Cucsat.G7796 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G7796
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase
Location	ctg1556: 1268668 .. 1271839 (+)
RNA-Seq Expression	Cucsat.G7796
Synteny	Cucsat.G7796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATACCCACTAAAGAAGCGACGACGTTTTGAAGGATATACGCAATTCCATTTATTAATTAATTTTTATTATTCCTCTTCTTTCTATTCCCACTCTCACTGCAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCTTCTCTCCGATCACCTCTCCCCGCTCCCATCACTCTTCGCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGGTAACTTCTGTTTTGAGGAAAATTTTGTCGGGGTGGGGTTTTTGGTTTGAATTGGTTTCTCTTTTATGTCTAATTTTAGACTGTATTCGGTTTTCCGATGAGTTTACTTATTGGGTTCTTAGAATGATTGTTATGTGAAGATTTTCTGCTACTTTGTGGGGATTTTCATCGAATAGATTACGATCAGTTTAATTAACTATCGGATTATATGCATGTGTCTTCCCATATATTATTTTTTTTCATTTTCTTCATGGTGTTGGGAGGGGGGAAAGAAAACTACCCAAGTCGTTGGCATAGAGTTCTTTTGGATGTTGAGCTAACTTGATGAATTGAGTTCTACTAGTTTAATTTCGAAGGGATTCTATATTTTGACAGTCGGTTGAATTGAGTATTCTTTTCCATGTCAAATCATAAATTGATACTTTTAGAATGTAGGAGGAAAGTTTTGGTGTCTAATGCAACATTGTTACTGAATTCAGCCATTACTAATGAGGGTGAACTTAGTGACAAGTTTGATAGTTTTGTTATGGTTCTTGTAGAAAAAAAGACATGTTTATTTGAACTTTTTGCTTTTAAAGTGGTTACTATGTGCAGTATACTTAATTTATATTTGGAATGATGTTTTTTCGTCTCATGTAAAGAATGTAGCACGTATTATATATGGTAATGAATTTGATTATGTATGCTAAGAAACTATGTATCACCTAGGTACTTTGGGGTTTCCCCTTGGTAAAGGACTTGCTTAGGTATCTTTATTTCATTTATGGTAATAAATCTTGTTTCTCCATTTAAAAATTTATTGGATTAGGTTTTTGGTTTCCATGTCTCTGAAGGATTTTACACTTATTAGCAGGAATTTATTTCCAGTCAAGATATTTGCACGTTTACTTATTTTTCTTCTTGTGACAATACATGTAGATGTTTCATCAATCTTTGTATTTTCAGTCTTGTTCAACTCTCTTTTTACCCCCTCTGTTTTTTCCCTAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTAATACTCTCTCTTAGGGTCTTGAAACCCTTTTCTTTCTCTACCTAACCATGCCTGTGGTTTATCAGCAAATTAGTAGAATAATGATGTAATATGGAATATACCAGTTTGCTTGAAATGTATTCGCTCTCCATCACTAGCTATCGCAGCTTCTAAAATTCCATTAGATTTACTAGTTTCTCAAATTACTTTGTGAGAATAAATAATGCATCTTCATTTTGTGATCTCGATTCCGATATAACTTCCCGTAAATGTGTGAGTCTAAAATATGTTATTTTGTGATAAATGCGCTTTCCTTTTCACTAACTCCTGTTCATCACTGAAAGAAGCACTCAGGTCGTGTTTTCATATTATTTTCTAGTTACTTTGAGTTTCTGCTTCTGGACCTGTGGTTATATTTCCCTTGAGTTCTACATTGTTTCTTGGTGATAGCCTTTTTTGTTGTTGTTGTTGTTGTCGTTGTCGTTATCATTTCAATATCATTGTCATATTTGTATGAAAACTTCTCGTTTGTCTTGATGGAAGTCAAATATGAGGCTTCACTGATGGACTCATGATATCAAATGCAGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGTGAGCAACAATCTTATTTGTACTTTCATTCTCTTTTCATACCACCATGGATAAATGAAAATTTTTCTATCTCAGTTTGTTTCTAAATTCTAAAGAATTTCTACCACAAGAGTATTTATGAAACATTTATGAAAAGTTCAAGGGTAATATTACAACTTTTGAAAGTATAAGAATTTTTTAAAAATAAATGCCAAAGTTCAAGGATATTTGTTATAATTTAACCAATAATTTATCTGCACAGTTTCTACTTTTACCCCGTATCATCATACTCATAAAATAGACATCTTGTATTGTTACTTCGACAAAATTTTCCTATTTTTACATGTATACCATCAACAAAGGTATCCTGGTTACCTTTACAAGATATTTCTCCATGGAGTTTTCTTCTTTTAAAATGCTTTATCTGACACAAACTGAATCATGATTCCTTGTTTTAGAAGAATCTTTTTTTATCCTTCATAGTGCCTTTTATCATAGCATTGTAGGACTCTTTGCTATTTGATTAACTCTATGGTATTATATTTGCAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCAACTTTTGATCAAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACATAACCACACACAGGTCACGTATATCATCTCTTAACATATGTTGATTTGAGATTGAGACGGGTAGGGCAATGGGAGGGTAAAGCCTTGTTGAAAGGGAGGCCTTGCCTTTTCTTCTTTTTTTCTCTCTTTGAAAGAGGAAATAATTTCCTTAATGGCCAAATTGTAGATAGCTTCTTTCTTTCGTTTTGAGATTACTTAGGAGGCCAGATTAGTGGGGAATACTGTGAATAGAATTTGATGCACAGCTTACTAACTTATATATGCTACTAAGAAGACTACTTAGTTGATAGTAACAATTTCAGTAAATAAAGGCAAAGAAGCCATTTGCTTGCTCAATATTAAGCCCATATCATATTGTTCAGTGTTACTTCTATTAGTTATGCCTTTTTAGATATTGAAAGATGCTTTTTGAGTGTAGATTATGCAAATGGCAAGTCATATTT

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGA

Protein sequence

MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV

Homology

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BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.0e-31
Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 26  GAQDELRLSHNRIRLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNFLEG 85
           G Q+  + S     L++VFL FDVFF++FC  +A V   AVCC +P  +A  Y +   EG
Sbjct: 238 GGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEG 297

Query: 86  ASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTLEPGYNGHTTEHTLNAEDSACCIC 145
           AS+++I  L K++F +        ND+ Q    G+  E G +    EHTL  ED+ CCIC
Sbjct: 298 ASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS-PIEHTLLQEDAECCIC 357

Query: 146 LAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSL 190
           L+ Y  G +L  LPC HHFH  C+ KWL INATCPLCK++I +  +L
Sbjct: 358 LSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 403

[Close]

BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 40  LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNFLEGASEDEIRALPKYRF 99
           L ++FL FDVFF++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  +PK+RF
Sbjct: 242 LCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRF 301

Query: 100 HQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCN 159
            +   +E      +   G+  E G +    E +L+ ED+ CCICL +Y  GV+L  LPCN
Sbjct: 302 TKTGNVEKLSGKAR---GIMTECGTDS-PIERSLSPEDAECCICLCEYEDGVELRELPCN 361

Query: 160 HHFHTRCIVKWLRINATCPLCKFSI 184
           HHFH  CI KWL IN+ CPLCKF+I
Sbjct: 362 HHFHCTCIDKWLHINSRCPLCKFNI 382

[Close]

BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.5e-29
Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 40  LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNFLEGASEDEIRALPKYRF 99
           L+V+FLA DVFF +FC  +A +   A+CC +P  +A  Y +   EG SE E+  LP Y+F
Sbjct: 209 LSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKF 268

Query: 100 HQDNPLESFDNDKKQEVGMTLEPG------YNG--HTTEHTLNAEDSACCICLAQYVHGV 159
                 ++F +++K   G    PG       NG    TE TL AED+ CCICL+ Y  G 
Sbjct: 269 ------KAFHSNEKNITG----PGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGA 328

Query: 160 QLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQG 187
           +L  LPCNHHFH+ CIVKWL++ ATCPLCK++I +G
Sbjct: 329 ELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKG 354

[Close]

BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27
Identity = 70/163 (42.94%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 26  GAQDELRLSHNRIRLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNFLEG 85
           G Q+  + S     L +VFL FDVFF++FC  +A V   AVCC +P  +A  Y +   EG
Sbjct: 208 GGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEG 267

Query: 86  ASEDEIRALPKYRFHQ--DNPLESFDNDKKQ--EVGMTLEPGYNGHTTEHTLNAEDSACC 145
           AS+++I  L K++F +  D    + D ++ Q    G+  E G +    EH L  ED+ CC
Sbjct: 268 ASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS-PVEHALPHEDAECC 327

Query: 146 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 184
           ICL+ Y    +L  LPC HHFH  C+ KWL INATCPLCK++I
Sbjct: 328 ICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot
Match: Q7T037 (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-11
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 84  GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 143
           G + +E  +LP     Q   L   D+D  Q  G+T E   N  T  +  N     C +C+
Sbjct: 650 GVTLEESGSLPFLSLAQFFLLNEDDDD--QPRGLTKEQIDNLSTRNYGENDALKTCSVCI 709

Query: 144 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI---GQGDSLV 191
            +Y  G +L  LPC+H +H  CI +WL  N+TCP+C+ ++   G  +S+V
Sbjct: 710 TEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGNRESIV 757

[Close]

BLAST of Cucsat.G7796 vs. NCBI nr
Match: XP_004144310.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_012005 [Cucumis sativus])

HSP 1 Score: 377 bits (968), Expect = 2.09e-129
Identity = 190/230 (82.61%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR                     
Sbjct: 118 LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN
Sbjct: 178 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. NCBI nr
Match: XP_038881255.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 362 bits (930), Expect = 1.26e-123
Identity = 181/230 (78.70%), Postives = 186/230 (80.87%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVFVAYLRRS+RYR GFENRGAQDE RLSH+RIR                     
Sbjct: 118 LFHVFFVFVAYLRRSNRYRFGFENRGAQDEFRLSHHRIRVMKRLEALNTMIAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFFAVCCI+PFLAYGYTM 
Sbjct: 178 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIVPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRFHQDNPLESFD+DKKQEVGMTLEPGY+GHTTEHTLN EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLESFDSDKKQEVGMTLEPGYSGHTTEHTLNPEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 346 bits (888), Expect = 3.04e-117
Identity = 172/230 (74.78%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR                     
Sbjct: 118 LFHVFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAV+FLAFDVFFIIFCTGMAFVG FAVCCIIPFLAYGYTM 
Sbjct: 178 YLIVMGGQALVEGSPRLYWLAVIFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRFHQDNPLE FD+DK QE+GMTLEPG+N HTTEHTL+ EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLEPFDSDKNQEIGMTLEPGFNDHTTEHTLHPEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC HHFHTRCIVKWLRINATCPLCKF+IGQGD+LV
Sbjct: 298 ICLAQYVHGVQLCMLPCTHHFHTRCIVKWLRINATCPLCKFTIGQGDTLV 347

[Close]

BLAST of Cucsat.G7796 vs. NCBI nr
Match: XP_023543467.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (877), Expect = 1.43e-115
Identity = 174/230 (75.65%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           L HVFFVF AY RRSSRYR  FENR AQDELRLSHNRIR                     
Sbjct: 118 LLHVFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFF VCCIIPFLAYGYTM 
Sbjct: 178 YWIVTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFSIG GDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSIGHGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. NCBI nr
Match: XP_022949865.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >KAG6603427.1 E3 ubiquitin protein ligase RIE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342 bits (876), Expect = 2.03e-115
Identity = 173/230 (75.22%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           L HVFFVF AY RRSSRYR  FENR AQDELRLSHNRIR                     
Sbjct: 118 LLHVFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFF VCCIIPFLAYGYTM 
Sbjct: 178 YWIVTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL
Match: A0A0A0KYD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 377 bits (968), Expect = 1.01e-129
Identity = 190/230 (82.61%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR                     
Sbjct: 118 LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN
Sbjct: 178 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL
Match: A0A6J1DJQ2 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111021746 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 1.47e-117
Identity = 172/230 (74.78%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR                     
Sbjct: 118 LFHVFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAV+FLAFDVFFIIFCTGMAFVG FAVCCIIPFLAYGYTM 
Sbjct: 178 YLIVMGGQALVEGSPRLYWLAVIFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRFHQDNPLE FD+DK QE+GMTLEPG+N HTTEHTL+ EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLEPFDSDKNQEIGMTLEPGFNDHTTEHTLHPEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC HHFHTRCIVKWLRINATCPLCKF+IGQGD+LV
Sbjct: 298 ICLAQYVHGVQLCMLPCTHHFHTRCIVKWLRINATCPLCKFTIGQGDTLV 347

[Close]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL
Match: A0A6J1GE01 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111453131 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 9.81e-116
Identity = 173/230 (75.22%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           L HVFFVF AY RRSSRYR  FENR AQDELRLSHNRIR                     
Sbjct: 118 LLHVFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFF VCCIIPFLAYGYTM 
Sbjct: 178 YWIVTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL
Match: A0A6J1HW81 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111467225 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 1.39e-115
Identity = 173/230 (75.22%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           L HVFFVF AY RRSSRYR  FENR AQDELRLSHNRIR                     
Sbjct: 118 LLHVFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVGFF VCCIIPFLAYGYTM 
Sbjct: 178 YWIVMGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMT 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 180
           FLEGASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNPEDSACC 297

Query: 181 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 190
           ICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 298 ICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL
Match: A0A5A7SMU7 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00840 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 3.10e-98
Identity = 155/196 (79.08%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR--------------------- 60
           LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR                     
Sbjct: 118 LFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 177

Query: 61  -------------------LAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMN 120
                              LAVVFLAFDVFFIIFCTGMAFVG FAVCCIIPFLAYGYTMN
Sbjct: 178 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMN 237

Query: 121 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 156
           FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC
Sbjct: 238 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 297

The following BLAST results are available for this feature:

BLAST of Cucsat.G7796 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN71	6.0e-31	43.71	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q93Z92	1.1e-29	46.21	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q8GUU2	9.5e-29	46.15	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]
Q8LDB8	1.8e-27	42.94	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q7T037	9.0e-11	33.64	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV...	[more]

BLAST of Cucsat.G7796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144310.1	2.09e-129	82.61	E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical...	[more]
XP_038881255.1	1.26e-123	78.70	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]
XP_022154475.1	3.04e-117	74.78	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]
XP_023543467.1	1.43e-115	75.65	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949865.1	2.03e-115	75.22	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >KAG6603427.1 E3...	[more]

BLAST of Cucsat.G7796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD1	1.01e-129	82.61	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 P...	[more]
A0A6J1DJQ2	1.47e-117	74.78	E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1GE01	9.81e-116	75.22	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HW81	1.39e-115	75.22	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7SMU7	3.10e-98	79.08	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 296..336 e-value: 2.4E-5 score: 33.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 295..337 e-value: 1.3E-10 score: 41.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 296..337 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 277..344 e-value: 3.3E-17 score: 63.5
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 12..347
None	No IPR available	PANTHER	PTHR45977:SF19	RING-FINGER UBIQUITIN LIGASE	coord: 12..347
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 282..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G7796.T1	Cucsat.G7796.T1	mRNA
Cucsat.G7796.T2	Cucsat.G7796.T2	mRNA
Cucsat.G7796.T3	Cucsat.G7796.T3	mRNA
Cucsat.G7796.T5	Cucsat.G7796.T5	mRNA
Cucsat.G7796.T4	Cucsat.G7796.T4	mRNA
Cucsat.G7796.T7	Cucsat.G7796.T7	mRNA
Cucsat.G7796.T8	Cucsat.G7796.T8	mRNA
Cucsat.G7796.T6	Cucsat.G7796.T6	mRNA
Cucsat.G7796.T9	Cucsat.G7796.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane