Cucsat.G7721.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7721.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L30-like
Locationctg1546: 578290 .. 580371 (+)
RNA-Seq ExpressionCucsat.G7721.T3
SyntenyCucsat.G7721.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGTTTTCATCCGTTTCTTCTTTCAATTTAAGGTTTTATCCTGTATTTGTTTTTTTTTACACAGTTAAATATTTCGATCTGTGAAAATACAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTCTTTTTAAATAGTCTACTTCTACTTGGTAGATGGTTGTTTATTTTTTCCAAGTTGCAAGCTTTATAACATTTTGGAGCCTCATATGCATGATTTCTGGTTTATGGGACTTGGCTGCTCCTTTTTCTTTATAATGTTAGCACATCTTTCATAATTGTAGAATAAGAAAAACAACTCTTATACTTGACACAAATTAGAGTTAGCATCTTGGATAATCTGGGCAAGTATTTACTCTGTTTCTAATTGTATATTTGAGTAACTTGATAAATTAGGTAATGGCTGGGTATTCTGCTACGAATAGTGCTCATAATGGAGCTTTCTGTGTTCAAATAAACTAATAATTCAGTGTGTAGTTTGTTCAATTGTTCACACTATAATCTTTGTAGAACTATTTGCGAGGTAGGAGCTATTTGCATACCTGTGAAGGAAGGCACAAATAGACACAGGAATGTTAAAATTTAGGGCTCTAACACAGGAAAAACATTTTTATCAAGTGTCAGAGTGTCCAGATAAGAAGGAGGTTATGGCTAAAAAAATATGCTTAGTTTTGTACTTTCCTACTGATTTGCTACCATTATCTTTCAACAGTTGTTTTGATCTTGGTATGAAGCCTATTGAATTAAACAAGTGGGTTTCTATCATTGGTAGTAATTGGCTTGCTTCTTGCTCATAATATTTATGTTGGTCAATCAATTTAATTTGAACTCGTTCCATTTATACGTGTTTAGTTTAAATCTTACTCAGTTAATTAGACATGTATTGTCAATTGTTCTGCTTTACTTCTATGTATTTTCAGGCACTGTTATTATTTGTATGTTTTATTTATTATTTTTGTTATTTATGTATGCTTAGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTACTACAAACTTTTTTATTCGGTTTATTAAATTCCATTTCTATTTCATTACAGTGGTTCTTATATTTCAGTTCTTGAAGTTTGCATAAATAATTGAAACAGAAATTAATATATGGCCATTTGATTTTCCTTTACTTTGTGAATTAATTTCATACTGAGAGCATATATTTTCTGTGGTATTTTAGAGAACACATGTAGTTGAGTGTTGGGTTTTAAAATGCAACACCTTAAAAATTGGCACCAAAATGATAAACCTGTTTAAGTTTAAATCAAAAATAGAAAATAGTGAAACATTTAGGTGCCTTGTACTTGACTTTTATTGATTGGTTTTACCAAGATTCCTCCTTTTCTTTCTTTTCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGATTTTTGTGTCATTGAGAACGTTAGTTTATTTTTTTTCTTTTGCACCTTTTCTTTTCAGCAAAGGTAAAAGTTGCACTGATTTTAAAGTCCCCAGAGTAGCTACCAACTTTAAGCATTAAAATTGTATTGTTGATAACCAGATTTTGTCAATGTCTTTGAGGTTTTATGTAGAATGCTCAAGTAGTTTTATACCTATTTATGCATAAACAATTGAGAATCCAAAATCTTCTTTTGCCTTCCAATTACAAGATTGTTTTAGTTCGAAAATGAGTAGGAATTCATCATTTGATCTGAATGCCTCGTATTAGGCTTAAAATTATACCCGTGTTAAATGCTTATTTGC

Coding sequence (CDS)

GATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA

Protein sequence

DGAGEEDRKYHSNLALPFSLWILVFDDFDDLWCCNLQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Homology
[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-52
Identity = 94/105 (89.52%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVL+++R SKGKLII++NNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 143
           K+GVHHYNG+NVDLGTACGKYYRV CLSI+DPGDSDIIK+LPGDQ
Sbjct: 68  KVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-50
Identity = 89/105 (84.76%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEIEYYAMLA
Sbjct: 8   KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 143
           K+GVHHYNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIKS+PGDQ
Sbjct: 68  KVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.2e-49
Identity = 88/105 (83.81%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8   KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 143
           K+GVHHYN +NVDLGTACGKY+RVSCLSI+DPGDSDIIKSLPGDQ
Sbjct: 68  KVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.1e-49
Identity = 89/104 (85.58%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESIN+RLALVMKSGK+TLGYKTVL ++R +KGKLII++NNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGD 142
           K+GVHHYNG+NVDLGTACGKY+RV CLSIID GDSDIIKS+PGD
Sbjct: 68  KVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-48
Identity = 87/105 (82.86%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8   KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 143
           K+GVH YNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIK+LPGDQ
Sbjct: 68  KVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus])

HSP 1 Score: 216 bits (550), Expect = 4.59e-70
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 3.77e-69
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match: XP_022141723.1 (60S ribosomal protein L30-like [Momordica charantia])

HSP 1 Score: 212 bits (539), Expect = 2.18e-68
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           K+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match: PHT34863.1 (60S ribosomal protein L30 [Capsicum baccatum] >TMW91021.1 hypothetical protein EJD97_014913 [Solanum chilense])

HSP 1 Score: 208 bits (530), Expect = 4.38e-67
Identity = 97/107 (90.65%), Postives = 105/107 (98.13%), Query Frame = 0 

Query: 36  LQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAM 95
           +QKKTHESINNRLALVMKSGKYTLGYKTVL+T+R SKGKLII++NNCPPLRKSEIEYYAM
Sbjct: 1   MQKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAM 60

Query: 96  LAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           LAK+GVHHYNG+NVDLGTACGKYYRV CLSIIDPGDSDIIKS+PGDQ
Sbjct: 61  LAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGDQ 107

[Close]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208 bits (529), Expect = 7.30e-67
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           K+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLP +Q
Sbjct: 68  KVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPSEQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1)

HSP 1 Score: 216 bits (550), Expect = 2.22e-70
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 1.83e-69
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 1.83e-69
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 1.83e-69
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 1.83e-69
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 38  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLA 97
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 98  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 142
           KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 68  KIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

The following BLAST results are available for this feature:
BLAST of Cucsat.G7721.T3 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498843.5e-5289.5260S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
Q8VZ193.3e-5084.7660S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
Q9C8F76.2e-4983.81Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
Q9M5M68.1e-4985.5860S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
Q9LSA31.4e-4882.8660S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1[more]
BLAST of Cucsat.G7721.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140311.14.59e-70100.0060S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa... [more]
XP_008460497.13.77e-6999.05PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib... [more]
XP_022141723.12.18e-6897.1460S ribosomal protein L30-like [Momordica charantia][more]
PHT34863.14.38e-6790.6560S ribosomal protein L30 [Capsicum baccatum] >TMW91021.1 hypothetical protein E... [more]
XP_022952815.17.30e-6795.2460S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma... [more]
BLAST of Cucsat.G7721.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ982.22e-70100.00Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409... [more]
A0A5D3DSZ71.83e-6999.0560S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JWW81.83e-6999.0560S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ... [more]
A0A6J1FH911.83e-6999.0560S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=... [more]
A0A1S3CCQ41.83e-6999.0560S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 35..137
e-value: 1.0E-50
score: 171.9
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 43..136
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 43..135
e-value: 3.1E-22
score: 78.1
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 37..142
NoneNo IPR availablePANTHERPTHR11449:SF2660S RIBOSOMAL PROTEIN L30-LIKEcoord: 37..142
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 54..78
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 110..130
IPR000231Ribosomal protein L30eHAMAPMF_00481Ribosomal_L30ecoord: 42..139
score: 21.139532

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7721Cucsat.G7721gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T3.E1Cucsat.G7721.T3.E1exon
Cucsat.G7721.T3.E2Cucsat.G7721.T3.E2exon
Cucsat.G7721.T3.E3Cucsat.G7721.T3.E3exon
Cucsat.G7721.T3.E4Cucsat.G7721.T3.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T3.C1Cucsat.G7721.T3.C1CDS
Cucsat.G7721.T3.C2Cucsat.G7721.T3.C2CDS
Cucsat.G7721.T3.C3Cucsat.G7721.T3.C3CDS
Cucsat.G7721.T3.C4Cucsat.G7721.T3.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7721.T3Cucsat.G7721.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome