Cucsat.G7826.T10 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7826.T10
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransducin/WD40 repeat-like superfamily protein
Locationctg1556: 1870698 .. 1873175 (+)
RNA-Seq ExpressionCucsat.G7826.T10
SyntenyCucsat.G7826.T10
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTCATCCCAACTTCTCTACACCTTTCTCTCTAATCATCTTTCTTCTTCTTCTCTTTCTCCCATTCAATTCAATCCAATCCAATCCAATCCTTCTCAAATCATCAATTCTCTCTCAATCTTTTTGTTCCATCTCCTCTTTTTGCTTTTTACGACCGCTACGCATTCTCAGTTCATTTATTCACAACCGCTTCTGTCTTCTCCTTCTTCTTCCTTCACTGCCATTTTAATTCTCTACTCGCTTGTTAGGTATTATTCCTTTTCTCTTTTATGTATTCTATATTCAGTTCTTTTCTACTATGACCCCTGCTTCTGCGAGGTCGGTTTTGTGATTATTCATGGAACTTCAAACAATCGTCCAATCCTATTTTTCAGTTATAATGTGTATGATTTTTTAGATGACTTTTCGTGGAGCGTAGTCATGAATTTTTCCTGAGTTTGGATATGTTTTTCTTCTGTTCTTCTTTGGTTTCTCATTCCTAGCTGTTTGTTTTGCGGTCTTGGTTTATGTTTTCGTTTGCTGGATAAATTTTAGAAAGCACGTTTCTCATTTTGTAGATCCATGGAAAATTTTGGAAACGACTTCCTTGATTATCTTGTTGATGACGATTATTACGACGTGGCTAATTTCGATGACGACTCCTCTTTTGGTGATGACGAAACGCAGAGGAGTAGCGATGTAGATTCTCTGGACTCTGATTTCGAAGATGATTTTGAGATGGTATATTGTCTGTGTGGCTTTCTATTTCTTGTCCTCTTTACGTTAGTTTTGGTTAGGGGAAAAAACAATTACTGAAAATGACGTTTGGCTTCAACAGAGCAAGTCAAGAACTGATACGTCTGCATTGGAAGCTAGAAATGGGAAAGATATACAAGGTATACCTTGGGAGAGGCTTCATTTTACAAGGGAAAAGTGCCGTGAGACACGTTTGAAACAGTACAAAAACTATGAGAACCTCTCACGCCCTCGCCAAGACCTCGAAAAGGTCAGTGGCTCTGTCGTTATCTCACTTTTATTTTGGCCATTGCTTAATTCTTTCTCTTTTATAACCACGAGAGAATCGATCTTCTTACGTCCTTTTGGGAACCAAAAAATTTGAAAATGGGATATGTCGATTTTGTTTGGCAAGTTGCGTTTGATTCAAGTAATCTTACTCTCTCGTGTAATTCCTAATTTACTTTCCTGGTTTTTAAATAATATAAGATAAGGAGATATTATTCATTCACTTTTTCGGAAGCCCCTTGCGTACTTTCCTTTATCCCGTTTCAGAAATTGAGAACAAACACTTTCATGATTGAAGAATAAACTTTCAAACCATGTTACGTTTATTTATTTATTTTAAAAAATAAGTTGGTTTTCTTGCCCTTTCTTGTTAAACAGGAATGCTTGCAAGTAGAGATGGGACATGCTTTCTATGACTTTCAGTTCAATACCAGACTTGTCAAGTCAACAATTGTGCATTTCCAGGTTGAGATTCTTATTCATAGTGTTTGTTTTCCTTCTCTGTCGTAATGGATACTTATTTCCGTTTTAGATATTCTTATTTATGGCTCTTTAGTTTGGAATTGTTTTTATTTTTCCTTCGTGAGGTTGACTACACAGTCCCTGTATCGTCTTTGTATTTTTTTTTTTAATAATAAAAAACATATATTTTTTCTTTTCTGCCTATTTTCGTGTTCGGTTGTCCTTTTATCCACAGAGCATGCTCAGTTTGGGAAAAAGTAGTAGTCTGCCGTGGTTGATTTTGATTTGTTGGGCCTTTTACAAATTTGGCGTTAGAAGATATAATTAAATTTAGTGGAGCAGATGGGTTTCGTAGTGATTTCAAATAGATCTAATCTTAATACACGCCTGGTCAGGTAGATATTTCTTTTTGATTTATAAATATGTGTCCTATCAAGAAACAGTTTCCTGTTCAAGATGCAAACAGTTACCCCCACAGCCATTATTAGTCATATTTTACCTGAACATGTTCTCCTCTGTCATGGATTCAACCGCAATAGGATTAATCTTTTATCAGTTGTGGTCGTTCAGATCATTGAGTTAGAGATTTACTTTTATGCTTGTGGTATGTACTATTCCTTATAGTACTTAACACTGTTTTGCTATTGATTCTCCCAAGTGTCTGAACTAATTCTGTGGAGCAATTCTGATAAATAACTGTACAGTCAACCTCTATTTTTCTTCTTTTAGAATCATTTTGTTTTTCCCTGTAGATGTAATGTGTCTGTTGTTCGTGTATCCTTATATTTTGTTTCAAATTTTTTTATGACGAAGTTGTAGATGCGTTGCTTATTGGCTGTTAACCATGATATATGAAATTAACCTCTCTTTGCTATTTAGGACTGCTATTTCACTTTATTTCAGCATGTAAAGCAGGTGGGAGTTATAACTGAGCAGCTGGCGCAACCTTGAAATGGTATGACAGGAAACCGTCTGAGCATTTAAGCCATAAGAGGCCGTATGAAAATTGCTT

Coding sequence (CDS)

TTTTCATCCCAACTTCTCTACACCTTTCTCTCTAATCATCTTTCTTCTTCTTCTCTTTCTCCCATTCAATTCAATCCAATCCAATCCAATCCTTCTCAAATCATCAATTCTCTCTCAATCTTTTTGTTCCATCTCCTCTTTTTGCTTTTTACGACCGCTACGCATTCTCAGTTCATTTATTCACAACCGCTTCTGTCTTCTCCTTCTTCTTCCTTCACTGCCATTTTAATTCTCTACTCGCTTGTTAGATCCATGGAAAATTTTGGAAACGACTTCCTTGATTATCTTGTTGATGACGATTATTACGACGTGGCTAATTTCGATGACGACTCCTCTTTTGGTGATGACGAAACGCAGAGGAGTAGCGATGTAGATTCTCTGGACTCTGATTTCGAAGATGATTTTGAGATGAGCAAGTCAAGAACTGATACGTCTGCATTGGAAGCTAGAAATGGGAAAGATATACAAGGTATACCTTGGGAGAGGCTTCATTTTACAAGGGAAAAGTGCCGTGAGACACGTTTGAAACAGTACAAAAACTATGAGAACCTCTCACGCCCTCGCCAAGACCTCGAAAAGGAATGCTTGCAAGTAGAGATGGGACATGCTTTCTATGACTTTCAGTTCAATACCAGACTTGTCAAGTCAACAATTGTGCATTTCCAGGACTGCTATTTCACTTTATTTCAGCATGTAAAGCAGGTGGGAGTTATAACTGAGCAGCTGGCGCAACCTTGA

Protein sequence

FSSQLLYTFLSNHLSSSSLSPIQFNPIQSNPSQIINSLSIFLFHLLFLLFTTATHSQFIYSQPLLSSPSSSFTAILILYSLVRSMENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDTSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAFYDFQFNTRLVKSTIVHFQDCYFTLFQHVKQVGVITEQLAQP
Homology
[Close]
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match: XP_004150943.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus] >KAE8649638.1 hypothetical protein Csa_012057 [Cucumis sativus])

HSP 1 Score: 272 bits (696), Expect = 7.80e-86
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT
Sbjct: 1   MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF
Sbjct: 61  SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           YDFQFNTRLVKSTIVHFQ
Sbjct: 121 YDFQFNTRLVKSTIVHFQ 138

[Close]
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match: XP_008444107.1 (PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Cucumis melo] >KAA0064227.1 putative WD repeat-containing protein C2A9.03 [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (686), Expect = 2.49e-84
Identity = 135/138 (97.83%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MENFGNDFLDYLVD+DYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT
Sbjct: 1   MENFGNDFLDYLVDEDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SAL+ARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALDARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           YDFQFNTRLVKSTIVHFQ
Sbjct: 121 YDFQFNTRLVKSTIVHFQ 138

[Close]
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match: XP_038897975.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 1.56e-76
Identity = 129/138 (93.48%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MEN GNDFLDYLVDD YYDVANFDDDSSFGD ETQRSSDV+SLDSDFEDDFE SKSRTDT
Sbjct: 1   MENLGNDFLDYLVDD-YYDVANFDDDSSFGDGETQRSSDVESLDSDFEDDFETSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SALEARNGKDIQGI WERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGH F
Sbjct: 61  SALEARNGKDIQGISWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHGF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           Y FQFNTRLVKSTIVHFQ
Sbjct: 121 YHFQFNTRLVKSTIVHFQ 137

[Close]
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match: XP_023534846.1 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248 bits (632), Expect = 3.12e-76
Identity = 126/138 (91.30%), Postives = 132/138 (95.65%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MEN GNDFLDYLVDD YYDV NFDDDS FGDDETQR+SD +S+D DFE+DFEMSKSRTDT
Sbjct: 1   MENLGNDFLDYLVDD-YYDVDNFDDDSFFGDDETQRNSDAESMDDDFEEDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           Y+FQFNTRLVKSTIVHFQ
Sbjct: 121 YNFQFNTRLVKSTIVHFQ 137

[Close]
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match: KAG6591753.1 (hypothetical protein SDJN03_14099, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (634), Expect = 7.06e-76
Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 84  SMENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTD 143
           SMEN GNDFLDYLVDD YYDV NFD+DS FGDDETQR+SD +SLD DFE+DFEMSKSRTD
Sbjct: 58  SMENLGNDFLDYLVDD-YYDVDNFDEDSFFGDDETQRNSDAESLDDDFEEDFEMSKSRTD 117

Query: 144 TSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHA 203
           TSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHA
Sbjct: 118 TSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHA 177

Query: 204 FYDFQFNTRLVKSTIVHFQ 222
           FY+FQFNTRLVKSTIVHFQ
Sbjct: 178 FYNFQFNTRLVKSTIVHFQ 195

[Close]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match: A0A5A7VB29 (Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001780 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 1.21e-84
Identity = 135/138 (97.83%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MENFGNDFLDYLVD+DYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT
Sbjct: 1   MENFGNDFLDYLVDEDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SAL+ARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALDARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           YDFQFNTRLVKSTIVHFQ
Sbjct: 121 YDFQFNTRLVKSTIVHFQ 138

[Close]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match: A0A1S3B9K1 (uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=LOC103487546 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 1.21e-84
Identity = 135/138 (97.83%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MENFGNDFLDYLVD+DYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT
Sbjct: 1   MENFGNDFLDYLVDEDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SAL+ARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALDARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           YDFQFNTRLVKSTIVHFQ
Sbjct: 121 YDFQFNTRLVKSTIVHFQ 138

[Close]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match: A0A6J1IDK0 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474295 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 1.20e-75
Identity = 125/138 (90.58%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MEN GNDFLDYLVDD YYDV NFDDDS FGDDE QR+SD +S+D DFE+DFEMSKSRTDT
Sbjct: 1   MENLGNDFLDYLVDD-YYDVDNFDDDSFFGDDEAQRNSDAESVDDDFEEDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           Y+FQFNTRLVKSTIVHFQ
Sbjct: 121 YNFQFNTRLVKSTIVHFQ 137

[Close]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match: A0A6J1F9R9 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443576 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 1.20e-75
Identity = 125/138 (90.58%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEMSKSRTDT 144
           MEN GNDFLDYLVDD YYDV NFD+DS FGDDETQR+ D +SLD DFE+DFEMSKSRTDT
Sbjct: 1   MENLGNDFLDYLVDD-YYDVDNFDEDSFFGDDETQRNGDAESLDDDFEEDFEMSKSRTDT 60

Query: 145 SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAF 204
           SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMGHAF
Sbjct: 61  SALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMGHAF 120

Query: 205 YDFQFNTRLVKSTIVHFQ 222
           Y+FQFNTRLVKSTIVHFQ
Sbjct: 121 YNFQFNTRLVKSTIVHFQ 137

[Close]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match: A0A6J1IJT4 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474295 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.62e-73
Identity = 125/141 (88.65%), Postives = 131/141 (92.91%), Query Frame = 0 

Query: 85  MENFGNDFLDYLVDDDYYDVANFDDDSSFGDDETQRSSDVDSLDSDFEDDFEM---SKSR 144
           MEN GNDFLDYLVDD YYDV NFDDDS FGDDE QR+SD +S+D DFE+DFEM   SKSR
Sbjct: 1   MENLGNDFLDYLVDD-YYDVDNFDDDSFFGDDEAQRNSDAESVDDDFEEDFEMLRQSKSR 60

Query: 145 TDTSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMG 204
           TDTSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPR+DLEKECLQVEMG
Sbjct: 61  TDTSALEARNGKDIQGIPWERLHFTREKCRETRLKQYKNYENLSRPREDLEKECLQVEMG 120

Query: 205 HAFYDFQFNTRLVKSTIVHFQ 222
           HAFY+FQFNTRLVKSTIVHFQ
Sbjct: 121 HAFYNFQFNTRLVKSTIVHFQ 140

The following BLAST results are available for this feature:
BLAST of Cucsat.G7826.T10 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G7826.T10 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150943.17.80e-86100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus... [more]
XP_008444107.12.49e-8497.83PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Cucumis melo] >... [more]
XP_038897975.11.56e-7693.48uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Benincasa hispi... [more]
XP_023534846.13.12e-7691.30uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Cucurbita ... [more]
KAG6591753.17.06e-7691.37hypothetical protein SDJN03_14099, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cucsat.G7826.T10 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VB291.21e-8497.83Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3B9K11.21e-8497.83uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1IDK01.20e-7590.58uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 OS=Cucurbit... [more]
A0A6J1F9R91.20e-7590.58uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 OS=Cucurbit... [more]
A0A6J1IJT41.62e-7388.65uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbit... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..145
NoneNo IPR availablePANTHERPTHR43991WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATEDcoord: 85..222
NoneNo IPR availablePANTHERPTHR43991:SF12OS03G0386000 PROTEINcoord: 85..222

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7826Cucsat.G7826gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T10.E1Cucsat.G7826.T10.E1exon
Cucsat.G7826.T10.E2Cucsat.G7826.T10.E2exon
Cucsat.G7826.T10.E3Cucsat.G7826.T10.E3exon
Cucsat.G7826.T10.E4Cucsat.G7826.T10.E4exon
Cucsat.G7826.T10.E5Cucsat.G7826.T10.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T10.C1Cucsat.G7826.T10.C1CDS
Cucsat.G7826.T10.C2Cucsat.G7826.T10.C2CDS
Cucsat.G7826.T10.C3Cucsat.G7826.T10.C3CDS
Cucsat.G7826.T10.C4Cucsat.G7826.T10.C4CDS
Cucsat.G7826.T10.C5Cucsat.G7826.T10.C5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T10Cucsat.G7826.T10-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding