQMLSKR-------------LNGADIDMPEWMFSQMMRS 400
           NFDA DIMDKPRVSKMEMEERIQMLSKR             LNGADIDMPEWMFSQMMR 
Sbjct: 313 NFDALDIMDKPRVSKMEMEERIQMLSKRFGVPCSLDFLVNRLNGADIDMPEWMFSQMMRG 372

Query: 401 AKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARR 460
           AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQMRERFKSHK RFIYTTALDVLGKARR
Sbjct: 373 AKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMRERFKSHKPRFIYTTALDVLGKARR 432

Query: 461 PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVL 520
           PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTG L
Sbjct: 433 PVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGAL 492

Query: 521 EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECG 580
           EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQ LQPSTSTYGLVMEVMLECG
Sbjct: 493 EKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEVMLECG 552

Query: 581 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYD 640
           KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME+RG+VGSAALYYD
Sbjct: 553 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALYYD 612

Query: 641 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFC 700
           FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MKAFC
Sbjct: 613 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKAFC 672

Query: 701 SPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDA 760
           SPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+NISTVSDYRDRVLPDIYMFNTMLDA
Sbjct: 673 SPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTMLDA 732

Query: 761 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPP 820
           SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAAR GKDELLETTWKHLAQADRTPP
Sbjct: 733 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRTPP 792

Query: 821 PPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHK 880
           PPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHFSESAWLNLLKEKRFP+DTVIELIHK
Sbjct: 793 PPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELIHK 852

Query: 881 VGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETVY 907
           VGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADHRLEETV+
Sbjct: 853 VGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRLEETVH 894

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL
Match: A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)

HSP 1 Score: 1481 bits (3835), Expect = 0.0
Identity = 751/907 (82.80%), Postives = 808/907 (89.08%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMAN NLCIP CE  GFP L+CT NSH     S FPSSVSG+  +   AK+RVLRH
Sbjct: 1   MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           R HKCG+IKA S GESDI L SGNLLE DFQFKPSFDEYV+VME+VR+RRYKRQ DDPNK
Sbjct: 61  RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
             MKEN SAKSAEST IS I      VTDVQ N+DVKN    VD +DLF+N+E+I  + D
Sbjct: 121 --MKENASAKSAESTFISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180

Query: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
           LSGNKFD +RK VTRS D++KGK+TPF S VNDKQHEEKRN NWS+YIEP+ TRSN  K 
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240

Query: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
           +HFKANTL+VK ES  V  G+SMK S+KIWA  DDD+KP K VLK GKYG+QLE +Y PG
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWA--DDDSKPTKDVLKVGKYGVQLEGNYIPG 300

Query: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
           DKVGRKKTEQSYRG S SGKRF EF E++SLEVEHAAFN+ DA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEER 360

Query: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
           IQMLS RLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQ
Sbjct: 361 IQMLSNRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQ 420

Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
           MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480

Query: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
           GYMRELFDVIDSMRSPPKKKFKTG  EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVL 540

Query: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
           QELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600

Query: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
           KTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYT
Sbjct: 601 KTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYT 660

Query: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
           GLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE  
Sbjct: 661 GLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENG 720

Query: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
           RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+
Sbjct: 721 RNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIM 780

Query: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
           EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I  H+S D HH
Sbjct: 781 EAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHH 840

Query: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
           FS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RIS+AD
Sbjct: 841 FSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVAD 897

Query: 901 HRLEETV 906
            RLEE V
Sbjct: 901 PRLEEVV 897

[Close]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL
Match: A0A6J1KEH7 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495096 PE=4 SV=1)

HSP 1 Score: 1480 bits (3831), Expect = 0.0
Identity = 751/907 (82.80%), Postives = 808/907 (89.08%), Query Frame = 0


Query: 1   MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
           MVGVIMAN NLCIP CE  GF  L+CT NSH    +SFFPSSVSG+  +   AK+RVLRH
Sbjct: 1   MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60

Query: 61  RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
           R HKCG+IKA S GESDI L SGNLLE DFQFKPSFDEYV+VME+VR+RRYKRQ DDPNK
Sbjct: 61  RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120

Query: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
             MKEN SAKSAESTSIS I      VTDVQ N+DVKN    VD +DLF+N+ERI  + D
Sbjct: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTD 180

Query: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
           LSGNKFD +RK VTRS D++KGK+TPF S +NDKQHEEKRN NWS+YIEP+VTRSN  K 
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKR 240

Query: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
           +HFKANTL+VK ES  V  G+SMK SEKIWA  DDD KP K VLK GKYG+QL+ +Y PG
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISEKIWA--DDDIKPTKDVLKVGKYGVQLKGNYIPG 300

Query: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
           DKVGRKKTEQSYRG S SGKRF EF E++SLEVEHAAFN+ DA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEER 360

Query: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
           IQMLSKRLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQ 420

Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
           MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480

Query: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
           GYMRELFDVIDSMRSPPKKKFKTG  EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVL 540

Query: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
           QELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600

Query: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
           KTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGR +EALMQMEKICKVANKPLVVTYT
Sbjct: 601 KTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRWEEALMQMEKICKVANKPLVVTYT 660

Query: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
           GLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF EA+ELFQN+SE  
Sbjct: 661 GLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFNEAKELFQNMSENG 720

Query: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
           RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+
Sbjct: 721 RNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIM 780

Query: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
           EAARGGKDELLETTWKHLAQADR  PPPL+KERFC+ LARGDYSEALS I  H+S D HH
Sbjct: 781 EAARGGKDELLETTWKHLAQADRILPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHH 840

Query: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
           FS+SAWLNLLKEKRFP+D+VI+LIHKV M+L RN+SPNPV +NLLLS KEFCR+RIS+AD
Sbjct: 841 FSKSAWLNLLKEKRFPKDSVIQLIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVAD 897

Query: 901 HRLEETV 906
            RLEE V
Sbjct: 901 PRLEEVV 897

The following BLAST results are available for this feature:

BLAST of Cucsat.G8177.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA76	2.6e-209	44.73	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop...	[more]
Q9FJW6	2.4e-106	37.91	Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop...	[more]
Q9FMD3	3.7e-22	24.52	Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidop...	[more]
Q0WPZ6	8.3e-22	26.64	Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX...	[more]
Q9SR00	1.8e-21	25.15	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of Cucsat.G8177.T3 vs. NCBI nr


Match Name	Identity	Description
XP_031741862.1	100.00	pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sa...	[more]
XP_008459122.1	93.84	PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic ...	[more]
KAA0047051.1	92.52	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387...	[more]
XP_038894404.1	87.32	pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 ...	[more]
KAG7019446.1	83.13	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of Cucsat.G8177.T3 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LVN7	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1	[more]
A0A1S3C8Z0	93.84	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ...	[more]
A0A5D3CBM0	92.52	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1EH18	82.80	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo...	[more]
A0A6J1KEH7	82.80	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbit...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 353..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..144
None	No IPR available	PANTHER	PTHR46935:SF1	OS01G0674700 PROTEIN	coord: 4..896
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 525..720
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 505..650 e-value: 6.6E-22 score: 80.3 coord: 651..796 e-value: 5.6E-21 score: 77.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 358..504 e-value: 2.8E-14 score: 54.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 654..699 e-value: 9.4E-10 score: 38.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 656..683 e-value: 0.0022 score: 16.1 coord: 690..718 e-value: 1.2E-6 score: 26.4 coord: 517..550 e-value: 2.3E-4 score: 19.1 coord: 432..465 e-value: 2.6E-4 score: 19.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 514..558 e-value: 2.4E-9 score: 37.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 432..458 e-value: 0.018 score: 15.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 584..618 score: 8.681407
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 688..722 score: 10.785976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 515..549 score: 10.972319
IPR044645	Pentatricopeptide repeat-containing protein DG1/EMB2279-like	PANTHER	PTHR46935	OS01G0674700 PROTEIN	coord: 4..896

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G8177	Cucsat.G8177	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T3.E1	Cucsat.G8177.T3.E1	exon
Cucsat.G8177.T3.E2	Cucsat.G8177.T3.E2	exon
Cucsat.G8177.T3.E3	Cucsat.G8177.T3.E3	exon
Cucsat.G8177.T3.E4	Cucsat.G8177.T3.E4	exon
Cucsat.G8177.T3.E5	Cucsat.G8177.T3.E5	exon
Cucsat.G8177.T3.E6	Cucsat.G8177.T3.E6	exon
Cucsat.G8177.T3.E7	Cucsat.G8177.T3.E7	exon
Cucsat.G8177.T3.E8	Cucsat.G8177.T3.E8	exon
Cucsat.G8177.T3.E9	Cucsat.G8177.T3.E9	exon
Cucsat.G8177.T3.E10	Cucsat.G8177.T3.E10	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T3.C1	Cucsat.G8177.T3.C1	CDS
Cucsat.G8177.T3.C2	Cucsat.G8177.T3.C2	CDS
Cucsat.G8177.T3.C3	Cucsat.G8177.T3.C3	CDS
Cucsat.G8177.T3.C4	Cucsat.G8177.T3.C4	CDS
Cucsat.G8177.T3.C5	Cucsat.G8177.T3.C5	CDS
Cucsat.G8177.T3.C6	Cucsat.G8177.T3.C6	CDS
Cucsat.G8177.T3.C7	Cucsat.G8177.T3.C7	CDS
Cucsat.G8177.T3.C8	Cucsat.G8177.T3.C8	CDS
Cucsat.G8177.T3.C9	Cucsat.G8177.T3.C9	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T3	Cucsat.G8177.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding