Cucsat.G7826 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7826
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransducin/WD40 repeat-like superfamily protein
Locationctg1556: 1870692 .. 1876452 (+)
RNA-Seq ExpressionCucsat.G7826
SyntenyCucsat.G7826
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTGCCTTCACTCTCCGCTTTCCCTCGCTCTTTTCATCCCAACTTCTCTACACCTTTCTCTCTAATCATCTTTCTTCTTCTTCTCTTTCTCCCATTCAATTCAATCCAATCCAATCCAATCCTTCTCAAATCATCAATTCTCTCTCAATCTTTTTGTTCCATCTCCTCTTTTTGCTTTTTACGACCGCTACGCATTCTCAGTTCATTTATTCACAACCGCTTCTGTCTTCTCCTTCTTCTTCCTTCACTGCCATTTTAATTCTCTACTCGCTTGTTAGGTATTATTCCTTTTCTCTTTTATGTATTCTATATTCAGTTCTTTTCTACTATGACCCCTGCTTCTGCGAGGTCGGTTTTGTGATTATTCATGGAACTTCAAACAATCGTCCAATCCTATTTTTCAGTTATAATGTGTATGATTTTTTAGATGACTTTTCGTGGAGCGTAGTCATGAATTTTTCCTGAGTTTGGATATGTTTTTCTTCTGTTCTTCTTTGGTTTCTCATTCCTAGCTGTTTGTTTTGCGGTCTTGGTTTATGTTTTCGTTTGCTGGATAAATTTTAGAAAGCACGTTTCTCATTTTGTAGATCCATGGAAAATTTTGGAAACGACTTCCTTGATTATCTTGTTGATGACGATTATTACGACGTGGCTAATTTCGATGACGACTCCTCTTTTGGTGATGACGAAACGCAGAGGAGTAGCGATGTAGATTCTCTGGACTCTGATTTCGAAGATGATTTTGAGATGGTATATTGTCTGTGTGGCTTTCTATTTCTTGTCCTCTTTACGTTAGTTTTGGTTAGGGGAAAAAACAATTACTGAAAATGACGTTTGGCTTCAACAGAGCAAGTCAAGAACTGATACGTCTGCATTGGAAGCTAGAAATGGGAAAGATATACAAGGTATACCTTGGGAGAGGCTTCATTTTACAAGGGAAAAGTGCCGTGAGACACGTTTGAAACAGTACAAAAACTATGAGAACCTCTCACGCCCTCGCCAAGACCTCGAAAAGGTCAGTGGCTCTGTCGTTATCTCACTTTTATTTTGGCCATTGCTTAATTCTTTCTCTTTTATAACCACGAGAGAATCGATCTTCTTACGTCCTTTTGGGAACCAAAAAATTTGAAAATGGGATATGTCGATTTTGTTTGGCAAGTTGCGTTTGATTCAAGTAATCTTACTCTCTCGTGTAATTCCTAATTTACTTTCCTGGTTTTTAAATAATATAAGATAAGGAGATATTATTCATTCACTTTTTCGGAAGCCCCTTGCGTACTTTCCTTTATCCCGTTTCAGAAATTGAGAACAAACACTTTCATGATTGAAGAATAAACTTTCAAACCATGTTACGTTTATTTATTTATTTTAAAAAATAAGTTGGTTTTCTTGCCCTTTCTTGTTAAACAGGAATGCTTGCAAGTAGAGATGGGACATGCTTTCTATGACTTTCAGTTCAATACCAGACTTGTCAAGTCAACAATTGTGCATTTCCAGGTTGAGATTCTTATTCATAGTGTTTGTTTTCCTTCTCTGTCGTAATGGATACTTATTTCCGTTTTAGATATTCTTATTTATGGCTCTTTAGTTTGGAATTGTTTTTATTTTTCCTTCGTGAGGTTGACTACACAGTCCCTGTATCGTCTTTGTATTTTTTTTTTTAATAATAAAAAACATATATTTTTTCTTTTCTGCCTATTTTCGTGTTCGGTTGTCCTTTTATCCACAGAGCATGCTCAGTTTGGGAAAAAGTAGTAGTCTGCCGTGGTTGATTTTGATTTGTTGGGCCTTTTACAAATTTGGCGTTAGAAGATATAATTAAATTTAGTGGAGCAGATGGGTTTCGTAGTGATTTCAAATAGATCTAATCTTAATACACGCCTGGTCAGGTAGATATTTCTTTTTGATTTATAAATATGTGTCCTATCAAGAAACAGTTTCCTGTTCAAGATGCAAACAGTTACCCCCACAGCCATTATTAGTCATATTTTACCTGAACATGTTCTCCTCTGTCATGGATTCAACCGCAATAGGATTAATCTTTTATCAGTTGTGGTCGTTCAGATCATTGAGTTAGAGATTTACTTTTATGCTTGTGGTATGTACTATTCCTTATAGTACTTAACACTGTTTTGCTATTGATTCTCCCAAGTGTCTGAACTAATTCTGTGGAGCAATTCTGATAAATAACTGTACAGTCAACCTCTATTTTTCTTCTTTTAGAATCATTTTGTTTTTCCCTGTAGATGTAATGTGTCTGTTGTTCGTGTATCCTTATATTTTGTTTCAAATTTTTTTATGACGAAGTTGTAGATGCGTTGCTTATTGGCTGTTAACCATGATATATGAAATTAACCTCTCTTTGCTATTTAGGACTGCTATTTCACTTTATTTCAGCATGTAAAGCAGGTGGGAGTTATAACTGAGCAGCTGGCGCAACCTTGAAATGGTATGACAGGAAACCGTCTGAGCATTTAAGCCATAAGAGGCCGTATGAAAATTGCTTTAGTTAAATGTTGTCTATTCCCTAATATTAGGAGTTTTTCATTGAAATAGTTAATTTCTCCTTTATGCACACGATGACACATTTAAATGCAATTTCTTTATGATGCTTCGACTTGAATAGTTTTTTGTGGTGGTTTTATTTGGATAGAGTTCCTTTTATTTGGCCTTTGCTATCTGATAACGTAAGGGTTCGAAGTGCCATGGTGAATGGTTGATTTAATTTCTTGGAGATTATTTTTGTTCTATGTTAGTTTTAGTTTTAGTTTTAGCTTTTAGTTTTAGTTTTAGTTTTTTGTTAAAAAAAAATATCCTATTTGCACACTTCAACTACAATTTTTGTTGAGTTATCCCATGCACGGCCACGGCCTTAATTTCTTTGATTCAATTTTGTGGTTTTTAACAGATACATGGTTATATTATTATACATTATTTCGGTTTCTCAGTTCTGGAGACTGATTTTTCACTTTTACCACATGCTAATCAAAGATTTATTTAGATCTTGTTATTTCTTTATTTCTCTTGGTGAGATTATAATATCGCTACTCTGAAGTGTTGCATCTTGCGAAGGTCATCTCATAACAGTAGAAAATTGAGTGTGTCATGCTCTGAAACAAGGGCTCAGAGTCCTTGGGTGGGGTGGAAGGGAGGCAGTATCTGCCAAATGGGTCCTCATCTTTCTTATCATATTTAACACATGCCTTTTGGCTCTCTGTTTCTGTTTCAAGATTGTCTGGTGGCTGTTGAGTCCGTAGTTTCTTTGCAAGGCCTAGAAACATATCTGTGCTCTCTAATTTACCTTATTTTGCATGCTTTTTCTTTCCAATGTTAAGTCGTACATTCTTTCATTCAGCTTTTCTGTGTCCATGATAGTTATAATATTTTGTTGGTTTTTGTACCAGTACTTGGTTTCACCACCTTCGTCTATTTCACATGCTGTGTGGCATTTTGTGAATTATTTATTGAAATATTCAAGGTTGTGTTGTCCTTGTCCATGTGTAAGTTTCACTGGTTCAGTGAAGTCAATTATTCACACAGTTTCTGACATGTTGGATTCTAAAGTTGAGTGAAGTAAATTAGTCACGGAGGCTGGCATTTTAGGCTTCTATAGAGTCCCAGCTGACAAGCTAGTCAAGTATTTTGCTTTCTGGAGTTTGTTGAAACAAACAAACCGGAGTATCTTTTTGATTGATTATTTCTTACTTGTTTTGTTTCCATCATTTTGGTGATTTAATAACTCCTAAACATTCTTAATATATTCATTGACGTATCCACCAACTTCTGTTTTTCAATCTTTGCAGCTGAGAAATCTGTTATGGGCAACTTCCAAGCATGATGTATATCTAATGCAGAACTATTCAGTATTGCACTGGTCTTCATTGCTTCGAAGGAGCAAAGAAGTACTAAATGTAGCTAAACCAGTTGTTCCCACTCTGGTATGCAGTGCTTTGTTGGAAAATGTTTTTCCACACTAATGCCTGGCTCTTAAAGTTATCCTTTCCAGATCATTGAATGCTTTTATTGATCATAGTTTTGTTGGCTTGTGCAGAAACTTCCTGGATTGATGTCTCAGTCACTTTCTAGAGTTCAGATAAGCACCATGGCGGTTAAAGAAAATCTGGTTGTTGCTGGTGGTTTTCAAGGGGAACTTATTTGCAAGGTGTGCAAGTTGGGAGTTAAAACATATGTAGCACACACTTGATAACTTCCTACTCAGTTTCCTTGTATTACTGAACATCTGATTTTTGTTTTTCTTATTCTTCATTCAGTACCTAAATCATCCAGAGGTTGCATTCTGTACAAAGATTACAGCAAATGAGAATGCTATCACTAATGCTGTGGATATTTACCGAGATTCAGTGTAAGCACCATTAGGAATTATTAATGAGCAAAATTGTCCGAGTAAACTATTATGTTTCCAATGTATGTACACTAGCATAAAAAAAAAAAAAAAGACCGTTGATAATCTTCTCTTTAATGCAGGAGTGGAATAAGGATCATGACGGCAAATAACGATTGCAAAATCAGGATTTACGATGCTGAGTGTTTTTCTTCCCTTGGTTGCTTCTCATTCGACTGGTCTGTAAATGTGAGTGCCATCCACTTGGTTTTTCTTTATCACTGTTTTGATAATTTGAAGGCACCCCTAACACGGTTCTCTCACAGAACACATCCGTCAGTCCAGATGGTAAAATGCTTGCTGTTCTTGGGGACAGTCCAGATTGCTTGATCACTGATGCAAATTCTGGCCGAGTGAGTACTTCTTACCTTTTCATTTGCATGTTTATTGTACTTGGTTTTAGGAATAGGATGGGCAATAGAATTATTGGTTGAATACTAAAATGGAAGGGGTTTTGAACAGGCTATTGGATGCCTTCAAGGGCACTTAGACTATTCATTTAGCTCAGCATGGCACCCAAATGGCCATATTCTGGCCACAGGAAACCAAGATACAACCTGTAGGCTATGGGATGTGAGGAAAATGTCGGAGTCCATGGGTGTTCTAAAAGGAAGGATGGGAGCTATAAGAGCTTTAAAATTCACATCGGATGGTAGATTTTTGGCTATGGCTGAGCCAGCAGACTTCGTCCATATCTTTGATACCCAATCTGGGTACGTTGAAGGCCAAGAGATTGATATGTTTGGAGAAATAGCAGGCATATCCTTCAGCCCTGATGCTGAATCTCTTTTTGTTGGTGTGTCGGATCGAACCTATGGTAGCTTATTAGAATTCAACAGGAGGCGTGAGAATAGGTATCTGGACTCCATCATTTAGTGCAACCATTCTTTTAGTGATGTGAATGTACGTACGTGTAAATAACTTTCCAAGGATTCGTATGTGTGTGGATTATTATGTAAAGGGAAAGGAGAAAAAGGTTTGTATATAGAAGTTGAGAGAAAAAAGAGAGGCTGCCTGTTTGGATTTCAAGTTCAGTGCTCAAGCTTCCTTGATTTCAACGAAATATTCAAAGTTCTCTTTTTTGATCTTCAAAGTAGCACACATGAATTAATATCTGATGATATTTATTTAAAATGGTTGGTTGTTCTTTATGATACTGTTTTAAACAAGCGAATCTCTGTGCCATATATTGATATAGGAAAATGAAAGCAACCTTCTCCTTTGAGAAGGCTAGAAACCTCTCCCAGTAAAATCTAAAAAATGCTAATCCCCAAAATATTCTCTTTATAATATATCCCCCTTACAAGTAGTAGTGGGTCCTCAGGTATATATCCCTCCCCTCCCAGTGGCACTTTTATTCCCCAATTCAGTGCATTTCTCTTTTTGCCCCTTTCTCTT

Coding sequence (CDS)

ATGCAGAACTATTCAGTATTGCACTGGTCTTCATTGCTTCGAAGGAGCAAAGAAGTACTAAATGTAGCTAAACCAGTTGTTCCCACTCTGAAACTTCCTGGATTGATGTCTCAGTCACTTTCTAGAGTTCAGATAAGCACCATGGCGGTTAAAGAAAATCTGGTTGTTGCTGGTGGTTTTCAAGGGGAACTTATTTGCAAGTACCTAAATCATCCAGAGGTTGCATTCTGTACAAAGATTACAGCAAATGAGAATGCTATCACTAATGCTGTGGATATTTACCGAGATTCAGTGAGTGGAATAAGGATCATGACGGCAAATAACGATTGCAAAATCAGGATTTACGATGCTGAGTGTTTTTCTTCCCTTGGTTGCTTCTCATTCGACTGGTCTGTAAATAACACATCCGTCAGTCCAGATGGTAAAATGCTTGCTGTTCTTGGGGACAGTCCAGATTGCTTGATCACTGATGCAAATTCTGGCCGAGCTATTGGATGCCTTCAAGGGCACTTAGACTATTCATTTAGCTCAGCATGGCACCCAAATGGCCATATTCTGGCCACAGGAAACCAAGATACAACCTGTAGGCTATGGGATGTGAGGAAAATGTCGGAGTCCATGGGTGTTCTAAAAGGAAGGATGGGAGCTATAAGAGCTTTAAAATTCACATCGGATGGTAGATTTTTGGCTATGGCTGAGCCAGCAGACTTCGTCCATATCTTTGATACCCAATCTGGGTACGTTGAAGGCCAAGAGATTGATATGTTTGGAGAAATAGCAGGCATATCCTTCAGCCCTGATGCTGAATCTCTTTTTGTTGGTGTGTCGGATCGAACCTATGGTAGCTTATTAGAATTCAACAGGAGGCGTGAGAATAGGTATCTGGACTCCATCATTTAG

Protein sequence

MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGFQGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECFSSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Homology
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BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match: Q9Y7K5 (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 0 

Query: 4   VLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSE 63
           V  DS D ++ D  S  ++     H D   + +WHPNG+ILATG QDTT ++WD+R + +
Sbjct: 276 VCTDSKDAMLIDIRS-NSVSAKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGK 335

Query: 64  SMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFS 123
           S   L  +M A+  L F+  G  LA+ E ADFV +FDT+  +   Q ID FGEIAG ++S
Sbjct: 336 SFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYS 395

Query: 124 PDAESLFVGVSDRTYGSLLEFNR 147
              +SLF+GV D   G +LEF R
Sbjct: 396 SSGDSLFIGVDDPMLGGILEFRR 416

[Close]
BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-12
Identity = 41/137 (29.93%), Postives = 70/137 (51.09%), Query Frame = 0 

Query: 1    MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
            +LA         + D  +GR +G L+GH +  +S+ + PNG I+AT + D T ++WD ++
Sbjct: 1076 LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135

Query: 61   MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
              + +  L G    +  + F+ DG+ LA A     V I+D  +G      I     ++ +
Sbjct: 1136 -GKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSV 1195

Query: 121  SFSPDAESLFVGVSDRT 138
            +FSPD E +  G  D+T
Sbjct: 1196 AFSPDGEVVASGSQDQT 1211

[Close]
BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match: Q9BVA0 (Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens OX=9606 GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 0 

Query: 13  ITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKGRM 72
           + D  + + +  L GH     S  +HP G  +A+G+QDT  +LWD+R+    +   +G  
Sbjct: 89  VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHS 148

Query: 73  GAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVG 132
            A+R L+F+ DG++LA A     V ++D  +G +  +     G +  + F P+   L  G
Sbjct: 149 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 208

Query: 133 VSDRT 138
            SDRT
Sbjct: 209 SSDRT 212

[Close]
BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match: Q8BG40 (Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus OX=10090 GN=Katnb1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 0 

Query: 13  ITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKGRM 72
           + D  + + +  L GH     S  +HP G  +A+G+QDT  +LWD+R+    +   +G  
Sbjct: 89  VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHS 148

Query: 73  GAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVG 132
            A+R L+F+ DG++LA A     V ++D  +G +  +     G +  + F P+   L  G
Sbjct: 149 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 208

Query: 133 VSDRT 138
            SDRT
Sbjct: 209 SSDRT 212

[Close]
BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match: Q4V7Y7 (Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis OX=8355 GN=katnb1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 45/137 (32.85%), Postives = 69/137 (50.36%), Query Frame = 0 

Query: 2   LAVLGDSPDCL-ITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 61
           L V G     L I D  + + +  L GH     S  +HP G  +A+G+ DT  +LWDVR+
Sbjct: 77  LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRR 136

Query: 62  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 121
               +   KG   A+R L+F+ DG++LA A     V ++D  +G +  +  +  G +  I
Sbjct: 137 KG-CVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 196

Query: 122 SFSPDAESLFVGVSDRT 138
            F P+   L  G +DRT
Sbjct: 197 EFHPNEYLLASGSADRT 212

[Close]
BLAST of Cucsat.G7826 vs. NCBI nr
Match: XP_031740344.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740345.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740346.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740347.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 3.58e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 159 MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 218

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 219 MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 278

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 279 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 315

[Close]
BLAST of Cucsat.G7826 vs. NCBI nr
Match: XP_031740343.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 3.83e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 161 MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 220

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 221 MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 280

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 281 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 317

[Close]
BLAST of Cucsat.G7826 vs. NCBI nr
Match: XP_004150943.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus] >KAE8649638.1 hypothetical protein Csa_012057 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 2.89e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 296 MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 355

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 356 MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 415

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 416 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 452

[Close]
BLAST of Cucsat.G7826 vs. NCBI nr
Match: XP_038897976.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897977.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897978.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897979.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida])

HSP 1 Score: 314 bits (805), Expect = 1.13e-105
Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGR IGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 159 MLAVLGDSPDCLITDANSGRGIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 218

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESM VLKGRMGAIRA+KFTSDGRF+AMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 219 MSESMAVLKGRMGAIRAVKFTSDGRFMAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 278

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLF+GVSDRTYGSLLEFNRRREN YLDS+I
Sbjct: 279 SFSPDAESLFIGVSDRTYGSLLEFNRRRENTYLDSVI 315

[Close]
BLAST of Cucsat.G7826 vs. NCBI nr
Match: XP_038897975.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Benincasa hispida])

HSP 1 Score: 314 bits (805), Expect = 8.46e-104
Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGR IGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 295 MLAVLGDSPDCLITDANSGRGIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 354

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESM VLKGRMGAIRA+KFTSDGRF+AMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 355 MSESMAVLKGRMGAIRAVKFTSDGRFMAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 414

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLF+GVSDRTYGSLLEFNRRREN YLDS+I
Sbjct: 415 SFSPDAESLFIGVSDRTYGSLLEFNRRRENTYLDSVI 451

[Close]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match: A0A0A0KY98 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378260 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.86e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 161 MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 220

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 221 MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 280

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 281 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 317

[Close]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match: A0A5A7VB29 (Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001780 PE=4 SV=1)

HSP 1 Score: 312 bits (799), Expect = 3.41e-103
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWHPNG ILATGNQDTTCRLWDVRK
Sbjct: 296 MLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWHPNGRILATGNQDTTCRLWDVRK 355

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 356 MSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 415

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 416 SFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 452

[Close]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match: A0A1S3B9K1 (uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=LOC103487546 PE=4 SV=1)

HSP 1 Score: 312 bits (799), Expect = 3.41e-103
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           MLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWHPNG ILATGNQDTTCRLWDVRK
Sbjct: 296 MLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWHPNGRILATGNQDTTCRLWDVRK 355

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI
Sbjct: 356 MSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 415

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
           SFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 416 SFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 452

[Close]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match: A0A6J1FAK6 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111443576 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 4.99e-103
Identity = 145/157 (92.36%), Postives = 154/157 (98.09%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           +LAVLGDSP CLITDANSGRAIGCLQGHLDYSF+SAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 143 LLAVLGDSPGCLITDANSGRAIGCLQGHLDYSFTSAWHPNGHILATGNQDTTCRLWDVRK 202

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSES+ VLKGRMGAIRA+KF+SDGRF+AMAEPADFVHIFDTQSGY+EGQEIDMFGEIAGI
Sbjct: 203 MSESIAVLKGRMGAIRAVKFSSDGRFMAMAEPADFVHIFDTQSGYIEGQEIDMFGEIAGI 262

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
            FSPDAESLFVGVSDRTYGSLLEFNRRR+NRYLDS+I
Sbjct: 263 CFSPDAESLFVGVSDRTYGSLLEFNRRRDNRYLDSMI 299

[Close]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match: A0A6J1FFI3 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443576 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 8.48e-103
Identity = 145/157 (92.36%), Postives = 154/157 (98.09%), Query Frame = 0 

Query: 1   MLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRK 60
           +LAVLGDSP CLITDANSGRAIGCLQGHLDYSF+SAWHPNGHILATGNQDTTCRLWDVRK
Sbjct: 159 LLAVLGDSPGCLITDANSGRAIGCLQGHLDYSFTSAWHPNGHILATGNQDTTCRLWDVRK 218

Query: 61  MSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGI 120
           MSES+ VLKGRMGAIRA+KF+SDGRF+AMAEPADFVHIFDTQSGY+EGQEIDMFGEIAGI
Sbjct: 219 MSESIAVLKGRMGAIRAVKFSSDGRFMAMAEPADFVHIFDTQSGYIEGQEIDMFGEIAGI 278

Query: 121 SFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 157
            FSPDAESLFVGVSDRTYGSLLEFNRRR+NRYLDS+I
Sbjct: 279 CFSPDAESLFVGVSDRTYGSLLEFNRRRDNRYLDSMI 315

The following BLAST results are available for this feature:
BLAST of Cucsat.G7826 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9Y7K53.3e-2744.06Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pomb... [more]
Q8YTC23.0e-1229.93Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7... [more]
Q9BVA01.9e-1131.20Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens OX=9606 GN=KATNB1 ... [more]
Q8BG401.9e-1131.20Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus OX=10090 GN=Katnb1... [more]
Q4V7Y71.9e-1132.85Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis OX=8355 GN=katnb... [more]
BLAST of Cucsat.G7826 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740344.13.58e-109100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus... [more]
XP_031740343.13.83e-109100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus... [more]
XP_004150943.12.89e-107100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus... [more]
XP_038897976.11.13e-10595.54uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispi... [more]
XP_038897975.18.46e-10495.54uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Benincasa hispi... [more]
BLAST of Cucsat.G7826 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY981.86e-109100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G... [more]
A0A5A7VB293.41e-10395.54Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3B9K13.41e-10395.54uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1FAK64.99e-10392.36uncharacterized WD repeat-containing protein C2A9.03-like isoform X4 OS=Cucurbit... [more]
A0A6J1FFI38.48e-10392.36uncharacterized WD repeat-containing protein C2A9.03-like isoform X3 OS=Cucurbit... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 160..199
e-value: 1.7E-6
score: 37.6
coord: 203..242
e-value: 7.1
score: 11.6
coord: 61..116
e-value: 170.0
score: 2.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 164..199
e-value: 1.3E-4
score: 22.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 167..208
score: 13.516088
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 68..294
e-value: 2.2E-32
score: 114.3
NoneNo IPR availablePANTHERPTHR43991:SF12OS03G0386000 PROTEINcoord: 1..298
NoneNo IPR availablePANTHERPTHR43991WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATEDcoord: 1..298
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 167..201
score: 11.049229
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 186..200
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 44..279

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7826.T1Cucsat.G7826.T1mRNA
Cucsat.G7826.T8Cucsat.G7826.T8mRNA
Cucsat.G7826.T9Cucsat.G7826.T9mRNA
Cucsat.G7826.T7Cucsat.G7826.T7mRNA
Cucsat.G7826.T4Cucsat.G7826.T4mRNA
Cucsat.G7826.T6Cucsat.G7826.T6mRNA
Cucsat.G7826.T5Cucsat.G7826.T5mRNA
Cucsat.G7826.T2Cucsat.G7826.T2mRNA
Cucsat.G7826.T3Cucsat.G7826.T3mRNA
Cucsat.G7826.T10Cucsat.G7826.T10mRNA
Cucsat.G7826.T11Cucsat.G7826.T11mRNA
Cucsat.G7826.T12Cucsat.G7826.T12mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding