Cucsat.G7796.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G7796.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase
Location	ctg1556: 1268156 .. 1271896 (+)
RNA-Seq Expression	Cucsat.G7796.T3
Synteny	Cucsat.G7796.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAGGATATACGCAATTCCATTTATTAATTAATTTTTATTATTCCTCTTCTTTCTATTCCCACTCTCACTGCAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCTTCTCTCCGATCACCTCTCCCCGCTCCCATCACTCTTCGCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGGTAACTTCTGTTTTGAGGAAAATTTTGTCGGGGTGGGGTTTTTGGTTTGAATTGGTTTCTCTTTTATGTCTAATTTTAGACTGTATTCGGTTTTCCGATGAGTTTACTTATTGGGTTCTTAGAATGATTGTTATGTGAAGATTTTCTGCTACTTTGTGGGGATTTTCATCGAATAGATTACGATCAGTTTAATTAACTATCGGATTATATGCATGTGTCTTCCCATATATTATTTTTTTTCATTTTCTTCATGGTGTTGGGAGGGGGGAAAGAAAACTACCCAAGTCGTTGGCATAGAGTTCTTTTGGATGTTGAGCTAACTTGATGAATTGAGTTCTACTAGTTTAATTTCGAAGGGATTCTATATTTTGACAGTCGGTTGAATTGAGTATTCTTTTCCATGTCAAATCATAAATTGATACTTTTAGAATGTAGGAGGAAAGTTTTGGTGTCTAATGCAACATTGTTACTGAATTCAGCCATTACTAATGAGGGTGAACTTAGTGACAAGTTTGATAGTTTTGTTATGGTTCTTGTAGAAAAAAAGACATGTTTATTTGAACTTTTTGCTTTTAAAGTGGTTACTATGTGCAGTATACTTAATTTATATTTGGAATGATGTTTTTTCGTCTCATGTAAAGAATGTAGCACGTATTATATATGGTAATGAATTTGATTATGTATGCTAAGAAACTATGTATCACCTAGGTACTTTGGGGTTTCCCCTTGGTAAAGGACTTGCTTAGGTATCTTTATTTCATTTATGGTAATAAATCTTGTTTCTCCATTTAAAAATTTATTGGATTAGGTTTTTGGTTTCCATGTCTCTGAAGGATTTTACACTTATTAGCAGGAATTTATTTCCAGTCAAGATATTTGCACGTTTACTTATTTTTCTTCTTGTGACAATACATGTAGATGTTTCATCAATCTTTGTATTTTCAGTCTTGTTCAACTCTCTTTTTACCCCCTCTGTTTTTTCCCTAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTAATACTCTCTCTTAGGGTCTTGAAACCCTTTTCTTTCTCTACCTAACCATGCCTGTGGTTTATCAGCAAATTAGTAGAATAATGATGTAATATGGAATATACCAGTTTGCTTGAAATGTATTCGCTCTCCATCACTAGCTATCGCAGCTTCTAAAATTCCATTAGATTTACTAGTTTCTCAAATTACTTTGTGAGAATAAATAATGCATCTTCATTTTGTGATCTCGATTCCGATATAACTTCCCGTAAATGTGTGAGTCTAAAATATGTTATTTTGTGATAAATGCGCTTTCCTTTTCACTAACTCCTGTTCATCACTGAAAGAAGCACTCAGGTCGTGTTTTCATATTATTTTCTAGTTACTTTGAGTTTCTGCTTCTGGACCTGTGGTTATATTTCCCTTGAGTTCTACATTGTTTCTTGGTGATAGCCTTTTTTGTTGTTGTTGTTGTTGTCGTTGTCGTTATCATTTCAATATCATTGTCATATTTGTATGAAAACTTCTCGTTTGTCTTGATGGAAGTCAAATATGAGGCTTCACTGATGGACTCATGATATCAAATGCAGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGTGAGCAACAATCTTATTTGTACTTTCATTCTCTTTTCATACCACCATGGATAAATGAAAATTTTTCTATCTCAGTTTGTTTCTAAATTCTAAAGAATTTCTACCACAAGAGTATTTATGAAACATTTATGAAAAGTTCAAGGGTAATATTACAACTTTTGAAAGTATAAGAATTTTTTAAAAATAAATGCCAAAGTTCAAGGATATTTGTTATAATTTAACCAATAATTTATCTGCACAGTTTCTACTTTTACCCCGTATCATCATACTCATAAAATAGACATCTTGTATTGTTACTTCGACAAAATTTTCCTATTTTTACATGTATACCATCAACAAAGGTATCCTGGTTACCTTTACAAGATATTTCTCCATGGAGTTTTCTTCTTTTAAAATGCTTTATCTGACACAAACTGAATCATGATTCCTTGTTTTAGAAGAATCTTTTTTTATCCTTCATAGTGCCTTTTATCATAGCATTGTAGGACTCTTTGCTATTTGATTAACTCTATGGTATTATATTTGCAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCAACTTTTGATCAAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACATAACCACACACAGGTCACGTATATCATCTCTTAACATATGTTGATTTGAGATTGAGACGGGTAGGGCAATGGGAGGGTAAAGCCTTGTTGAAAGGGAGGCCTTGCCTTTTCTTCTTTTTTTCTCTCTTTGAAAGAGGAAATAATTTCCTTAATGGCCAAATTGTAGATAGCTTCTTTCTTTCGTTTTGAGATTACTTAGGAGGCCAGATTAGTGGGGAATACTGTGAATAGAATTTGATGCACAGCTTACTAACTTATATATGCTACTAAGAAGACTACTTAGTTGATAGTAACAATTTCAGTAAATAAAGGCAAAGAAGCCATTTGCTTGCTCAATATTAAGCCCATATCATATTGTTCAGTGTTACTTCTATTAGTTATGCCTTTTTAGAT

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGGTAA

Protein sequence

MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR

Homology

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 143

Query: 136 RYRLGFENRGA 145
           R R     R +
Sbjct: 145 RRRRDLSPRSS 143

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++VLD+ WNL FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y 
Sbjct: 95  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154

Query: 130 RRSSR 135
           RR+ R
Sbjct: 155 RRNRR 159

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSR 135
           RR  R
Sbjct: 164 RRRRR 168

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S ++LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSRYR 137
           R+S  R
Sbjct: 133 RNSTRR 138

[Close]

BLAST of Cucsat.G7796.T3 vs. NCBI nr
Match: XP_004144310.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_012005 [Cucumis sativus])

HSP 1 Score: 311 bits (796), Expect = 7.20e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. NCBI nr
Match: XP_008455807.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo])

HSP 1 Score: 304 bits (778), Expect = 2.42e-103
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. NCBI nr
Match: KAA0025775.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK09679.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 304 bits (778), Expect = 3.01e-101
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. NCBI nr
Match: XP_038881255.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 292 bits (748), Expect = 1.39e-96
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDD RPS++ FLSWQRT+SSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDGRPSSTSFLSWQRTISSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRS+RYR GFENRGAQDE RLSH+RIR
Sbjct: 121 VFFVFVAYLRRSNRYRFGFENRGAQDEFRLSHHRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 281 bits (718), Expect = 4.94e-92
Identity = 136/156 (87.18%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD+ RPS++GF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD++D+ EY+
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL
Match: A0A0A0KYD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 3.49e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL
Match: A0A1S3C1Q6 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC103495904 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.17e-103
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL
Match: A0A5A7SMU7 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00840 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.46e-101
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL
Match: A0A6J1DJQ2 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111021746 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 2.39e-92
Identity = 136/156 (87.18%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD+ RPS++GF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD++D+ EY+
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIR 156

[Close]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL
Match: A0A6J1GE01 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111453131 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 2.40e-87
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD  RPS++GFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDD+ED+N Y+
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIR 156

The following BLAST results are available for this feature:

BLAST of Cucsat.G7796.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDB8	1.0e-12	33.59	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q9LN71	3.3e-11	49.23	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q93Z92	4.3e-11	49.23	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q8GUU2	6.9e-09	42.42	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]

BLAST of Cucsat.G7796.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144310.1	7.20e-104	100.00	E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical...	[more]
XP_008455807.1	2.42e-103	97.44	PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo]	[more]
KAA0025775.1	3.01e-101	97.44	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK09679.1 E3 ubiquitin-...	[more]
XP_038881255.1	1.39e-96	92.95	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]
XP_022154475.1	4.94e-92	87.18	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]

BLAST of Cucsat.G7796.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD1	3.49e-104	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 P...	[more]
A0A1S3C1Q6	1.17e-103	97.44	E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC1034959...	[more]
A0A5A7SMU7	1.46e-101	97.44	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1DJQ2	2.39e-92	87.18	E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1GE01	2.40e-87	85.90	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 11..145
None	No IPR available	PANTHER	PTHR45977:SF19	RING-FINGER UBIQUITIN LIGASE	coord: 11..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G7796	Cucsat.G7796	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T3.E1	Cucsat.G7796.T3.E1	exon
Cucsat.G7796.T3.E2	Cucsat.G7796.T3.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T3.C1	Cucsat.G7796.T3.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T3	Cucsat.G7796.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane