Cucsat.G7523 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G7523
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Regulator of Vps4 activity in the MVB pathway protein
Location	ctg1528: 4047841 .. 4053383 (+)
RNA-Seq Expression	Cucsat.G7523
Synteny	Cucsat.G7523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATAAATAAATAAACAATTAAAGTAAAAAAGAAAAAAAAGAAAAAAAAAAACTCGTAAAGTTGATGATCGGTACACGGAAAGGAAGTCCTTTTTCAGTTGCTCTTTCTTCGCTCCGACTTCGTTTCCTATTCATTCTTCTTCATTACTATATCTTCTTCAATCATCCTAATTCATTCATTCATTCTTCTTCTTAATCTTCACGGTTCCATTTCACATCCTTTCTTCAAAGGATTTTTGTTAGGAAAAAAGAGTTTCGGTGCGTAATTGTCCCGCCAGCTTAACCTTTGTTGTTTGTTCCCACCGCGTTGAGATCTGGTTTCTTTCGATTCCTTCTACGATGCTAAGCAAGAGCTTCAAGCCTGCGAAATGGTAGGTTTGAGATTTCTTCAACTTAATCCTTGTAGTTTTTGTTCTGTTGTTGGGTACTTTTGGCTGGGATCAATTTATTGACTTTTTTTTTTTTGCATTTTTTGTTTGAATTGGGTTGGGTCGGTGCAGTAAGACATCGCTGAAGTTAGCGGTTTCGCGGATTAAGCTTTTGAGGAATAAGAAAGATGTTCATATTAAGCAGCTTAAGGGAGATTTGGCTAAGTTGCTTGAGGCTGGACAAGACCAGACTGCTAGAATTCGGGTATTTTAGTGTTGTTCTTTGACTCTGGAATTGATTGTATTTATTTGTGTCTTTATCAAGTCACCGTGTTTTTTAGACCTAATGTCATATGGGAAGATGAACTTTATCGTGCGTCAATTTGATGATTCCTTTTCCGAAGAATTTACGTTTCCATCTTGTTTCAGGTTGAACACTTTGTTAGAGAAGAGAAATCGAAGGAAGCTTATGAACTCATTGAAATATTTTGTGAGCTAATTGTGGCGCGCATGCCAATGATTGAGTCCCAAAAGTATGTTAATTTCTTTTTTATTGAAGTTATTTTTGTTGATTTCTCATGAACTTCGCTGCCTATAGGGTATGCTTTGATTTCAGAATGTGCATTTGTATTCGACTTCACATGGTTGTGATTTCTTTTAAAGCAAAATTTTGCCCTCGTGACGTATGTGTTAACTTCTGATTTCTGAGCATAATGAATGTACTCCTATTAATTCGGTTTATGTTTTCATGTTCAGAAATTGTCCCATAGATTTGAAGGAAGCAGTCTCGAGTGTTATATTTGCATCACCCAGATGTGCAGATATTCCAGAGCTCTTGGATGTTCGTAAACACTTTAAATCAAAGTATGGAAAAGAATTTGTCTCGGCCGCAGTGGAGCTGCGCCCAGAATGTGGAGTGAATCGCATGGTAAATGTGTTAGCTGTTTTGTGTTCATAAACTTAGGGAGTGTGGGTTCTCTCTATGAAGATAACTTGGTTCCATTGACTTTCCTTCCATTCTTACAACTTTCCAGTTAGTCGAAAAACTATCTGCTAAAGCACCGGATGGGCAGACCAAACTTAAAATCTTGACTGCAATTGCTGAGGAGTATAACATCAAATGGGACCCAAAATCCTTTGGTGACAGCATCAACCCTCCGGCTGATTTGTTGGTAATTTTAGTTTTTATAAAAAAGAACTATTTCCTTCAATGCTCAAGGTGTTTTTATCAGGAAATGAAGACTTACCTGAATTATTTTATTTTAATATTGAATTTCGGTTTTAGTAATACTAGTTATGAACTTTGTTGAGCAGAGTGGACCAAATACTTTTGGGAAGGCTAGTCAAATACAGATGGAGTCTATTAGTGGCCCATCTTCATTTGATCACAAAGAATCTTCTAGAAAACATGTTCCATTCAAACCTGATGAAAGGCCTCATGTACCCGAGAGATCCCCTGAACACAGTTTGAGATCAGAACATCAGTCCAAACAATCCAACTTTGCTCACGTTAATGCCAATCAAAGCAACATCACTGGCCGTCATAATTCAGAAACATCTTTTGGTATGTGAAAATTATATCTGATGCAATCATCTTCATTTCTTTCTTCTCTATGTACGTGCTACACATACATATTGAAGACAGTTACTTTTGTTTGAATTTGCAATTGTTGGTTATATATTGAAACTGTGATATGCGTAAATTAATGCAGAGGGGATGCATAGGCACTCAAATTCTGGTGAACAAAATAATTACTCTTCAGGTAGGCAGCAGTGGAGTATGGATTTTAAGGATGCTACCTCTGCTGCAAAGGCAGCGGCTGAATCTGCAGAACTAGCAAGTCTAGCTGCCCGAGCTGCTGCAGAACTTTCCAGTCGTGGAAACATCTCCCAACCATCCTCTTCTGAGTTTCAGAAATCTTCGTCTTATAATTTAAGGGCAGAAGGACCTCAAGGATACCCTAGTGTCCATTTACGTGATCAACAGCTTCCTAAAGACCAAGTTGTCAGTGCACCTCGTAAAAGTTCTACGCCGGATGATAATTGGAGAGACAATGAGACAAGAACATACATGGGGGATAATTCCAAGAATTATAGTTATCCATCTTCAAGCGTTAGTAACAATGATGTCAACATATCTGTGACCAATCTCAGTGCAGCAGAAAGATCCTCTTTCAAGAAATCATCCGAACCTAGGTTTAGCGGTTCCCTTGGTAGTAGTGCAACTTTGGAGAAACAAACCAGAAAACATGATGCCAGCACGTCTGTAACCAGTTTCAATGCTGCAGATAGATACTCTTTCAAGAATTCATTCGAACCTGGGGTCAGTGGCTCTCTTGATAGTGGGGATGAACAACCCAGAAATTTTAGTTCCAACATATCTTCCACTAATTTCAACGAATCAGACACATACTCGCTCAACAAGCCGTCTGAATCTGGGTTTAGTGACTCTTTAGGTAGAACCAGTATGGAGAAACAACCCCGAAATGTTGATGTAGAATATGTTAGCGATCAGCCATTTAGTACGGGTTTTGACAGAACTAGTTCCTATGGAGATGTGAGGATTGAAAGTGATTCAATTAAAGTGCCTTCCCACGAGAAGTTGGGGAATGATGCCTATGAGAACCCTTTTGCCATGGATAAACCAAATGAGAGTGAAAGTACTGTTGATATGAGTTTTTATGACCATGCCAGTGTGGTCTTTGATGATTATGGTCCAGATGATGATTATATTCCAGACTACGATATCCCGAGGAGAGAATCAATTCCAGACCTTTCGTCACCTAAAGGAAAGGTGCCAATAAATCCATCACCAGATGATACTTGGATCTTCAACGGGAACAAGAATGATTCTGCTGAGAAGGCTGTTTCACACGCTCAAATTTCTGATCATACTTCACTGTTTGCTGAAAGTATTGGAGCTTTTGATGATCCTTCCCATTCTGATGAGTTGTTGCCGGCAACTTTTGACCATTCAGATGGATCTGGTTCTGAAAGTGAGGAAGAGTTGAAAGAATCTGAGATCATTGCTAAAGAAAACTCTAGTGAATTCTGCAAGAAGCAGGATTTGTACTCTGAAAAATCAGAATGGACTCGGAACATTAGTCATGGATTATCTGGATCTTCAGATGAGGACAGTAGTAGCATGCCATCTCATCGCCTCTCTTCTGAGCTAAACTCTGTACATGAATCGAAGAAGAACGACAGCCCACTGAGTTCTCCTGATATTGTAGAAGAATCAACTTCAGATGGCAGCAGTGGCTTGAATTTCGGGAAACTGAAAGGTGGCCGAAGAAACCAAAAAAGTAATAAGCTTCCATTTGCAAACAATTCATCAAGAAATGACTCATCATCTAAACAAGCATACGAAAACGATGCCTCAAAAACTGAGCAGTCTACCTTCATTTCTTCTTCTACAGCTAGGACTTCGTTGCGATCAAAGGCTTCTGAAGAGACATATGCTACAAGTGTAGAAGAGAGACGAGGTCAAGAAAAGGAATCACAAACCAAGCTTAATAGCTTTAATTCCAATCTTGATGATTCAAAGGAGAAGTTCTCGGTTTATACTCTTAGAAGTGATCAAGAGCCACATAGCAAGAACGTGGTTGATGAAATCTTGAAGAATCCAGCCCCAACAAGAGTTGCAGTTAAGTATCCTGGTTTCCACAATGACGATGATTCTGACGAAGATTTGCCTGAACAAAATATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGTTCAATCAAGTAACTCAGAGCAACCTCAGTCAATGAAACCTTCCAAACCAATTCCTGAAACTAAAAAATCTATCCATGAAGAAAAATTAAAATCTCCTACGAAGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAAATCTAGTTTCTTGGCGTTGATTTATACTTATACAGTTATACATACGACATAAATATATTTTTTGATTTATTAATTTAATTAGTCCATGTTCATGGTTATTTATTAGATAGCTCTTATTCATGATTCGAACTCTAAAGGATACATCAGATGTACAGGTTAGATTAATGGTTTGTTGTTTAGGAAAAAGCAATCAGAAGCTAATTGTGGAAATCACATAAAAGCTTTCCCAATTAATTAGCCTAAAGGTCAGATAGGCCATAATGTGTAAATGGAGAAAGGTATCTACACCACAATAAAGCTAGAGAAAGAACCAATTCTTAGAATCTACCACTAAAAAGGAGATATGTTGTTGAAAATCTGATTGTACCTTTCAGTCCATAATGACCAGAAAAAAAAAAAGGCTCTGACAGGCTTAAGACACAAGATCTCCTTTCCTTTCTAAAAGGATGATCTATCAAAAACGAAGTTATGGAAGACTCCCATATTGGATGCCAAAGGAATATGCCAACCAGGATGATAGGATCCAAGCCTCCGAAATGATAGGAGAGGTTACTTTAAGGTAGAAAGATCTTCCTATGGTAGAAGAGCTTCTACAAAGAACGTGTCATTTTGCTTTTCTACCCAGGTTACATTGGTGTCACTAAAAGATCTTAAGTTTAAATCCTATTCGAAAATTCTCATAACCTGTTAAAGGTGTTAAAGGTCATGAGTTCAAGTCGTTTTTTGAGAACGTGTCATTAGTTGATCAAGGTCATAAGAATTCTAGAAACTGTTAGTCTTATGCATTAAAAAGTATCATTTAGTTCAAAAGAATGGCTTCAAGAATTAAGGTGTGTATTTAATGCATTAAATAT

Coding sequence (CDS)

ATGCTAAGCAAGAGCTTCAAGCCTGCGAAATGTAAGACATCGCTGAAGTTAGCGGTTTCGCGGATTAAGCTTTTGAGGAATAAGAAAGATGTTCATATTAAGCAGCTTAAGGGAGATTTGGCTAAGTTGCTTGAGGCTGGACAAGACCAGACTGCTAGAATTCGGGTTGAACACTTTGTTAGAGAAGAGAAATCGAAGGAAGCTTATGAACTCATTGAAATATTTTGTGAGCTAATTGTGGCGCGCATGCCAATGATTGAGTCCCAAAAAAATTGTCCCATAGATTTGAAGGAAGCAGTCTCGAGTGTTATATTTGCATCACCCAGATGTGCAGATATTCCAGAGCTCTTGGATGTTCGTAAACACTTTAAATCAAAGTATGGAAAAGAATTTGTCTCGGCCGCAGTGGAGCTGCGCCCAGAATGTGGAGTGAATCGCATGTTAGTCGAAAAACTATCTGCTAAAGCACCGGATGGGCAGACCAAACTTAAAATCTTGACTGCAATTGCTGAGGAGTATAACATCAAATGGGACCCAAAATCCTTTGGTGACAGCATCAACCCTCCGGCTGATTTGTTGAGTGGACCAAATACTTTTGGGAAGGCTAGTCAAATACAGATGGAGTCTATTAGTGGCCCATCTTCATTTGATCACAAAGAATCTTCTAGAAAACATGTTCCATTCAAACCTGATGAAAGGCCTCATGTACCCGAGAGATCCCCTGAACACAGTTTGAGATCAGAACATCAGTCCAAACAATCCAACTTTGCTCACGTTAATGCCAATCAAAGCAACATCACTGGCCGTCATAATTCAGAAACATCTTTTGAGGGGATGCATAGGCACTCAAATTCTGGTGAACAAAATAATTACTCTTCAGGTAGGCAGCAGTGGAGTATGGATTTTAAGGATGCTACCTCTGCTGCAAAGGCAGCGGCTGAATCTGCAGAACTAGCAAGTCTAGCTGCCCGAGCTGCTGCAGAACTTTCCAGTCGTGGAAACATCTCCCAACCATCCTCTTCTGAGTTTCAGAAATCTTCGTCTTATAATTTAAGGGCAGAAGGACCTCAAGGATACCCTAGTGTCCATTTACGTGATCAACAGCTTCCTAAAGACCAAGTTGTCAGTGCACCTCGTAAAAGTTCTACGCCGGATGATAATTGGAGAGACAATGAGACAAGAACATACATGGGGGATAATTCCAAGAATTATAGTTATCCATCTTCAAGCGTTAGTAACAATGATGTCAACATATCTGTGACCAATCTCAGTGCAGCAGAAAGATCCTCTTTCAAGAAATCATCCGAACCTAGGTTTAGCGGTTCCCTTGGTAGTAGTGCAACTTTGGAGAAACAAACCAGAAAACATGATGCCAGCACGTCTGTAACCAGTTTCAATGCTGCAGATAGATACTCTTTCAAGAATTCATTCGAACCTGGGGTCAGTGGCTCTCTTGATAGTGGGGATGAACAACCCAGAAATTTTAGTTCCAACATATCTTCCACTAATTTCAACGAATCAGACACATACTCGCTCAACAAGCCGTCTGAATCTGGGTTTAGTGACTCTTTAGGTAGAACCAGTATGGAGAAACAACCCCGAAATGTTGATGTAGAATATGTTAGCGATCAGCCATTTAGTACGGGTTTTGACAGAACTAGTTCCTATGGAGATGTGAGGATTGAAAGTGATTCAATTAAAGTGCCTTCCCACGAGAAGTTGGGGAATGATGCCTATGAGAACCCTTTTGCCATGGATAAACCAAATGAGAGTGAAAGTACTGTTGATATGAGTTTTTATGACCATGCCAGTGTGGTCTTTGATGATTATGGTCCAGATGATGATTATATTCCAGACTACGATATCCCGAGGAGAGAATCAATTCCAGACCTTTCGTCACCTAAAGGAAAGGTGCCAATAAATCCATCACCAGATGATACTTGGATCTTCAACGGGAACAAGAATGATTCTGCTGAGAAGGCTGTTTCACACGCTCAAATTTCTGATCATACTTCACTGTTTGCTGAAAGTATTGGAGCTTTTGATGATCCTTCCCATTCTGATGAGTTGTTGCCGGCAACTTTTGACCATTCAGATGGATCTGGTTCTGAAAGTGAGGAAGAGTTGAAAGAATCTGAGATCATTGCTAAAGAAAACTCTAGTGAATTCTGCAAGAAGCAGGATTTGTACTCTGAAAAATCAGAATGGACTCGGAACATTAGTCATGGATTATCTGGATCTTCAGATGAGGACAGTAGTAGCATGCCATCTCATCGCCTCTCTTCTGAGCTAAACTCTGTACATGAATCGAAGAAGAACGACAGCCCACTGAGTTCTCCTGATATTGTAGAAGAATCAACTTCAGATGGCAGCAGTGGCTTGAATTTCGGGAAACTGAAAGGTGGCCGAAGAAACCAAAAAAGTAATAAGCTTCCATTTGCAAACAATTCATCAAGAAATGACTCATCATCTAAACAAGCATACGAAAACGATGCCTCAAAAACTGAGCAGTCTACCTTCATTTCTTCTTCTACAGCTAGGACTTCGTTGCGATCAAAGGCTTCTGAAGAGACATATGCTACAAGTGTAGAAGAGAGACGAGGTCAAGAAAAGGAATCACAAACCAAGCTTAATAGCTTTAATTCCAATCTTGATGATTCAAAGGAGAAGTTCTCGGTTTATACTCTTAGAAGTGATCAAGAGCCACATAGCAAGAACGTGGTTGATGAAATCTTGAAGAATCCAGCCCCAACAAGAGTTGCAGTTAAGTATCCTGGTTTCCACAATGACGATGATTCTGACGAAGATTTGCCTGAACAAAATATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGTTCAATCAAGTAACTCAGAGCAACCTCAGTCAATGAAACCTTCCAAACCAATTCCTGAAACTAAAAAATCTATCCATGAAGAAAAATTAAAATCTCCTACGAAGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

Protein sequence

MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFVREEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVRKHFKSKYGKEFVSAAVELRPECGVNRMLVEKLSAKAPDGQTKLKILTAIAEEYNIKWDPKSFGDSINPPADLLSGPNTFGKASQIQMESISGPSSFDHKESSRKHVPFKPDERPHVPERSPEHSLRSEHQSKQSNFAHVNANQSNITGRHNSETSFEGMHRHSNSGEQNNYSSGRQQWSMDFKDATSAAKAAAESAELASLAARAAAELSSRGNISQPSSSEFQKSSSYNLRAEGPQGYPSVHLRDQQLPKDQVVSAPRKSSTPDDNWRDNETRTYMGDNSKNYSYPSSSVSNNDVNISVTNLSAAERSSFKKSSEPRFSGSLGSSATLEKQTRKHDASTSVTSFNAADRYSFKNSFEPGVSGSLDSGDEQPRNFSSNISSTNFNESDTYSLNKPSESGFSDSLGRTSMEKQPRNVDVEYVSDQPFSTGFDRTSSYGDVRIESDSIKVPSHEKLGNDAYENPFAMDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSPDDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSESEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSELNSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSSRNDSSSKQAYENDASKTEQSTFISSSTARTSLRSKASEETYATSVEERRGQEKESQTKLNSFNSNLDDSKEKFSVYTLRSDQEPHSKNVVDEILKNPAPTRVAVKYPGFHNDDDSDEDLPEQNMKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAKTGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESSKFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK

Homology

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BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot
Match: P53990 (IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 52/132 (39.39%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML   FK  + + +L+L ++R+KLL  KK    ++ + ++A  L AG+D+ ARIRVEH +
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRC-ADIPELLDV 120
           RE+   EA E++E++C+L++AR  +I+S K     L E+VS++I+A+PR  +++ EL  V
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 121 RKHFKSKYGKEF 132
                +KY KE+
Sbjct: 121 ADQLCAKYSKEY 132

[Close]

BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot
Match: Q9CX00 (IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 52/132 (39.39%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML   FK  + + +L+L ++R+KLL  KK    ++ + ++A  L AG+D+ ARIRVEH +
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRC-ADIPELLDV 120
           RE+   EA E++E++C+L++AR  +I+S K     L E+VS++I+A+PR  +++ EL  V
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 121 RKHFKSKYGKEF 132
                +KY KE+
Sbjct: 121 ADQLCAKYSKEY 132

[Close]

BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot
Match: Q568Z6 (IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 52/132 (39.39%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML   FK  + + +L+L ++R+KLL  KK    ++ + ++A  L AG+D+ ARIRVEH +
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRC-ADIPELLDV 120
           RE+   EA E++E++C+L++AR  +I+S K     L E+VS++I+A+PR  +++ EL  V
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 121 RKHFKSKYGKEF 132
                +KY KE+
Sbjct: 121 ADQLCAKYSKEY 132

[Close]

BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot
Match: Q54I39 (IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 50/125 (40.00%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 5   SFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFVREEK 64
           S+   K K  LKLAVSRI++L+NKK   ++  K ++A+LL    +++ARIRVE  +R+E 
Sbjct: 7   SYDSYKLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRDEY 66

Query: 65  SKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVRKHFK 124
             E +++IE+ CEL+ AR+ +I +    P+++KE++ +++++S R   IPEL  ++   K
Sbjct: 67  LIECFQIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQR-IQIPELEQIKNQLK 126

Query: 125 SKYGK 130
           +KYGK
Sbjct: 127 AKYGK 130

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BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot
Match: Q3ZBV1 (IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 51/132 (38.64%), Postives = 86/132 (65.15%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML    K  + + +L+L ++R+KLL  KK    ++ + ++A  L AG+D+ ARIRVEH +
Sbjct: 1   MLGSGIKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRC-ADIPELLDV 120
           RE+   EA E++E++C+L++AR  +I+S K     L E+VS++I+A+PR  +++ EL  V
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 121 RKHFKSKYGKEF 132
                +KY KE+
Sbjct: 121 ADQLCAKYSKEY 132

[Close]

BLAST of Cucsat.G7523 vs. NCBI nr
Match: KAE8653413.1 (hypothetical protein Csa_007078 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 2.60e-94
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. NCBI nr
Match: XP_031745744.1 (IST1-like protein [Cucumis sativus] >KAE8637468.1 hypothetical protein CSA_004501 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 2.15e-90
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. NCBI nr
Match: XP_031742590.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101217093 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 6.28e-86
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. NCBI nr
Match: XP_008450820.1 (PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo] >TYK10119.1 Ist1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 281 bits (720), Expect = 2.73e-85
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML+KSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLNKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. NCBI nr
Match: XP_038879144.1 (uncharacterized protein LOC120071136 [Benincasa hispida])

HSP 1 Score: 277 bits (708), Expect = 1.44e-83
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML KSFKPAKCKTSLKLAVSRIKLLRNKKDV IKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLHKSFKPAKCKTSLKLAVSRIKLLRNKKDVQIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPEL+DVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELMDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL
Match: A0A0A0LWR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 5.30e-86
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL
Match: A0A5D3CIP5 (Ist1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002620 PE=3 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.32e-85
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML+KSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLNKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL
Match: A0A1S3BQ24 (uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=3 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.32e-85
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML+KSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLNKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFKSKYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKSKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL
Match: A0A6J1EJ03 (uncharacterized protein LOC111434877 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434877 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 8.62e-84
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML KSFKPAKCKTSLKLAVSRIKLLRNKKDVH+KQLKG+LAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLHKSFKPAKCKTSLKLAVSRIKLLRNKKDVHVKQLKGELAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKE+VSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKESVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFK+KYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKAKYGKEFVSAAVELRPECGVNRML 148

[Close]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL
Match: A0A6J1KTU3 (uncharacterized protein LOC111496330 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496330 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 9.61e-84
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MLSKSFKPAKCKTSLKLAVSRIKLLRNKKDVHIKQLKGDLAKLLEAGQDQTARIRVEHFV 60
           ML KSFKPAKCKTSLKLAVSRIKLLRNKKDVH+KQLKG+LAKLLEAGQDQTARIRVEHFV
Sbjct: 1   MLHKSFKPAKCKTSLKLAVSRIKLLRNKKDVHVKQLKGELAKLLEAGQDQTARIRVEHFV 60

Query: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKEAVSSVIFASPRCADIPELLDVR 120
           REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKE+VSSVIFASPRCADIPELLDVR
Sbjct: 61  REEKSKEAYELIEIFCELIVARMPMIESQKNCPIDLKESVSSVIFASPRCADIPELLDVR 120

Query: 121 KHFKSKYGKEFVSAAVELRPECGVNRMV 148
           KHFK+KYGKEFVSAAVELRPECGVNRM+
Sbjct: 121 KHFKAKYGKEFVSAAVELRPECGVNRML 148

The following BLAST results are available for this feature:

BLAST of Cucsat.G7523 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53990	5.1e-20	39.39	IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1	[more]
Q9CX00	5.1e-20	39.39	IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1	[more]
Q568Z6	5.1e-20	39.39	IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1	[more]
Q54I39	1.9e-19	40.00	IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1	[more]
Q3ZBV1	2.5e-19	38.64	IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1	[more]

BLAST of Cucsat.G7523 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653413.1	2.60e-94	99.32	hypothetical protein Csa_007078 [Cucumis sativus]	[more]
XP_031745744.1	2.15e-90	99.32	IST1-like protein [Cucumis sativus] >KAE8637468.1 hypothetical protein CSA_00450...	[more]
XP_031742590.1	6.28e-86	99.32	LOW QUALITY PROTEIN: uncharacterized protein LOC101217093 [Cucumis sativus]	[more]
XP_008450820.1	2.73e-85	98.65	PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo] >TYK10119.1 Ist1 ...	[more]
XP_038879144.1	1.44e-83	97.30	uncharacterized protein LOC120071136 [Benincasa hispida]	[more]

BLAST of Cucsat.G7523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWR1	5.30e-86	99.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=3 SV=1	[more]
A0A5D3CIP5	1.32e-85	98.65	Ist1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BQ24	1.32e-85	98.65	uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=...	[more]
A0A6J1EJ03	8.62e-84	95.95	uncharacterized protein LOC111434877 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTU3	9.61e-84	95.95	uncharacterized protein LOC111496330 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 12..176 e-value: 7.2E-60 score: 201.6
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 3..193
IPR042277	Vacuolar protein sorting-associated protein IST1-like	GENE3D	1.20.1260.60		coord: 1..185 e-value: 1.9E-76 score: 257.8
None	No IPR available	PANTHER	PTHR12161:SF13	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 3..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G7523.T1	Cucsat.G7523.T1	mRNA
Cucsat.G7523.T2	Cucsat.G7523.T2	mRNA
Cucsat.G7523.T3	Cucsat.G7523.T3	mRNA
Cucsat.G7523.T4	Cucsat.G7523.T4	mRNA
Cucsat.G7523.T5	Cucsat.G7523.T5	mRNA
Cucsat.G7523.T6	Cucsat.G7523.T6	mRNA
Cucsat.G7523.T7	Cucsat.G7523.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport