Cucsat.G8177.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G8177.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg1557: 2226756 .. 2234549 (+)
RNA-Seq Expression	Cucsat.G8177.T5
Synteny	Cucsat.G8177.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTCTCTCCATATTAATTTATTTGAAGGACTTCCTTGTCAACAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGGTTTTTCCCTGTTTCTCACCTTTACTACTTGATTAATGTAGTGATAGTTCTAATAAAGTCCTTGGTTATGATGCCTTAAAAGAGTAAGAGTGGCCAGTGATGCCTTTCCTCGGTCTTGAAGTGCAATTTAGATTTTCTTTTTTATATTTGTAGTGTCTCAACCAACTTACATGCATTTCGGCTAATTTCACGAGACAATCCACCCGATCCTACAATATTTTGGTGTCAAGAAAACTCATAGAACATTAATTCTTTGGTAGGTGACCACTATATAATAAATCCACGACCTATTAGTTAGTTATTGAGACAATGTCTCCTTTTTACCACTAGGCCAACCTACGAGGGAGGATCAATGTTTTGAACGGCGCACTTGGGCACACGCCTAAGTGCAAGGCTCAACGGTGGTGCCTCGCCTCAGAAAGTTGAGGTGCATGAAATAAGGCACACGCCTTTCGGTGAATCACTTAAAATGTAAACTATTTTGCATTTTAGGGTTTCTGTTTGCCCATTTATTGTAAATATGTTTATACATATATAATTTTTAAACCTAATTTGGCATCATTTCTTAAAAAAATAGAACGTCTTTTCCTCTCCTTTCTCTCACCTTCTTCATTCTTCACTGTATCACCGTCTTCCTCTTCGTCTCCAATCTTCACTGAATCATCATTTACGGTGGATATCAAAGATTTAAAAGACCATCAAAATTATCTGGCACTTGATTCTTCTCCAAAATACAAAGGAATGCCAACATTCTTCCTGACCTCTTGGTCCTCCTCTCTTCAATTCTTCTAACTAAATCTTTTTTTTTTTTGTATAATCTTCTTTAAGTCCCATTTCTATCCATCTAAGTTTTGGTTGTGTAAATAAACATGTAAGTTTATAATGCCTAGGCTCCAGAGCCATTGGGCCTTGGGCATTTTAAGACACTGGGGAGGATAAAAAGGAAAGATAAAAGAGGAGAGAGAGAGGGGATATGGCCATCAGATTTTAAATTTAATCTCTTTTAAGAATATAAAGAAAGTGCTAAAGTATTGAATAATAAATTAAATTTAACTCATCACCCCCCCCCCCCCCCCCCCCACCCCCCACCCCCACACACCACACGATTAGGTACATTGCTGATTTAACATGGTATTAGAGCAAGAGGTCCCACTGTTCAAACTCCTAAAATATCATTTTTTCTTCAATTAATACTAATTTCTAATTTTCAAGCCCACAAGTGAAGGTGAGTATTAAAGTATTAATATAACTAAATTTATTTAAACCCATCAACTTAAGCTTTTTGAGTTTGTTGGGAATTTGTTAGATACCTAGATTAGTATACATGGTTTATCTTGTATAAGGGTAATTAGATTAGTGGGTGTAAGGGTAATTAGATACTTAGGAAGTTACTAGTCGTTATTGTGTAAGTGTGTTTACTAGTAGTTATTATTTAAGTGTGATTACTGGGGTTGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGAGGTTACTGTGGAGTGATTTGGGGTTTGGGTGAGAGTACTCAAGAGGGAGGTTCTAGGTGCCTTATACATGGGTTTATCTTGTATCTTCTTATAGTTCATTATAATAAATTAAGATCTTGTTAACAAGTATTCTTACAGAATTTAACAAAAAATCTTCATCCTAAGTTCCCAACATTTTCTAAAGAATCTTGCACCCACTAAAAAAAATTAATTAGAGAGAATTGAACCTTAATCTAATAATTTGTCCTCATCATTAATCAAATGAACTGGAAAGCTGCGATAATGCTGAAAAATAACTCAAATATGATAAAAACATCAGAAATCTTAAAATGGAAAAGATATTCACTTTCTTGCATTGCCCTGTCACCAAGTATGTTCTTTGACTAACAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGTAGGCAGTTAACTAACAACCTTCACTAGGATTTGCTGTCTTGGTCTGCGCACGTTTATGCAAGTGGATGCTGAAATTGACAGAATTTTTACTAACTCTGGTTGTGCCATCTCGGTTTCCCTTCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTGAGTCATAATTGGTAGATTATTTTATATTTTACAGGCAATATTTGGTTAATGTAATATACTGAGCAATTTTGTGGAAAAAAATGTTAAAGAGCAAAATAATCTTGTTATGGATATTTTCTGCTGTTTTGCTCGTAATATATTTATTCTTAGATCTGAGAATTCAAATATGACAATCATCTAGATTTTAGTGAATGTTTTGTTATCATTGTTCCATGATTGACGAAAGATTTAGATTTTGTACACATGGTTGGATTTCATTATTTTTCTTTTCCTTTTCCTTTTGGATAAAAGGCACCACTTCTAATTTGACAAATGAAAGGAATATAAAAAGAGGCATAGGAAAAAACTAGGCTCTACAACAAAATTGGGCAACCAAAAACGAGAGAAACACACATTAAGAACACTAATTCATCAGAAAAAGGAGAAAAATCCCAAAACAAATTGCAAAAACAACCTAATAGGGTCGAGTGAAGCTGAGAGTTAGTGGCAAATTTTTTTTTTTAAATTTGATTAATTAATTAATTAATATTATTATTGGTTTCTTCTGGTAGGAAATGTTAACATTTTTTTAGATGATATGAAATTACAGAGTTGATTCTTCAAAGCATTGTTTATTTTCTTTACGTTTTCACTTTCCATCTAACATACTGTTGCTATTTTCCTTTCTATTTTTTTCATAAAATTTTAAATTACTCAGTCATTAAGGCAAGTCTCCAGCATTGCTTCCTCCATTTGTTGCAAGGATATGTTTTTCTTCAAAACTTTTCTCATGTTTATTCATTATTACTATGAGATGCCAATAGAAACAACGTTATTTCCGAATTCTTTATGGAAATATATCTTGCATGGGTTTCTTTCAAGTTGTTCACTTGCAGTAGCCATTTTATTTCTTTCTTTCAGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTAGCTGGTCCTTTAATTTCTTTCTATTGTTCATGTAATTTGCAAGTCTATTTTGAAATTCAGAATGATTTTTCTAATGCTCGTTGCTTGAGATGCTGTGAATGAGAAATGCTTGATTTTGTGCACCCAAGAAGGAATGAACACTCATTAAGTTGCGTTGAATTCACTCAGTAACGTGTTAAATATTATTCTTACCTTTTGATTAGTAGAAAGTAAATGGTTTTGGGTATTGCATGGACACAGAGTGGACATATTGGGTTCTGAGTCTTTGAAGAGAATTAGTCGAAAGGTAGATTCTCTACCAAGTCCATGTTCCTAAACTTCACTAAGGGAGTTGCAAAAAATAATTATAGTCAACCTTATGTGGTACTGGAAGCTTAAAATTTCCAAGAAAGTAAAGATTTTCCTTTGGTCACTTGCTTATAGAAGTCTAAATATTCACAAGAAGCTTCAGAGAACGTTCCCTAATTGGTCCCTCTCCTCCATTTGCTGTCTTTTTCTTAGGGAGATGGAAACTATAGGTCACTTGTTCTTGCATTCTGAGTTTACTTTTAGAGGTTGGCAAATTCTCTTTAGTACTTTTGTGGTGGCTAGTTGCCTTCCTAAAAAAATCGATGATTGAATGATGGAAGTTTCTGCAGAAAAGGGAAAATCCTTCGGAGAAGTGCTACTCAAGTGCTTTTGTGGTTTCTTTGGAAAAAAAAAGAGAATAATACATTGTTTGACGATAATTTTGTTTCTTTTGATTTTTTTGGGCTTTTGTTCAACGTGCAACCTCTCGGTGATGTTCAAGCTACACCAATTTTTTTTTTCCAAAGCATTTCTATAACTATTCGCTATGAAACATTAATCTTAGTTGGATCCCCTTCCTTTAGTGGGGCTCTTTTTTTGTTGCGCTTGTTATTTTTTTCTATTTCCTTGTATTCTTTCATTTTTTCTCAATTAAAGTTGTTTCTATTAAAAAAAAAAAGAAGTTAGACCAAATTCTTTTTTAATTATAGCATTCTCATGATTATGAGCAATGGAGGGCTTTTCTCTATAGTTTTGTGGAGAGGTTTTCTCTACCCCTGCCTCTAGGCTGTTCTGGTAGCTCTTTTGATGAATATATATCTGTTTCTTATAAACAAAAAAGTCCTAACAGTGAATGGTAAGCCTAGAAAGAAAGAAGAAGATCTAGACCATCTTTTCAAGACATTGTTCAATAGGTATGAAAAACACCAATCTTTCGTGTTGTTTGCCTTATCCTTTCTCAATCAATCGCATATGAGTAAGTGCGTGCTTGGACTTGGTCAAGGATACATTTTATGGTTAGATTATGTAATCACTTATCACAAGCAGCTTTTGAACGATTACTTGCGTCTATCCTTCATAAAATATAAGTCACTTGATTGACGGTTATTCATGTGCACTGAAAATTATTGTTCACAAGTTCATGATTTTTTAAAAGAAACTTTAGTTCATGCACTGTTGAGAATGAATTAAGGTAACCCAATTTCTAAAACCTGTTATTTAATTATTTTCCCAAGTTCCTCTTTTCCCTGTGAAGCAAAAAAAGTTCGTTCTTTAAGTCGACTCTTAAACTGCCCCTAGATTTTCAATTTAGGTGAAGAAAAATAATTTGATCGGATGTTCTTCTACTATTAAAATTTGAAAGTCATGCTTCCATGACTTAATTTATTTGATTGTGCTGAAGTTACATTTTCATATGCAAGTAAGCCTATTGAAATTTTCTATTTACTGAATGAAACAGTTGAAATATTCTATTTACTGAACGAAACATTTTTCAATGAATGATAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGGTAGACTCGGTAGTCACAGTGTGTTTATTTGTTTCTTGTTATATATTTGCTTAATGGCTTGTCAAATTTCCAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGGTATTTCATAGTAAATTTTTGTTTTTTCTTTCAGCCTTTTATTTGTTTTTCCCTTTCTCATCCAACTTATATTTTATTTTTTCTCTTATGTGGATATATTATATATTACTATTGGTTATTTCCATGAGTTGGTTCAAAATGTTATCCCCTGAGTTTGAGCTCTATTTCCTAAGATGGGAGAAGTAGAAGTTGTTTATTATTTAAGAAGAAATTAGTCGACCTGACTCAATATGATAAGTCAAACAACATAGGATTTGGTTTCTCTTTATCACTCGCTCTTTTTGTTTAAAAAATACTGAATTTGAGGTTAACTAATCACCATATCTTAAAAATTCTCAAAACCTTTGAGTCTTTCTTAATCATGCCTACAATTTCATGATGAGCTTTATTGCCCCATAGTAATGTTTCTGCCTCAGACATCTCTTTCTGAGTGAATTTCTGGCTCCTTAATATTCTTGGCCTCTCCTTTGGGAGGTCAAATTTACTTCATAGTTCAAACTGTCTGGTTGCACATCCTGATTGCAGTCTGTTTACACGAATGATAATTAATGAATAGACCTCACGACGACCTTGTTATTGTTTACAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGTGGACCTTTTAAATTCAACGTCTTTTTCTTTCCTTGGTTCTCCTCCTTCCTTTCTACGTTTCTATATCTTTTTATATTGCACCACTAGCCTATTTTAAACGTGTATAGTTTAAGTTGGCTCTAGGAATGTTGCTTAATGCTTATAATTGACGATAGTTTTAAATATGCACATGCTAAAGAGATGTAATGATAATAATAGATAATATCATGAAACTATTGGAGGCTGAATTCGACCATTTTCCTATGACGTTTGACTTCTTAGGTGTATGACATTGATCATTTGTTGAAGTATTGAGAAAACAAAACGCTAAATCAATTTATTTTTTAATTGATCATGAAATTCAAGATTAAATTGTTCCTTGGCTATTAAGGGGTTCATAACTTCACATTCATGCTTAGAATTCGAGTTCTGCTTATACTAAGAAAAGAAACTATATTCCTTTATGATCTGTGGATGACTTGGTCTTAATTTCCTGCTCTACAAAAGGAATAAACTAAGATAAGTTGATCGCTTAGACTCATTATGGTTTTGCTTTCCTTTAACCATCGACTTCTGTTGTACAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAAAATGAAATCTAACCTGCTGCTATCACATATATATCTATCTATCTATATATATTTAGCATAATTTGAGAGGAAATAATTTTGTTTTATTCATTCTTTTGTCCTCAGTTTATGTATTACATAAAGGAACTAGAAAAGGAAAATCAATAATATTTGTACGAAGTTATTGTTGATTTGAAAAATAGAGTT

Coding sequence (CDS)

AGTCTCTCCATATTAATTTATTTGAAGGACTTCCTTGTCAACAGATTGAATGGTGCAGACATTGATATGCCTGAGTGGATGTTCTCTCAAATGATGAGGAGTGCAAAGATTAGATATTCAGATCATTCAATATTAAGGGTTATTCAAGTGTTGGGTAAGCTAGGAAATTGGAGGCGAGTGCTACAAATCATCGAATGGCTTCAAATGCGTGAACGGTTCAAGTCACATAAGCTGAGATTTATATACACCACTGCCCTTGATGTACTTGGAAAAGCGAGGAGACCTGTGGAGGCACTCAATGTATTCCATGCAATGCAGGAACACTTTTCCTCATATCCTGACTTGGTAGCATATCATAGTATTGCTGTCACTCTTGGACAAGCAGGATATATGAGGGAACTCTTTGATGTGATTGATAGCATGCGATCTCCTCCAAAGAAGAAGTTTAAAACAGGGGTTCTTGAGAAGTGGGACCCACGGCTGCAACCTGATATAGTTATCTATAATGCGGTTTTAAATGCTTGTGTCAAACGAAAAAATTTGGAAGGGGCATTTTGGGTCTTGCAGGAATTGAAGAAACAAAGTCTACAGCCTTCAACCTCAACATATGGATTGGTCATGGAGGTGATGCTTGAATGTGGCAAGTACAACTTAGTTCATGAATTCTTCAGAAAAGTGCAGAAATCTTCCATTCCTAATGCTTTAACATATAAAGTTCTTGTTAATACACTTTGGAAAGAAGGAAAAACAGATGAGGCTGTGCTGGCCATTGAGAACATGGAAATACGAGGGATAGTAGGGTCTGCAGCTCTTTATTATGACTTTGCTCGTTGTCTTTGCAGTGCTGGTAGGTGCAAAGAGGCCCTGATGCAGATGGAGAAGATATGTAAAGTTGCTAACAAGCCTCTTGTAGTAACTTACACCGGTTTGATTCAAGCTTGTTTGGACTCAAAAGACTTGCAAAGTGCAGTCTATATTTTCAACCACATGAAGGCCTTTTGCTCACCGAATCTTGTTACTTATAATATATTGTTGAAAGGTTACTTGGAACATGGAATGTTTGAAGAGGCTAGAGAGCTGTTTCAGAATTTGTCAGAGCAAAGACGAAATATCAGCACTGTATCTGACTACAGGGATCGAGTATTACCAGATATCTACATGTTCAATACCATGCTAGATGCATCTTTTGCAGAAAAAAGATGGGATGATTTTAGCTATTTCTATAACCAGATGTTTCTTTATGGTTATCATTTCAATCCAAAACGTCATTTGAGGATGATATTGGAGGCTGCTAGGGGTGGAAAGGATGAGCTACTGGAAACAACATGGAAGCACCTTGCTCAGGCTGACCGTACTCCACCACCACCGCTTCTCAAAGAAAGGTTTTGCATGAAGCTGGCTAGAGGTGATTACTCTGAAGCGCTCTCTTCCATTTGGAGTCACAATAGTGGTGATGCACATCATTTCTCTGAGTCGGCTTGGCTAAATTTACTGAAAGAGAAAAGGTTTCCCAGAGATACTGTTATTGAGCTAATTCATAAGGTTGGCATGGTTCTTACTAGAAATGAATCACCAAATCCAGTGTTTAAGAATCTGCTATTGAGTTGTAAAGAATTTTGCAGAACTAGAATTAGTTTAGCTGACCATAGACTTGAAGAAACTGTTTATTAA

Protein sequence

SLSILIYLKDFLVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETVY

Homology

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BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot
Match: Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 4.2e-202
Identity = 349/565 (61.77%), Postives = 432/565 (76.46%), Query Frame = 0


Query: 12   LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
            L   LNGADI+MPEW FS+ +RSAKIRY+D++++R+I  LGKLGNWRRVLQ+IEWLQ ++
Sbjct: 440  LAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQD 499

Query: 72   RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
            R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM    SSYPD+VAY SIAVTLGQAG++
Sbjct: 500  RYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHI 559

Query: 132  RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
            +ELF VID+MRSPPKKKFK   LEKWDPRL+PD+V+YNAVLNACV+RK  EGAFWVLQ+L
Sbjct: 560  KELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQL 619

Query: 192  KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
            K++  +PS  TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+D
Sbjct: 620  KQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSD 679

Query: 252  EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEAL---------------------- 311
            EAV  +E+ME RGIVGSAALYYD ARCLCSAGRC E L                      
Sbjct: 680  EAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKAD 739

Query: 312  ------MQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNI 371
                   Q++KIC+VANKPLVVTYTGLIQAC+DS ++++A YIF+ MK  CSPNLVT NI
Sbjct: 740  LVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNI 799

Query: 372  LLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDD 431
            +LK YL+ G+FEEARELFQ +SE   +I   SD+  RVLPD Y FNTMLD    +++WDD
Sbjct: 800  MLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDD 859

Query: 432  FSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFC 491
            F Y Y +M  +GYHFN KRHLRM+LEA+R GK+E++E TW+H+ +++R PP PL+KERF 
Sbjct: 860  FGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFF 919

Query: 492  MKLARGDYSEALSSIWSHN----SGDAHHFSESAWLNLLKEKRFPRDTVIELIHKVGMVL 544
             KL +GD+  A+SS+   N      +   FS SAW  +L   RF +D+V+ L+  V   L
Sbjct: 920  RKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRL 979

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BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot
Match: Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)

HSP 1 Score: 389.0 bits (998), Expect = 8.8e-107
Identity = 207/541 (38.26%), Postives = 324/541 (59.89%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           LV+RL+G +I+   W F +MM  + +++++  +L+++  LG+  +W++   ++ W+   +
Sbjct: 188 LVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDK 247

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           + K  + RF+YT  L VLG ARRP EAL +F+ M      YPD+ AYH IAVTLGQAG +
Sbjct: 248 KRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLL 307

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           +EL  VI+ MR  P K  K    + WDP L+PD+V+YNA+LNACV     +   WV  EL
Sbjct: 308 KELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVEL 367

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLWKEGKT 251
           +K  L+P+ +TYGL MEVMLE GK++ VH+FFRK++ S   P A+TYKVLV  LW+EGK 
Sbjct: 368 RKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKI 427

Query: 252 DEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVAN-KPLVVTYTG 311
           +EAV A+ +ME +G++G+ ++YY+ A CLC+ GR  +A++++ ++ ++ N +PL +T+TG
Sbjct: 428 EEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTG 487

Query: 312 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 371
           LI A L+   +   + IF +MK  C PN+ T N++LK Y  + MF EA+ELF+ +     
Sbjct: 488 LIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI----- 547

Query: 372 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 431
               VS     ++P+ Y ++ ML+AS    +W+ F + Y  M L GY  +  +H  M++E
Sbjct: 548 ----VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 607

Query: 432 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 491
           A+R GK  LLE  +  + +    P P    E  C   A+GD+  A++ I +  +  +   
Sbjct: 608 ASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLI-NTVALASFQI 667

Query: 492 SESAWLNLLKEKR--FPRDTVIELIHKVG-MVLTRNESPNPVFKNLLLSCKEFCRTRISL 548
           SE  W +L +E +    +D     +HK+   ++  +    P   NL  S K  C +  S 
Sbjct: 668 SEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRCGSSSSS 714

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot
Match: Q9FMD3 (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-22
Identity = 77/314 (24.52%), Postives = 145/314 (46.18%), Query Frame = 0


Query: 81  IYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 140
           IY T +D L K+++   AL++ + M++     PD+V Y+S+   L  +G   +   ++  
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSC 247

Query: 141 MRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPST 200
           M                   + PD+  +NA+++ACVK   +  A    +E+ ++SL P  
Sbjct: 248 MTK---------------REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 307

Query: 201 STYGLVMEVMLECGKYNLVHEFFR-KVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIEN 260
            TY L++  +    + +   E F   V K   P+ +TY +L+N   K  K +  +     
Sbjct: 308 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 367

Query: 261 MEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKD 320
           M  RG+V +   Y    +  C AG+   A     ++      P ++TY  L+    D+  
Sbjct: 368 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 427

Query: 321 LQSAVYIFNHM-KAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYR 380
           ++ A+ I   M K     ++VTYNI+++G  + G   +A +++ +L+ Q           
Sbjct: 428 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ----------- 473

Query: 381 DRVLPDIYMFNTML 393
             ++PDI+ + TM+
Sbjct: 488 -GLMPDIWTYTTMM 473

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot
Match: Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.1e-22
Identity = 57/214 (26.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 159 PRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNL 218
           P  +P + +YN +L +C+K + +E   W+ +++    + P T T+ L++  + +    + 
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165

Query: 219 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFAR 278
             E F ++ +K   PN  T+ +LV    K G TD+ +  +  ME  G++ +  +Y     
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225

Query: 279 CLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK-----A 338
             C  GR  ++   +EK+ +    P +VT+   I A      +  A  IF+ M+      
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 339 FCSPNLVTYNILLKGYLEHGMFEEARELFQNLSE 367
              PN +TYN++LKG+ + G+ E+A+ LF+++ E
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-21
Identity = 86/342 (25.15%), Postives = 146/342 (42.69%), Query Frame = 0


Query: 140 SMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPS 199
           ++R+ PK      +LEK+    QPD+  YNA++N   K   ++ A  VL  ++ +   P 
Sbjct: 136 TLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD 195

Query: 200 TSTYGLVMEVMLECGKYNLVHEFFRKVQKSSI-PNALTYKVLVNTLWKEGKTDEAVLAIE 259
           T TY +++  +   GK +L  +   ++   +  P  +TY +L+     EG  DEA+  ++
Sbjct: 196 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 255

Query: 260 NMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 319
            M  RG+      Y    R +C  G    A   +  +     +P V++Y  L++A L+  
Sbjct: 256 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 315

Query: 320 DLQSAVYIFNHM-KAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDY 379
             +    +   M    C PN+VTY+IL+      G  EEA  L + + E+          
Sbjct: 316 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK---------- 375

Query: 380 RDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGK-D 439
              + PD Y ++ ++ A   E R D    F   M   G   +   +  ++    + GK D
Sbjct: 376 --GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 435

Query: 440 ELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSI 479
           + LE   K L +   +P        F    + GD   AL  I
Sbjct: 436 QALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461

[Close]

BLAST of Cucsat.G8177.T5 vs. NCBI nr
Match: XP_031741862.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >XP_031741863.1 pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >KGN65965.1 hypothetical protein Csa_023210 [Cucumis sativus])

HSP 1 Score: 1107 bits (2862), Expect = 0.0
Identity = 543/545 (99.63%), Postives = 543/545 (99.63%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE
Sbjct: 363 LSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 422

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 423 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 482

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL
Sbjct: 483 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 542

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 543 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 602

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI
Sbjct: 603 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 662

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI
Sbjct: 663 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 722

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA
Sbjct: 723 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 782

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE
Sbjct: 783 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 842

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL
Sbjct: 843 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 902

Query: 552 EETVY 556
           EETVY
Sbjct: 903 EETVY 907

[Close]

BLAST of Cucsat.G8177.T5 vs. NCBI nr
Match: KAA0047051.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1073 bits (2775), Expect = 0.0
Identity = 523/547 (95.61%), Postives = 534/547 (97.62%), Query Frame = 0


Query: 10  DFLVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 69
           DFLVNRLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQM
Sbjct: 348 DFLVNRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQM 407

Query: 70  RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 129
           RERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG
Sbjct: 408 RERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 467

Query: 130 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 189
           YMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ
Sbjct: 468 YMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 527

Query: 190 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 249
           ELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK
Sbjct: 528 ELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 587

Query: 250 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 309
           TDEAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG
Sbjct: 588 TDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 647

Query: 310 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 369
           LIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+
Sbjct: 648 LIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQ 707

Query: 370 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 429
           NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE
Sbjct: 708 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 767

Query: 430 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 489
           AAR GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHF
Sbjct: 768 AARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHF 827

Query: 490 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 549
           SESAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADH
Sbjct: 828 SESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADH 887

Query: 550 RLEETVY 556
           RLEETV+
Sbjct: 888 RLEETVH 894

[Close]

BLAST of Cucsat.G8177.T5 vs. NCBI nr
Match: XP_008459122.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis melo])

HSP 1 Score: 1064 bits (2751), Expect = 0.0
Identity = 519/545 (95.23%), Postives = 530/545 (97.25%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQMRE
Sbjct: 365 LSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMRE 424

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 425 RFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 484

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL
Sbjct: 485 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 544

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 545 KKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 604

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI
Sbjct: 605 EAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 664

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+NI
Sbjct: 665 QACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNI 724

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA
Sbjct: 725 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 784

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           R GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHFSE
Sbjct: 785 RVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSE 844

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADHRL
Sbjct: 845 SAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRL 904

Query: 552 EETVY 556
           EETV+
Sbjct: 905 EETVH 909

[Close]

BLAST of Cucsat.G8177.T5 vs. NCBI nr
Match: XP_038894404.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1045 bits (2702), Expect = 0.0
Identity = 508/544 (93.38%), Postives = 526/544 (96.69%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQMRE
Sbjct: 362 LCKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMRE 421

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALN+FHAMQ+HF+SYPDLVAYHSIAVTLGQAGYM
Sbjct: 422 RFKSHKLRFIYTTALDVLGKARRPVEALNLFHAMQQHFTSYPDLVAYHSIAVTLGQAGYM 481

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           +ELFDVIDSMRSPPKKKFKTGVLEKWDPRL+PDIVIYNAVLNACVKRKNLEGAFWVLQEL
Sbjct: 482 KELFDVIDSMRSPPKKKFKTGVLEKWDPRLEPDIVIYNAVLNACVKRKNLEGAFWVLQEL 541

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 542 KKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 601

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAIENME RGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA KPLVVTYTGLI
Sbjct: 602 EAVLAIENMERRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVATKPLVVTYTGLI 661

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSKD++SAVYIFNHMK FCSPNLVTYN+LLKGYLEHGMFEEARELFQNLSE  RNI
Sbjct: 662 QACLDSKDIRSAVYIFNHMKTFCSPNLVTYNMLLKGYLEHGMFEEARELFQNLSEHGRNI 721

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDF YFY+QM LYGYHFNPKRHLRMILEAA
Sbjct: 722 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFGYFYDQMLLYGYHFNPKRHLRMILEAA 781

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           R GKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALS I +H+S D HHFSE
Sbjct: 782 RAGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSCISNHDSSDVHHFSE 841

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           S WLNLLKEKRFP+DTVI+LI+KV M+LTRN+ PNPVFKNLLLSCKEFCRTRIS+ADHRL
Sbjct: 842 SGWLNLLKEKRFPKDTVIQLINKVSMLLTRNDLPNPVFKNLLLSCKEFCRTRISVADHRL 901

Query: 552 EETV 555
           EETV
Sbjct: 902 EETV 905

[Close]

BLAST of Cucsat.G8177.T5 vs. NCBI nr
Match: XP_023519692.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1011 bits (2614), Expect = 0.0
Identity = 493/544 (90.62%), Postives = 518/544 (95.22%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQMRE
Sbjct: 354 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 473

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQEL
Sbjct: 474 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           K+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 593

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAI+ ME RGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI
Sbjct: 594 EAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 653

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE  RNI
Sbjct: 654 QACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNI 713

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           S VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+EAA
Sbjct: 714 SAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAA 773

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           RGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I  H+S D HHFS+
Sbjct: 774 RGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSK 833

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RIS+AD RL
Sbjct: 834 SAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRL 893

Query: 552 EETV 555
           EE V
Sbjct: 894 EEVV 897

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL
Match: A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)

HSP 1 Score: 1107 bits (2862), Expect = 0.0
Identity = 543/545 (99.63%), Postives = 543/545 (99.63%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE
Sbjct: 363 LSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 422

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 423 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 482

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL
Sbjct: 483 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 542

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 543 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 602

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI
Sbjct: 603 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 662

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI
Sbjct: 663 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 722

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA
Sbjct: 723 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 782

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE
Sbjct: 783 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 842

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL
Sbjct: 843 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 902

Query: 552 EETVY 556
           EETVY
Sbjct: 903 EETVY 907

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL
Match: A0A5D3CBM0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10007G00030 PE=4 SV=1)

HSP 1 Score: 1073 bits (2775), Expect = 0.0
Identity = 523/547 (95.61%), Postives = 534/547 (97.62%), Query Frame = 0


Query: 10  DFLVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQM 69
           DFLVNRLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQM
Sbjct: 348 DFLVNRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQM 407

Query: 70  RERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 129
           RERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG
Sbjct: 408 RERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAG 467

Query: 130 YMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 189
           YMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ
Sbjct: 468 YMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQ 527

Query: 190 ELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 249
           ELKKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK
Sbjct: 528 ELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGK 587

Query: 250 TDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 309
           TDEAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG
Sbjct: 588 TDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTG 647

Query: 310 LIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRR 369
           LIQACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+
Sbjct: 648 LIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQ 707

Query: 370 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 429
           NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE
Sbjct: 708 NISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILE 767

Query: 430 AARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHF 489
           AAR GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHF
Sbjct: 768 AARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHF 827

Query: 490 SESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADH 549
           SESAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADH
Sbjct: 828 SESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADH 887

Query: 550 RLEETVY 556
           RLEETV+
Sbjct: 888 RLEETVH 894

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL
Match: A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)

HSP 1 Score: 1064 bits (2751), Expect = 0.0
Identity = 519/545 (95.23%), Postives = 530/545 (97.25%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQMRE
Sbjct: 365 LSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMRE 424

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 425 RFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 484

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL
Sbjct: 485 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 544

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 545 KKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 604

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAIENME+RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI
Sbjct: 605 EAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 664

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSKDLQSAVY+FN MKAFCSPNLVTYNILLKGYLEHGMFEEAREL QNLSEQR+NI
Sbjct: 665 QACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNI 724

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA
Sbjct: 725 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 784

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           R GKDELLETTWKHLAQADRTPPPPLLKERFCMK+ARGDY+EAL  I +HNSGDAHHFSE
Sbjct: 785 RVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSE 844

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFP+DTVIELIHKVGMV   NESPNPVFKNLLLSCKEFCRTRIS+ADHRL
Sbjct: 845 SAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRL 904

Query: 552 EETVY 556
           EETV+
Sbjct: 905 EETVH 909

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL
Match: A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)

HSP 1 Score: 1009 bits (2609), Expect = 0.0
Identity = 491/544 (90.26%), Postives = 518/544 (95.22%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L NRLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQMRE
Sbjct: 354 LSNRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYM 473

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTG  EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQEL
Sbjct: 474 RELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           K+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD
Sbjct: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 593

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAI+ ME RGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLI
Sbjct: 594 EAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLI 653

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE  RNI
Sbjct: 654 QACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNI 713

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           S VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+EAA
Sbjct: 714 SAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAA 773

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           RGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I  H+S D HHFS+
Sbjct: 774 RGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSK 833

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RIS+AD RL
Sbjct: 834 SAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRL 893

Query: 552 EETV 555
           EE V
Sbjct: 894 EEVV 897

[Close]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL
Match: A0A6J1CLQ9 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012614 PE=4 SV=1)

HSP 1 Score: 1002 bits (2590), Expect = 0.0
Identity = 489/544 (89.89%), Postives = 513/544 (94.30%), Query Frame = 0


Query: 12  LVNRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRE 71
           L  RLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQMRE
Sbjct: 362 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 421

Query: 72  RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 131
           RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYM
Sbjct: 422 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYM 481

Query: 132 RELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQEL 191
           RELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQEL
Sbjct: 482 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 541

Query: 192 KKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTD 251
           KKQ LQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQ+SSIPNALTYKVLVNTL KEGKTD
Sbjct: 542 KKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQRSSIPNALTYKVLVNTLSKEGKTD 601

Query: 252 EAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLI 311
           EAVLAI+NME RGIVGSAALYYDFARCLCSAGRCKEALMQ+EKICKVANKPLVVTYTGLI
Sbjct: 602 EAVLAIQNMERRGIVGSAALYYDFARCLCSAGRCKEALMQIEKICKVANKPLVVTYTGLI 661

Query: 312 QACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNI 371
           QACLDSK+L SAVYIFNHMKAFCSPNLVTYNILLKGYL+HGMFEEARELFQNLSE  ++I
Sbjct: 662 QACLDSKNLDSAVYIFNHMKAFCSPNLVTYNILLKGYLDHGMFEEARELFQNLSESGQSI 721

Query: 372 STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAA 431
           ST+SDY+DRVLPDIY FN MLDA FA KRWDDF YFYNQMFLYGYHFNPKRHLRMILEA 
Sbjct: 722 STISDYKDRVLPDIYTFNIMLDAFFAVKRWDDFGYFYNQMFLYGYHFNPKRHLRMILEAG 781

Query: 432 RGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSE 491
           R GKDE+LETTWKHLAQ DRT PPPL+KERFCMKLARGDYSEALS I +H+S DAHHFSE
Sbjct: 782 RAGKDEILETTWKHLAQTDRTLPPPLVKERFCMKLARGDYSEALSCISNHHSSDAHHFSE 841

Query: 492 SAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRL 551
           SAWLNLLKEK FP+DTVI LIHKV M+LT N  PNPVF+NLL SCKEFCRTRI++AD +L
Sbjct: 842 SAWLNLLKEKGFPKDTVILLIHKVSMLLTGNHPPNPVFQNLLSSCKEFCRTRITVADSKL 901

Query: 552 EETV 555
           E+ V
Sbjct: 902 EQIV 905

The following BLAST results are available for this feature:

BLAST of Cucsat.G8177.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA76	4.2e-202	61.77	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop...	[more]
Q9FJW6	8.8e-107	38.26	Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop...	[more]
Q9FMD3	2.3e-22	24.52	Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidop...	[more]
Q0WPZ6	5.1e-22	26.64	Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX...	[more]
Q9SR00	1.1e-21	25.15	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of Cucsat.G8177.T5 vs. NCBI nr


Match Name	Identity	Description
XP_031741862.1	99.63	pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sa...	[more]
KAA0047051.1	95.61	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09387...	[more]
XP_008459122.1	95.23	PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic ...	[more]
XP_038894404.1	93.38	pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 ...	[more]
XP_023519692.1	90.63	pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ...	[more]

BLAST of Cucsat.G8177.T5 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LVN7	99.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1	[more]
A0A5D3CBM0	95.61	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C8Z0	95.23	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ...	[more]
A0A6J1EH18	90.26	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo...	[more]
A0A6J1CLQ9	89.89	pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 303..348 e-value: 5.1E-10 score: 39.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 81..107 e-value: 0.0099 score: 16.1 coord: 236..265 e-value: 0.92 score: 9.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 163..207 e-value: 1.4E-9 score: 38.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 339..367 e-value: 6.4E-7 score: 27.2 coord: 81..114 e-value: 1.4E-4 score: 19.8 coord: 305..332 e-value: 0.0012 score: 16.9 coord: 166..199 e-value: 1.3E-4 score: 19.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 233..267 score: 8.681407
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 10.972319
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 10.785976
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 13..151 e-value: 1.6E-14 score: 55.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 160..296 e-value: 2.9E-20 score: 74.9 coord: 297..445 e-value: 1.0E-23 score: 86.3
None	No IPR available	PANTHER	PTHR46935:SF1	OS01G0674700 PROTEIN	coord: 12..545
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 174..369
IPR044645	Pentatricopeptide repeat-containing protein DG1/EMB2279-like	PANTHER	PTHR46935	OS01G0674700 PROTEIN	coord: 12..545

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G8177	Cucsat.G8177	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T5.E1	Cucsat.G8177.T5.E1	exon
Cucsat.G8177.T5.E2	Cucsat.G8177.T5.E2	exon
Cucsat.G8177.T5.E3	Cucsat.G8177.T5.E3	exon
Cucsat.G8177.T5.E4	Cucsat.G8177.T5.E4	exon
Cucsat.G8177.T5.E5	Cucsat.G8177.T5.E5	exon
Cucsat.G8177.T5.E6	Cucsat.G8177.T5.E6	exon
Cucsat.G8177.T5.E7	Cucsat.G8177.T5.E7	exon
Cucsat.G8177.T5.E8	Cucsat.G8177.T5.E8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T5.C1	Cucsat.G8177.T5.C1	CDS
Cucsat.G8177.T5.C2	Cucsat.G8177.T5.C2	CDS
Cucsat.G8177.T5.C3	Cucsat.G8177.T5.C3	CDS
Cucsat.G8177.T5.C4	Cucsat.G8177.T5.C4	CDS
Cucsat.G8177.T5.C5	Cucsat.G8177.T5.C5	CDS
Cucsat.G8177.T5.C6	Cucsat.G8177.T5.C6	CDS
Cucsat.G8177.T5.C7	Cucsat.G8177.T5.C7	CDS
Cucsat.G8177.T5.C8	Cucsat.G8177.T5.C8	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8177.T5	Cucsat.G8177.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding