Cucsat.G7721 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7721
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L30-like
Locationctg1546: 578148 .. 579494 (+)
RNA-Seq ExpressionCucsat.G7721
SyntenyCucsat.G7721
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATAATTTAAGAAGCCCATTAATATTTTCAGCTAGGCCCAGAAAAAGCCCGTTGAATTGAATAAAAACTGTTATAAAAATTGGAAACCCTAATTCTATCCCCGCCACCCCTTGTCGTGAAAAAAGCTAGAAGGTATGGATTGAAACCCTAATTTGAAACCCATAAAATTTGAAGTACTTCCATATTTCATCTTTTCTTTATCAGTTTCATCTTTCTTTAGGTATTCCTACACCTTTTGAGTAGCGACGATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGTTTTCATCCGTTTCTTCTTTCAATTTAAGGTTTTATCCTGTATTTGTTTTTTTTTACACAGTTAAATATTTCGATCTGTGAAAATACAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTCTTTTTAAATAGTCTACTTCTACTTGGTAGATGGTTGTTTATTTTTTCCAAGTTGCAAGCTTTATAACATTTTGGAGCCTCATATGCATGATTTCTGGTTTATGGGACTTGGCTGCTCCTTTTTCTTTATAATGTTAGCACATCTTTCATAATTGTAGAATAAGAAAAACAACTCTTATACTTGACACAAATTAGAGTTAGCATCTTGGATAATCTGGGCAAGTATTTACTCTGTTTCTAATTGTATATTTGAGTAACTTGATAAATTAGGTAATGGCTGGGTATTCTGCTACGAATAGTGCTCATAATGGAGCTTTCTGTGTTCAAATAAACTAATAATTCAGTGTGTAGTTTGTTCAATTGTTCACACTATAATCTTTGTAGAACTATTTGCGAGGTAGGAGCTATTTGCATACCTGTGAAGGAAGGCACAAATAGACACAGGAATGTTAAAATTTAGGGCTCTAACACAGGAAAAACATTTTTATCAAGTGTCAGAGTGTCCAGATAAGAAGGAGGTTATGGCTAAAAAAATATGCTTAGTTTTGTACTTTCCTACTGATTTGCTACCATTATCTTTCAACAGTTGTTTTGATCTTGGTATGAAGCCTATTGAATTAAACAAGTGGGTTTCTATCATTGGTAGTAATTGGCTTGCTTCTTGCTCATAATATTTATGTTGGTCAATCAATTTAATTTGAACTCGTTCCATTTATACGTGTTTAGTTTAAATCTTACTCAGTTAATTAGACATGTATTGTCAATTGTTCTGCTTTACTTCTATGTATTTTCAGGCACTGTTATTATTTGTATGTTTTATTTATTATTTTTGTTATTTATGTATGCTTAGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTACTACAAACTTTTTTATTCGGTTTATTAAATTCCATTTCTATTTCATTACAGTGGTTCTTATATTTCAGTTCTTGAAGTTTGCATAAATAATTGAAACAGAAATTAATATATGGCCATTTGATTTTCCTTTACTTTGTGAATTAATTTCATACTGAGAGCATATATTTTCTGTGGTATTTTAGAGAACACATGTAGTTGAGTGTTGGGTTTTAAAATGCAACACCTTAAAAATTGGCACCAAAATGATAAACCTGTTTAAGTTTAAATCAAAAATAGAAAATAGTGAAACATTTAGGTGCCTTGTACTTGACTTTTATTGATTGGTTTTACCAAGATTCCTCCTTTTCTTTCTTTTCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGATTTTTGTGTCATTGAGAACGTTAGTTTATTTTTTTTCTTTTGCACCTTTTCTTTTCAGCAAAGGTAAAAGTTGCACTGATTTTAAAGTCCCCAGAGTAGCTACCAACTTTAAGCATTAAAATTGTATTGTTGATAACCAGATTTTGTCAATGTCTTTGAGGTTTTATGTAGAATGCTCAAGTAGTTTTATACCTATTTATGCATAAACAATTGAGAATCCAAAATCTTCTTTTGCCTTCCAATTACAAGATTGTTTTAGTTCGAAAATGAGTAGGAATTCATCATTTGATCTGAATGCCTCGTATTAGGCTTAAAATTATACCCGTGTTAAATGCTTATTTGC

Coding sequence (CDS)

ATGGCGCCGGCGAAGAAGACCAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA

Protein sequence

MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Homology
[Close]
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-33
Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKKTHESINNRLALVMKSGKYTLGYKTVL+++R SKGKLII++NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.3e-32
Identity = 65/83 (78.31%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKKTHESIN+RLALVMKSGK+TLGYKTVL ++R +KGKLII++NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-30
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-29
Identity = 60/75 (80.00%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYN 76
          EYYAMLAK+GVHHYN
Sbjct: 61 EYYAMLAKVGVHHYN 75

[Close]
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M   KK KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1  MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVH YNG+   L +
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGT 83

[Close]
BLAST of Cucsat.G7721 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus])

HSP 1 Score: 155 bits (391), Expect = 1.46e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (385), Expect = 1.20e-45
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (384), Expect = 1.71e-45
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAK+GVHHYNGS
Sbjct: 61 EYYAMLAKVGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. NCBI nr
Match: XP_022990953.1 (60S ribosomal protein L30-like [Cucurbita maxima])

HSP 1 Score: 151 bits (382), Expect = 3.44e-45
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTV+RTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVIRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAK+GVHHYNGS
Sbjct: 61 EYYAMLAKVGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. NCBI nr
Match: KAG6602049.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152 bits (384), Expect = 4.75e-45
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 34  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 93

Query: 61  EYYAMLAKIGVHHYNGS 77
           EYYAMLAK+GVHHYNGS
Sbjct: 94  EYYAMLAKVGVHHYNGS 110

[Close]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 7.08e-47
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

The following BLAST results are available for this feature:
BLAST of Cucsat.G7721 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498842.0e-3381.9360S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
Q9M5M68.3e-3278.3160S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
Q8VZ191.2e-3074.7060S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
Q9C8F71.0e-2980.00Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
Q9LSA31.5e-2871.0860S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1[more]
BLAST of Cucsat.G7721 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140311.11.46e-46100.0060S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa... [more]
XP_008460497.11.20e-4598.70PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib... [more]
XP_022952815.11.71e-4597.4060S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma... [more]
XP_022990953.13.44e-4596.1060S ribosomal protein L30-like [Cucurbita maxima][more]
KAG6602049.14.75e-4597.4060S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cucsat.G7721 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ987.08e-47100.00Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409... [more]
A0A5D3DSZ75.82e-4698.7060S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JWW85.82e-4698.7060S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ... [more]
A0A6J1FH915.82e-4698.7060S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=... [more]
A0A1S3CCQ45.82e-4698.7060S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 1.4E-22
score: 79.2
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..107
e-value: 2.4E-52
score: 177.0
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..106
NoneNo IPR availablePANTHERPTHR11449:SF2360S RIBOSOMAL PROTEIN L30coord: 1..112
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..112
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100
IPR000231Ribosomal protein L30eHAMAPMF_00481Ribosomal_L30ecoord: 12..109
score: 21.139532

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7721.T2Cucsat.G7721.T2mRNA
Cucsat.G7721.T6Cucsat.G7721.T6mRNA
Cucsat.G7721.T5Cucsat.G7721.T5mRNA
Cucsat.G7721.T1Cucsat.G7721.T1mRNA
Cucsat.G7721.T8Cucsat.G7721.T8mRNA
Cucsat.G7721.T7Cucsat.G7721.T7mRNA
Cucsat.G7721.T3Cucsat.G7721.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome