Cucsat.G7721.T7 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7721.T7
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L30-like
Locationctg1546: 578159 .. 580007 (+)
RNA-Seq ExpressionCucsat.G7721.T7
SyntenyCucsat.G7721.T7
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAAAAAGCTAGAAGGTATGGATTGAAACCCTAATTTGAAACCCATAAAATTTGAAGTACTTCCATATTTCATCTTTTCTTTATCAGTTTCATCTTTCTTTAGGTATTCCTACACCTTTTGAGTAGCGACGATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGTTTTCATCCGTTTCTTCTTTCAATTTAAGGTTTTATCCTGTATTTGTTTTTTTTTACACAGTTAAATATTTCGATCTGTGAAAATACAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTCTTTTTAAATAGTCTACTTCTACTTGGTAGATGGTTGTTTATTTTTTCCAAGTTGCAAGCTTTATAACATTTTGGAGCCTCATATGCATGATTTCTGGTTTATGGGACTTGGCTGCTCCTTTTTCTTTATAATGTTAGCACATCTTTCATAATTGTAGAATAAGAAAAACAACTCTTATACTTGACACAAATTAGAGTTAGCATCTTGGATAATCTGGGCAAGTATTTACTCTGTTTCTAATTGTATATTTGAGTAACTTGATAAATTAGGTAATGGCTGGGTATTCTGCTACGAATAGTGCTCATAATGGAGCTTTCTGTGTTCAAATAAACTAATAATTCAGTGTGTAGTTTGTTCAATTGTTCACACTATAATCTTTGTAGAACTATTTGCGAGGTAGGAGCTATTTGCATACCTGTGAAGGAAGGCACAAATAGACACAGGAATGTTAAAATTTAGGGCTCTAACACAGGAAAAACATTTTTATCAAGTGTCAGAGTGTCCAGATAAGAAGGAGGTTATGGCTAAAAAAATATGCTTAGTTTTGTACTTTCCTACTGATTTGCTACCATTATCTTTCAACAGTTGTTTTGATCTTGGTATGAAGCCTATTGAATTAAACAAGTGGGTTTCTATCATTGGTAGTAATTGGCTTGCTTCTTGCTCATAATATTTATGTTGGTCAATCAATTTAATTTGAACTCGTTCCATTTATACGTGTTTAGTTTAAATCTTACTCAGTTAATTAGACATGTATTGTCAATTGTTCTGCTTTACTTCTATGTATTTTCAGGCACTGTTATTATTTGTATGTTTTATTTATTATTTTTGTTATTTATGTATGCTTAGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTACTACAAACTTTTTTATTCGGTTTATTAAATTCCATTTCTATTTCATTACAGTGGTTCTTATATTTCAGTTCTTGAAGTTTGCATAAATAATTGAAACAGAAATTAATATATGGCCATTTGATTTTCCTTTACTTTGTGAATTAATTTCATACTGAGAGCATATATTTTCTGTGGTATTTTAGAGAACACATGTAGTTGAGTGTTGGGTTTTAAAATGCAACACCTTAAAAATTGGCACCAAAATGATAAACCTGTTTAAGTTTAAATCAAAAATAGAAAATAGTGAAACATTTAGGTGCCTTGTACTTGACTTTTATTGATTGGTTTTACCAAGATTCCTCCTTTTCTTTCTTTTCCAGGTGATTCTGATATTATCAAA

Coding sequence (CDS)

ATGGCGCCGGCGAAGAAGACCAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTACTACAAACTTTTTTATTCGGTTTATTAAATTCCATTTCTATTTCATTACAGTGGTTCTTATATTTCAGTTCTTGAAGTTTGCATAA

Protein sequence

MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTNFFIRFIKFHFYFITVVLIFQFLKFA
Homology
[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-47
Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKKTHESINNRLALVMKSGKYTLGYKTVL+++R SKGKLII++NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 104
           EYYAMLAK+GVHHYNG+NVDLGTACGKYYRV CLSI+DPG ++
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.9e-45
Identity = 82/103 (79.61%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           M   KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 104
           EYYAMLAK+GVHHYNG+NVDLGTACGKY+RVSCLSI+DPG ++
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.3e-45
Identity = 84/103 (81.55%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKKTHESIN+RLALVMKSGK+TLGYKTVL ++R +KGKLII++NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 104
           EYYAMLAK+GVHHYNG+NVDLGTACGKY+RV CLSIID G ++
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-44
Identity = 81/103 (78.64%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 104
           EYYAMLAK+GVHHYN +NVDLGTACGKY+RVSCLSI+DPG ++
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.0e-43
Identity = 79/103 (76.70%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           M   KK KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 104
           EYYAMLAK+GVH YNG+NVDLGTACGKY+RVSCLSI+DPG ++
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus])

HSP 1 Score: 206 bits (525), Expect = 1.70e-66
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (519), Expect = 1.39e-65
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (514), Expect = 8.06e-65
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match: XP_022990953.1 (60S ribosomal protein L30-like [Cucurbita maxima])

HSP 1 Score: 201 bits (512), Expect = 1.63e-64
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTV+RTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVIRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match: KAG6602049.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (514), Expect = 2.36e-64
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 34  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 93

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPG ++
Sbjct: 94  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSD 136

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1)

HSP 1 Score: 206 bits (525), Expect = 8.21e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 6.75e-66
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 6.75e-66
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 6.75e-66
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

[Close]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 6.75e-66
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGTTN 103
           EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPG ++
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSD 103

The following BLAST results are available for this feature:
BLAST of Cucsat.G7721.T7 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498841.1e-4785.4460S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
Q8VZ194.9e-4579.6160S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
Q9M5M68.3e-4581.5560S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
Q9C8F74.1e-4478.64Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
Q9LSA36.0e-4376.7060S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1[more]
BLAST of Cucsat.G7721.T7 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140311.11.70e-6697.0960S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa... [more]
XP_008460497.11.39e-6596.12PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib... [more]
XP_022952815.18.06e-6594.1760S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma... [more]
XP_022990953.11.63e-6493.2060S ribosomal protein L30-like [Cucurbita maxima][more]
KAG6602049.12.36e-6494.1760S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cucsat.G7721.T7 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ988.21e-6797.09Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409... [more]
A0A5D3DSZ76.75e-6696.1260S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JWW86.75e-6696.1260S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ... [more]
A0A6J1FH916.75e-6696.1260S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=... [more]
A0A1S3CCQ46.75e-6696.1260S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..106
e-value: 9.1E-49
score: 165.6
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..103
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..101
e-value: 6.7E-21
score: 73.8
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..103
NoneNo IPR availablePANTHERPTHR11449:SF2660S RIBOSOMAL PROTEIN L30-LIKEcoord: 1..103
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7721Cucsat.G7721gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T7.E1Cucsat.G7721.T7.E1exon
Cucsat.G7721.T7.E2Cucsat.G7721.T7.E2exon
Cucsat.G7721.T7.E3Cucsat.G7721.T7.E3exon
Cucsat.G7721.T7.E4Cucsat.G7721.T7.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T7.C1Cucsat.G7721.T7.C1CDS
Cucsat.G7721.T7.C2Cucsat.G7721.T7.C2CDS
Cucsat.G7721.T7.C3Cucsat.G7721.T7.C3CDS
Cucsat.G7721.T7.C4Cucsat.G7721.T7.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T7Cucsat.G7721.T7-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome