Cucsat.G7796.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G7796.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase
Location	ctg1556: 1268175 .. 1271848 (+)
RNA-Seq Expression	Cucsat.G7796.T5
Synteny	Cucsat.G7796.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTTATTAATTAATTTTTATTATTCCTCTTCTTTCTATTCCCACTCTCACTGCAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCTTCTCTCCGATCACCTCTCCCCGCTCCCATCACTCTTCGCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGGTAACTTCTGTTTTGAGGAAAATTTTGTCGGGGTGGGGTTTTTGGTTTGAATTGGTTTCTCTTTTATGTCTAATTTTAGACTGTATTCGGTTTTCCGATGAGTTTACTTATTGGGTTCTTAGAATGATTGTTATGTGAAGATTTTCTGCTACTTTGTGGGGATTTTCATCGAATAGATTACGATCAGTTTAATTAACTATCGGATTATATGCATGTGTCTTCCCATATATTATTTTTTTTCATTTTCTTCATGGTGTTGGGAGGGGGGAAAGAAAACTACCCAAGTCGTTGGCATAGAGTTCTTTTGGATGTTGAGCTAACTTGATGAATTGAGTTCTACTAGTTTAATTTCGAAGGGATTCTATATTTTGACAGTCGGTTGAATTGAGTATTCTTTTCCATGTCAAATCATAAATTGATACTTTTAGAATGTAGGAGGAAAGTTTTGGTGTCTAATGCAACATTGTTACTGAATTCAGCCATTACTAATGAGGGTGAACTTAGTGACAAGTTTGATAGTTTTGTTATGGTTCTTGTAGAAAAAAAGACATGTTTATTTGAACTTTTTGCTTTTAAAGTGGTTACTATGTGCAGTATACTTAATTTATATTTGGAATGATGTTTTTTCGTCTCATGTAAAGAATGTAGCACGTATTATATATGGTAATGAATTTGATTATGTATGCTAAGAAACTATGTATCACCTAGGTACTTTGGGGTTTCCCCTTGGTAAAGGACTTGCTTAGGTATCTTTATTTCATTTATGGTAATAAATCTTGTTTCTCCATTTAAAAATTTATTGGATTAGGTTTTTGGTTTCCATGTCTCTGAAGGATTTTACACTTATTAGCAGGAATTTATTTCCAGTCAAGATATTTGCACGTTTACTTATTTTTCTTCTTGTGACAATACATGTAGATGTTTCATCAATCTTTGTATTTTCAGTCTTGTTCAACTCTCTTTTTACCCCCTCTGTTTTTTCCCTAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTAATACTCTCTCTTAGGGTCTTGAAACCCTTTTCTTTCTCTACCTAACCATGCCTGTGGTTTATCAGCAAATTAGTAGAATAATGATGTAATATGGAATATACCAGTTTGCTTGAAATGTATTCGCTCTCCATCACTAGCTATCGCAGCTTCTAAAATTCCATTAGATTTACTAGTTTCTCAAATTACTTTGTGAGAATAAATAATGCATCTTCATTTTGTGATCTCGATTCCGATATAACTTCCCGTAAATGTGTGAGTCTAAAATATGTTATTTTGTGATAAATGCGCTTTCCTTTTCACTAACTCCTGTTCATCACTGAAAGAAGCACTCAGGTCGTGTTTTCATATTATTTTCTAGTTACTTTGAGTTTCTGCTTCTGGACCTGTGGTTATATTTCCCTTGAGTTCTACATTGTTTCTTGGTGATAGCCTTTTTTGTTGTTGTTGTTGTTGTCGTTGTCGTTATCATTTCAATATCATTGTCATATTTGTATGAAAACTTCTCGTTTGTCTTGATGGAAGTCAAATATGAGGCTTCACTGATGGACTCATGATATCAAATGCAGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGTGAGCAACAATCTTATTTGTACTTTCATTCTCTTTTCATACCACCATGGATAAATGAAAATTTTTCTATCTCAGTTTGTTTCTAAATTCTAAAGAATTTCTACCACAAGAGTATTTATGAAACATTTATGAAAAGTTCAAGGGTAATATTACAACTTTTGAAAGTATAAGAATTTTTTAAAAATAAATGCCAAAGTTCAAGGATATTTGTTATAATTTAACCAATAATTTATCTGCACAGTTTCTACTTTTACCCCGTATCATCATACTCATAAAATAGACATCTTGTATTGTTACTTCGACAAAATTTTCCTATTTTTACATGTATACCATCAACAAAGGTATCCTGGTTACCTTTACAAGATATTTCTCCATGGAGTTTTCTTCTTTTAAAATGCTTTATCTGACACAAACTGAATCATGATTCCTTGTTTTAGAAGAATCTTTTTTTATCCTTCATAGTGCCTTTTATCATAGCATTGTAGGACTCTTTGCTATTTGATTAACTCTATGGTATTATATTTGCAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCAACTTTTGATCAAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACATAACCACACACAGGTCACGTATATCATCTCTTAACATATGTTGATTTGAGATTGAGACGGGTAGGGCAATGGGAGGGTAAAGCCTTGTTGAAAGGGAGGCCTTGCCTTTTCTTCTTTTTTTCTCTCTTTGAAAGAGGAAATAATTTCCTTAATGGCCAAATTGTAGATAGCTTCTTTCTTTCGTTTTGAGATTACTTAGGAGGCCAGATTAGTGGGGAATACTGTGAATAGAATTTGATGCACAGCTTACTAACTTATATATGCTACTAAGAAGACTACTTAGTTGATAGTAACAATTTCAGTAAATAAAGGCAAAGAAGCCATTTGCTTGCTCAATATTAAGCC

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTGGCAGTTGTTTTCCTAG

Protein sequence

MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGWQLFS

Homology

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-22
Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 0


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRLGFENRGA------------QDELRLSHN--------------RIRVMKRLEALNTM 191
           R R     R +            ++ L LS N                   K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSRYR------LGFENRGAQDELRLSHNRIR-----VMKRLEALNTMVAYIWWVFGFY 188
           RR  R         G  N  +Q  + L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++VLD+ WNL FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y 
Sbjct: 95  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154

Query: 130 RRSSR---------------------------YRLGFENRGAQDELRLSH---NRIRVMK 189
           RR+ R                             LG        +L L H       V K
Sbjct: 155 RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 214

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S ++LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSR-------------YRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 189
           R+S              Y + ++     D+   +++    +KR E++NT++++IWW+ GF
Sbjct: 133 RNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS---FVKRCESINTVISFIWWIIGF 192

[Close]

BLAST of Cucsat.G7796.T5 vs. NCBI nr
Match: XP_004144310.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_012005 [Cucumis sativus])

HSP 1 Score: 381 bits (979), Expect = 5.45e-131
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. NCBI nr
Match: XP_008455807.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo])

HSP 1 Score: 374 bits (961), Expect = 1.50e-130
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. NCBI nr
Match: KAA0025775.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK09679.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 374 bits (961), Expect = 2.27e-128
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. NCBI nr
Match: XP_038881255.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 362 bits (930), Expect = 1.54e-123
Identity = 178/190 (93.68%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDD RPS++ FLSWQRT+SSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDGRPSSTSFLSWQRTISSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRS+RYR GFENRGAQDE RLSH+RIRVMKRLEALNTM+AYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSNRYRFGFENRGAQDEFRLSHHRIRVMKRLEALNTMIAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 343 bits (881), Expect = 4.31e-116
Identity = 167/190 (87.89%), Postives = 183/190 (96.32%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD+ RPS++GF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD++D+ EY+
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR MKRLEALNTMVAYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEG 190
           VMGGQAL+EG
Sbjct: 181 VMGGQALVEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL
Match: A0A0A0KYD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 381 bits (979), Expect = 2.64e-131
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL
Match: A0A1S3C1Q6 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC103495904 PE=4 SV=1)

HSP 1 Score: 374 bits (961), Expect = 7.28e-131
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL
Match: A0A5A7SMU7 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00840 PE=4 SV=1)

HSP 1 Score: 374 bits (961), Expect = 1.10e-128
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQALLEG
Sbjct: 181 VMGGQALLEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL
Match: A0A6J1DJQ2 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111021746 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 2.09e-116
Identity = 167/190 (87.89%), Postives = 183/190 (96.32%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD+ RPS++GF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD++D+ EY+
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR MKRLEALNTMVAYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEG 190
           VMGGQAL+EG
Sbjct: 181 VMGGQALVEG 190

[Close]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL
Match: A0A6J1HW81 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111467225 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 2.49e-110
Identity = 161/190 (84.74%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MD  RP ++GFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDD+ED+N Y+
Sbjct: 1   MDGGRPLSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR +KRLEA NTM++YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEG 190
           VMGGQ+LLEG
Sbjct: 181 VMGGQSLLEG 190

The following BLAST results are available for this feature:

BLAST of Cucsat.G7796.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDB8	4.0e-22	33.00	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q93Z92	1.3e-20	41.86	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q9LN71	1.4e-19	36.67	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q8GUU2	1.2e-18	35.11	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]

BLAST of Cucsat.G7796.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144310.1	5.45e-131	100.00	E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical...	[more]
XP_008455807.1	1.50e-130	97.89	PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo]	[more]
KAA0025775.1	2.27e-128	97.89	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK09679.1 E3 ubiquitin-...	[more]
XP_038881255.1	1.54e-123	93.68	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]
XP_022154475.1	4.31e-116	87.89	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]

BLAST of Cucsat.G7796.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD1	2.64e-131	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 P...	[more]
A0A1S3C1Q6	7.28e-131	97.89	E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC1034959...	[more]
A0A5A7SMU7	1.10e-128	97.89	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1DJQ2	2.09e-116	87.89	E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1HW81	2.49e-110	84.74	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45977:SF19	RING-FINGER UBIQUITIN LIGASE	coord: 12..189
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 12..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G7796	Cucsat.G7796	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T5.E1	Cucsat.G7796.T5.E1	exon
Cucsat.G7796.T5.E2	Cucsat.G7796.T5.E2	exon
Cucsat.G7796.T5.E3	Cucsat.G7796.T5.E3	exon
Cucsat.G7796.T5.E4	Cucsat.G7796.T5.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T5.C1	Cucsat.G7796.T5.C1	CDS
Cucsat.G7796.T5.C2	Cucsat.G7796.T5.C2	CDS
Cucsat.G7796.T5.C3	Cucsat.G7796.T5.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7796.T5	Cucsat.G7796.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane