Cucsat.G7826.T12 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7826.T12
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransducin/WD40 repeat-like superfamily protein
Locationctg1556: 1874284 .. 1876452 (+)
RNA-Seq ExpressionCucsat.G7826.T12
SyntenyCucsat.G7826.T12
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCCAGCTGACAAGCTAGTCAAGTATTTTGCTTTCTGGAGTTTGTTGAAACAAACAAACCGGAGTATCTTTTTGATTGATTATTTCTTACTTGTTTTGTTTCCATCATTTTGGTGATTTAATAACTCCTAAACATTCTTAATATATTCATTGACGTATCCACCAACTTCTGTTTTTCAATCTTTGCAGCTGAGAAATCTGTTATGGGCAACTTCCAAGCATGATGTATATCTAATGCAGAACTATTCAGTATTGCACTGGTCTTCATTGCTTCGAAGGAGCAAAGAAGTACTAAATGTAGCTAAACCAGTTGTTCCCACTCTGGTATGCAGTGCTTTGTTGGAAAATGTTTTTCCACACTAATGCCTGGCTCTTAAAGTTATCCTTTCCAGATCATTGAATGCTTTTATTGATCATAGTTTTGTTGGCTTGTGCAGAAACTTCCTGGATTGATGTCTCAGTCACTTTCTAGAGTTCAGATAAGCACCATGGCGGTTAAAGAAAATCTGGTTGTTGCTGGTGGTTTTCAAGGGGAACTTATTTGCAAGGTGTGCAAGTTGGGAGTTAAAACATATGTAGCACACACTTGATAACTTCCTACTCAGTTTCCTTGTATTACTGAACATCTGATTTTTGTTTTTCTTATTCTTCATTCAGTACCTAAATCATCCAGAGGTTGCATTCTGTACAAAGATTACAGCAAATGAGAATGCTATCACTAATGCTGTGGATATTTACCGAGATTCAGTGTAAGCACCATTAGGAATTATTAATGAGCAAAATTGTCCGAGTAAACTATTATGTTTCCAATGTATGTACACTAGCATAAAAAAAAAAAAAAAGACCGTTGATAATCTTCTCTTTAATGCAGGAGTGGAATAAGGATCATGACGGCAAATAACGATTGCAAAATCAGGATTTACGATGCTGAGTGTTTTTCTTCCCTTGGTTGCTTCTCATTCGACTGGTCTGTAAATGTGAGTGCCATCCACTTGGTTTTTCTTTATCACTGTTTTGATAATTTGAAGGCACCCCTAACACGGTTCTCTCACAGAACACATCCGTCAGTCCAGATGGTAAAATGCTTGCTGTTCTTGGGGACAGTCCAGATTGCTTGATCACTGATGCAAATTCTGGCCGAGTGAGTACTTCTTACCTTTTCATTTGCATGTTTATTGTACTTGGTTTTAGGAATAGGATGGGCAATAGAATTATTGGTTGAATACTAAAATGGAAGGGGTTTTGAACAGGCTATTGGATGCCTTCAAGGGCACTTAGACTATTCATTTAGCTCAGCATGGCACCCAAATGGCCATATTCTGGCCACAGGAAACCAAGATACAACCTGTAGGCTATGGGATGTGAGGAAAATGTCGGAGTCCATGGGTGTTCTAAAAGGAAGGATGGGAGCTATAAGAGCTTTAAAATTCACATCGGATGGTAGATTTTTGGCTATGGCTGAGCCAGCAGACTTCGTCCATATCTTTGATACCCAATCTGGGTACGTTGAAGGCCAAGAGATTGATATGTTTGGAGAAATAGCAGGCATATCCTTCAGCCCTGATGCTGAATCTCTTTTTGTTGGTGTGTCGGATCGAACCTATGGTAGCTTATTAGAATTCAACAGGAGGCGTGAGAATAGGTATCTGGACTCCATCATTTAGTGCAACCATTCTTTTAGTGATGTGAATGTACGTACGTGTAAATAACTTTCCAAGGATTCGTATGTGTGTGGATTATTATGTAAAGGGAAAGGAGAAAAAGGTTTGTATATAGAAGTTGAGAGAAAAAAGAGAGGCTGCCTGTTTGGATTTCAAGTTCAGTGCTCAAGCTTCCTTGATTTCAACGAAATATTCAAAGTTCTCTTTTTTGATCTTCAAAGTAGCACACATGAATTAATATCTGATGATATTTATTTAAAATGGTTGGTTGTTCTTTATGATACTGTTTTAAACAAGCGAATCTCTGTGCCATATATTGATATAGGAAAATGAAAGCAACCTTCTCCTTTGAGAAGGCTAGAAACCTCTCCCAGTAAAATCTAAAAAATGCTAATCCCCAAAATATTCTCTTTATAATATATCCCCCTTACAAGTAGTAGTGGGTCCTCAGGTATATATCCCTCCCCTCCCAGTGGCACTTTTATTCCCCAATTCAGTGCATTTCTCT

Coding sequence (CDS)

ATGCAGAACTATTCAGTATTGCACTGGTCTTCATTGCTTCGAAGGAGCAAAGAAGTACTAAATGTAGCTAAACCAGTTGTTCCCACTCTGAAACTTCCTGGATTGATGTCTCAGTCACTTTCTAGAGTTCAGATAAGCACCATGGCGGTTAAAGAAAATCTGGTTGTTGCTGGTGGTTTTCAAGGGGAACTTATTTGCAAGTACCTAAATCATCCAGAGGTTGCATTCTGTACAAAGATTACAGCAAATGAGAATGCTATCACTAATGCTGTGGATATTTACCGAGATTCAGTGAGTGGAATAAGGATCATGACGGCAAATAACGATTGCAAAATCAGGATTTACGATGCTGAGTGTTTTTCTTCCCTTGGTTGCTTCTCATTCGACTGGTCTGTAAATAACACATCCGTCAGTCCAGATGGTAAAATGCTTGCTGTTCTTGGGGACAGTCCAGATTGCTTGATCACTGATGCAAATTCTGGCCGAGCTATTGGATGCCTTCAAGGGCACTTAGACTATTCATTTAGCTCAGCATGGCACCCAAATGGCCATATTCTGGCCACAGGAAACCAAGATACAACCTGTAGGCTATGGGATGTGAGGAAAATGTCGGAGTCCATGGGTGTTCTAAAAGGAAGGATGGGAGCTATAAGAGCTTTAAAATTCACATCGGATGGTAGATTTTTGGCTATGGCTGAGCCAGCAGACTTCGTCCATATCTTTGATACCCAATCTGGGTACGTTGAAGGCCAAGAGATTGATATGTTTGGAGAAATAGCAGGCATATCCTTCAGCCCTGATGCTGAATCTCTTTTTGTTGGTGTGTCGGATCGAACCTATGGTAGCTTATTAGAATTCAACAGGAGGCGTGAGAATAGGTATCTGGACTCCATCATTTAG

Protein sequence

MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGFQGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECFSSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Homology
BLAST of Cucsat.G7826.T12 vs. ExPASy Swiss-Prot
Match: Q9Y7K5 (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 6.7e-29
Identity = 72/199 (36.18%), Postives = 110/199 (55.28%), Query Frame = 0

Query: 96  DSVSGIRIMTAN------NDCKIRIYDAECFSSLGCFSFDWSVNNTSVSPDGKMLAVLGD 155
           DS++ I++ +        ND  + + D +  S +  +    +VN   +  +  +  V  D
Sbjct: 220 DSINHIQLFSEKKFILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTD 279

Query: 156 SPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGV 215
           S D ++ D  S  ++     H D   + +WHPNG+ILATG QDTT ++WD+R + +S   
Sbjct: 280 SKDAMLIDIRS-NSVSAKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRN 339

Query: 216 LKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAE 275
           L  +M A+  L F+  G  LA+ E ADFV +FDT+  +   Q ID FGEIAG ++S   +
Sbjct: 340 LGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYSSSGD 399

Query: 276 SLFVGVSDRTYGSLLEFNR 289
           SLF+GV D   G +LEF R
Sbjct: 400 SLFIGVDDPMLGGILEFRR 416

BLAST of Cucsat.G7826.T12 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-16
Identity = 52/180 (28.89%), Postives = 92/180 (51.11%), Query Frame = 0

Query: 103  IMTANNDCKIRIYD---AECFSSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDAN 162
            I T + DC +++++    +C  +L   S    +   + SPDG++LA         + D  
Sbjct: 1035 IATGSADCTVKLWNISTGQCLKTLSEHSD--KILGMAWSPDGQLLASASADQSVRLWDCC 1094

Query: 163  SGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRA 222
            +GR +G L+GH +  +S+ + PNG I+AT + D T ++WD ++  + +  L G    +  
Sbjct: 1095 TGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ-GKCLKTLTGHTNWVFD 1154

Query: 223  LKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRT 280
            + F+ DG+ LA A     V I+D  +G      I     ++ ++FSPD E +  G  D+T
Sbjct: 1155 IAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQT 1211

BLAST of Cucsat.G7826.T12 vs. ExPASy Swiss-Prot
Match: Q8YRI1 (Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr3466 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 0

Query: 85   NAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECFSSLGCFSFDWS-VNNTSVSPDGKM 144
            N+  N+V   +D   G  + + ++D  +R++D      L  F    S V +   SP+  M
Sbjct: 906  NSWVNSVGFSQD---GKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLM 965

Query: 145  LAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKM 204
            LA         + D +SG  +   QGH  + +S A++ +G +LATG+ D T RLWD+   
Sbjct: 966  LASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI-SS 1025

Query: 205  SESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGIS 264
            S+   + +G    +R++ F+SDG  LA       V ++D  SG            +  + 
Sbjct: 1026 SQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVV 1085

Query: 265  FSPDAESLFVGVSDR 279
            FSPD   L  G  D+
Sbjct: 1086 FSPDGAMLASGGDDQ 1096

BLAST of Cucsat.G7826.T12 vs. ExPASy Swiss-Prot
Match: Q00808 (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=2587412 GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-14
Identity = 58/187 (31.02%), Postives = 92/187 (49.20%), Query Frame = 0

Query: 97   SVSGIRIMTANNDCKIRIYDA---ECFSSL-GCFSFDWSVNNTSVSPDGKMLAVLGDSPD 156
            S  G R+ + ++D  I+I+DA    C  +L G     WSV   + SPDG+ +A       
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV---AFSPDGQRVASGSIDGT 1119

Query: 157  CLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMSESMGVLKG 216
              I DA SG     L+GH  +  S A+ P+G  +A+G+ D T ++WD          L+G
Sbjct: 1120 IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAAS-GTCTQTLEG 1179

Query: 217  RMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISFSPDAESLF 276
              G ++++ F+ DG+ +A       + I+DT SG          G +  ++FSPD + + 
Sbjct: 1180 HGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 1239

Query: 277  VGVSDRT 280
             G SD T
Sbjct: 1240 SGSSDNT 1242

BLAST of Cucsat.G7826.T12 vs. ExPASy Swiss-Prot
Match: Q9BVA0 (Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens OX=9606 GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 50/195 (25.64%), Postives = 90/195 (46.15%), Query Frame = 0

Query: 88  TNAVDIYRDSVSGIRIMTANNDCKIRIYD---AECFSSLGCFSFDWSVNNTSVSPDGKML 147
           +N   +     SG  + T  +DC++ ++      C  SL        V +  ++   +++
Sbjct: 21  SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVRLNTPEELI 80

Query: 148 AVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWHPNGHILATGNQDTTCRLWDVRKMS 207
                S    + D  + + +  L GH     S  +HP G  +A+G+QDT  +LWD+R+  
Sbjct: 81  VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 140

Query: 208 ESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHIFDTQSGYVEGQEIDMFGEIAGISF 267
             +   +G   A+R L+F+ DG++LA A     V ++D  +G +  +     G +  + F
Sbjct: 141 -CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 200

Query: 268 SPDAESLFVGVSDRT 280
            P+   L  G SDRT
Sbjct: 201 HPNEYLLASGSSDRT 212

BLAST of Cucsat.G7826.T12 vs. NCBI nr
Match: XP_031740344.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740345.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740346.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus] >XP_031740347.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus])

HSP 1 Score: 604 bits (1558), Expect = 7.64e-218
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 17  MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 76

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF
Sbjct: 77  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 136

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH
Sbjct: 137 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 196

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI
Sbjct: 197 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 256

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 257 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 315

BLAST of Cucsat.G7826.T12 vs. NCBI nr
Match: XP_031740343.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus])

HSP 1 Score: 604 bits (1558), Expect = 8.23e-218
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 19  MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 78

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF
Sbjct: 79  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 138

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH
Sbjct: 139 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 198

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI
Sbjct: 199 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 258

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 259 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 317

BLAST of Cucsat.G7826.T12 vs. NCBI nr
Match: XP_004150943.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus] >KAE8649638.1 hypothetical protein Csa_012057 [Cucumis sativus])

HSP 1 Score: 604 bits (1558), Expect = 1.17e-215
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 154 MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 213

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF
Sbjct: 214 QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 273

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH
Sbjct: 274 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 333

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI
Sbjct: 334 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 393

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 394 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 452

BLAST of Cucsat.G7826.T12 vs. NCBI nr
Match: XP_038897976.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897977.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897978.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida] >XP_038897979.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispida])

HSP 1 Score: 586 bits (1510), Expect = 1.59e-210
Identity = 286/299 (95.65%), Postives = 293/299 (97.99%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKE+LNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 17  MQNYSVLHWSSLLRRSKEILNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 76

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICK+LNHPEVAFCTKITANENAITNAVDIYRDSV G+RIM ANNDCKIRIYDAE F
Sbjct: 77  QGELICKFLNHPEVAFCTKITANENAITNAVDIYRDSVGGVRIMAANNDCKIRIYDAEIF 136

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGR IGCLQGHLDYSFSSAWH
Sbjct: 137 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRGIGCLQGHLDYSFSSAWH 196

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESM VLKGRMGAIRA+KFTSDGRF+AMAEPADFVHI
Sbjct: 197 PNGHILATGNQDTTCRLWDVRKMSESMAVLKGRMGAIRAVKFTSDGRFMAMAEPADFVHI 256

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPDAESLF+GVSDRTYGSLLEFNRRREN YLDS+I
Sbjct: 257 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFIGVSDRTYGSLLEFNRRRENTYLDSVI 315

BLAST of Cucsat.G7826.T12 vs. NCBI nr
Match: XP_008444107.1 (PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Cucumis melo] >KAA0064227.1 putative WD repeat-containing protein C2A9.03 [Cucumis melo var. makuwa])

HSP 1 Score: 588 bits (1516), Expect = 2.89e-209
Identity = 288/299 (96.32%), Postives = 293/299 (97.99%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 154 MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 213

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTK+TANENAITNAVDIYRDSV G +IMTANNDCKIRIYDAECF
Sbjct: 214 QGELICKYLNHPEVAFCTKVTANENAITNAVDIYRDSVGGTKIMTANNDCKIRIYDAECF 273

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWH
Sbjct: 274 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWH 333

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNG ILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHI
Sbjct: 334 PNGRILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHI 393

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 394 FDTQSGYVEGQEIDMFGEIAGISFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 452

BLAST of Cucsat.G7826.T12 vs. ExPASy TrEMBL
Match: A0A0A0KY98 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378260 PE=4 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 3.99e-218
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 19  MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 78

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF
Sbjct: 79  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 138

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH
Sbjct: 139 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 198

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI
Sbjct: 199 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 258

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII
Sbjct: 259 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 317

BLAST of Cucsat.G7826.T12 vs. ExPASy TrEMBL
Match: A0A5A7VB29 (Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001780 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 1.40e-209
Identity = 288/299 (96.32%), Postives = 293/299 (97.99%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 154 MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 213

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTK+TANENAITNAVDIYRDSV G +IMTANNDCKIRIYDAECF
Sbjct: 214 QGELICKYLNHPEVAFCTKVTANENAITNAVDIYRDSVGGTKIMTANNDCKIRIYDAECF 273

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWH
Sbjct: 274 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWH 333

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNG ILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHI
Sbjct: 334 PNGRILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHI 393

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 394 FDTQSGYVEGQEIDMFGEIAGISFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 452

BLAST of Cucsat.G7826.T12 vs. ExPASy TrEMBL
Match: A0A1S3B9K1 (uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=LOC103487546 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 1.40e-209
Identity = 288/299 (96.32%), Postives = 293/299 (97.99%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 154 MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 213

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTK+TANENAITNAVDIYRDSV G +IMTANNDCKIRIYDAECF
Sbjct: 214 QGELICKYLNHPEVAFCTKVTANENAITNAVDIYRDSVGGTKIMTANNDCKIRIYDAECF 273

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWH
Sbjct: 274 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWH 333

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNG ILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHI
Sbjct: 334 PNGRILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHI 393

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 394 FDTQSGYVEGQEIDMFGEIAGISFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 452

BLAST of Cucsat.G7826.T12 vs. ExPASy TrEMBL
Match: A0A5D3D4W6 (Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001270 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 4.24e-209
Identity = 288/299 (96.32%), Postives = 293/299 (97.99%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF
Sbjct: 185 MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 244

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTK+TANENAITNAVDIYRDSV G +IMTANNDCKIRIYDAECF
Sbjct: 245 QGELICKYLNHPEVAFCTKVTANENAITNAVDIYRDSVGGTKIMTANNDCKIRIYDAECF 304

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITD NSGRAIGCLQGHLDYSFSSAWH
Sbjct: 305 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDVNSGRAIGCLQGHLDYSFSSAWH 364

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNG ILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRA+KFTSDGRF+AMAEPADFVHI
Sbjct: 365 PNGRILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRAIKFTSDGRFMAMAEPADFVHI 424

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FDTQSGYVEGQEIDMFGEIAGISFSPD ESLFVGVSDRTYGSLLEFNRRRENRYLD +I
Sbjct: 425 FDTQSGYVEGQEIDMFGEIAGISFSPDTESLFVGVSDRTYGSLLEFNRRRENRYLDIMI 483

BLAST of Cucsat.G7826.T12 vs. ExPASy TrEMBL
Match: A0A6J1IIN5 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111474295 PE=4 SV=1)

HSP 1 Score: 567 bits (1461), Expect = 1.25e-203
Identity = 276/299 (92.31%), Postives = 289/299 (96.66%), Query Frame = 0

Query: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQSLSRVQISTMAVKENLVVAGGF 60
           MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQ LSRVQISTMAVKENL+VAGGF
Sbjct: 1   MQNYSVLHWSSLLRRSKEVLNVAKPVVPTLKLPGLMSQPLSRVQISTMAVKENLIVAGGF 60

Query: 61  QGELICKYLNHPEVAFCTKITANENAITNAVDIYRDSVSGIRIMTANNDCKIRIYDAECF 120
           QGELICKYLNHPEVAFCTKITAN+NAITNAVDIYRDS  G RIMTANND K+RIYDAE F
Sbjct: 61  QGELICKYLNHPEVAFCTKITANDNAITNAVDIYRDSTGGTRIMTANNDAKVRIYDAENF 120

Query: 121 SSLGCFSFDWSVNNTSVSPDGKMLAVLGDSPDCLITDANSGRAIGCLQGHLDYSFSSAWH 180
           SSLGCF FDWSVNNTSVSPDGK+LAVLGDSP CLITDANSGRAIGCLQGHLDYSF+SAWH
Sbjct: 121 SSLGCFPFDWSVNNTSVSPDGKLLAVLGDSPGCLITDANSGRAIGCLQGHLDYSFTSAWH 180

Query: 181 PNGHILATGNQDTTCRLWDVRKMSESMGVLKGRMGAIRALKFTSDGRFLAMAEPADFVHI 240
           PNGHILATGNQDTTCRLWDVRKMSESM VLKGRMGAIRA+KF+SDGRF+AMAEPADFVHI
Sbjct: 181 PNGHILATGNQDTTCRLWDVRKMSESMAVLKGRMGAIRAVKFSSDGRFVAMAEPADFVHI 240

Query: 241 FDTQSGYVEGQEIDMFGEIAGISFSPDAESLFVGVSDRTYGSLLEFNRRRENRYLDSII 299
           FD+QSGY+EGQEIDMFGEIAGI FSPDAESLFVGVSDRTYGSLLEFNRRR+N+YLDS+I
Sbjct: 241 FDSQSGYIEGQEIDMFGEIAGICFSPDAESLFVGVSDRTYGSLLEFNRRRDNKYLDSMI 299

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9Y7K56.7e-2936.18Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pomb... [more]
Q8YTC22.9e-1628.89Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7... [more]
Q8YRI12.1e-1428.72Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7... [more]
Q008084.7e-1431.02Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=2587412 GN=H... [more]
Q9BVA01.4e-1325.64Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens OX=9606 GN=KATNB1 ... [more]
Match NameE-valueIdentityDescription
XP_031740344.17.64e-218100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Cucumis sativus... [more]
XP_031740343.18.23e-218100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus... [more]
XP_004150943.11.17e-215100.00uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus... [more]
XP_038897976.11.59e-21095.65uncharacterized WD repeat-containing protein C2A9.03 isoform X3 [Benincasa hispi... [more]
XP_008444107.12.89e-20996.32PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Cucumis melo] >... [more]
Match NameE-valueIdentityDescription
A0A0A0KY983.99e-218100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G... [more]
A0A5A7VB291.40e-20996.32Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3B9K11.40e-20996.32uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=... [more]
A0A5D3D4W64.24e-20996.32Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1IIN51.25e-20392.31uncharacterized WD repeat-containing protein C2A9.03-like isoform X4 OS=Cucurbit... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 160..199
e-value: 1.7E-6
score: 37.6
coord: 203..242
e-value: 7.1
score: 11.6
coord: 61..116
e-value: 170.0
score: 2.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 164..199
e-value: 1.3E-4
score: 22.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 167..208
score: 13.516088
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 68..294
e-value: 2.2E-32
score: 114.3
NoneNo IPR availablePANTHERPTHR43991:SF12OS03G0386000 PROTEINcoord: 1..298
NoneNo IPR availablePANTHERPTHR43991WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATEDcoord: 1..298
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 167..201
score: 11.049229
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 186..200
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 44..279

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7826Cucsat.G7826gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T12.E1Cucsat.G7826.T12.E1exon
Cucsat.G7826.T12.E2Cucsat.G7826.T12.E2exon
Cucsat.G7826.T12.E3Cucsat.G7826.T12.E3exon
Cucsat.G7826.T12.E4Cucsat.G7826.T12.E4exon
Cucsat.G7826.T12.E5Cucsat.G7826.T12.E5exon
Cucsat.G7826.T12.E6Cucsat.G7826.T12.E6exon
Cucsat.G7826.T12.E7Cucsat.G7826.T12.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T12.C1Cucsat.G7826.T12.C1CDS
Cucsat.G7826.T12.C2Cucsat.G7826.T12.C2CDS
Cucsat.G7826.T12.C3Cucsat.G7826.T12.C3CDS
Cucsat.G7826.T12.C4Cucsat.G7826.T12.C4CDS
Cucsat.G7826.T12.C5Cucsat.G7826.T12.C5CDS
Cucsat.G7826.T12.C6Cucsat.G7826.T12.C6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7826.T12Cucsat.G7826.T12-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding