Cucsat.G647 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G647
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Methyl-CpG-binding domain-containing protein 13 isoform X1
Location	ctg1: 12649855 .. 12654518 (-)
RNA-Seq Expression	Cucsat.G647
Synteny	Cucsat.G647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTAGCGCTTTCAATCCTCTGCTTTACTTCCAATTACTTAACATACTCCTCCACCTTAACCGTTGGTAACATTTGAATTCACCTCCTTTTTCGGGTCCAAAGAACCAATCCAAGATCCTCAAAGATGGGTTGTACAGAATTTTGAAGGGAAGACTTGTAGAGGATAATCCATGGGGTTCCGACACGTTTATATGACTCGCAGGGTATTTCTCAGAACACGTGGTTTTGAAAGAATATTTTGTCGGAATCCTCCATTTCTAACGTCCTCTTCAAGAGATTTGACTCTAAAATCAGAAACTTGGGTGCCTGAAAGAGAGAAAAATAGAGAGGGTTATTGAGATTGACCGGTGGGTGAACGGAAAGTCTGAGTTTTCCGGGTGAATGATGAACCAAAATTCAAAAGACTTGCTACCACCTGGCTGGACTGTGAAAGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGGTACTGATTTTTCTTGTCAATGGGTTTTCTTTCCCTTTGATTTCTTTTTACTTGCATTTCGTAGATCTTTAGCTGTTTTGTAAGTTTTATGTTCTACGTTGCTGTTACAACTAGCTCTTGATTTGATTTCACTCTCCTGCTCAACTTGTGTGCTGTTGGTGTATACGGAAAATGTGTTCTTTTTGCCTTGTTAGTTAGTGGTGGGAATGCAACCGAAGTCCCATAGATAAGGCCTAAGGGACGATAATGAGTATATCTTCGTTATTATGAGGAGGCCTTTTGATTTCATTAGTACGAGGCCTTTGGAGTGTTGCTCACCTAGGTGTTAGAAACTATGACTTCTGATGGGAAATTTTGGCTGTGTAGACAGTTAAAAGAAAGGAGATAGATGACTAATATTTGGGGAGAAAGTGTGTTGTCTTGTGTATGCTTCTGATATTGGACCTATTAGCTAAAACTTTCCTATGACTTTCTGATCTGAGTAAATGACTTGCCTTCTTCAGCTCCTATGGCTATGATTCCCTCATATAATTTTTGGCCAAGTTTTCCCATCAGTTTAAAGTTTCTATTTGCATTGTGAATGAACTATTTTTTATCTCTTGTTAGGCCCTTTCTGTTTAGGCTTGTGTGAAACAGCAAACTGTAATGTCATTTTTCATTCAAAAGATGCAAGATGCAACTAAAGCTTGCGTTAGTGTAACTTCCATTAACATCTTAACAAAAGAACATGTTTCTTCCTCCTAATGTCTTCTGGTTATTTGCTTTTGGTATTCAAATATGTTTTTTTTTTTTTTTTTTGATAAGAGAAAAAGAAAAAGGTATTCAAATATGTATTTGATAACCATGAATCCTATTATCATGTGGAACGTTAATACGAAAAGGAAGTCTGTATAAAGATCAGATAACTGATGGTGGCCAATAATGTTCTGTTCATTTTAAGATAAATAATTAGTTGGATCTTTGTGACTGATTCTAATGTTGCAGTATTATTTTGAACCCTCAAGTCAAATGAGATTTAATTCTAGGGCAGAGGTGTTTAGATACCTCAAAACTGCAGCTATCTGTCATCCTGAATCTGAAGAGAGCAGAACCGTCAAGGAACCAGGGAACAATGTCTGTCAAAAAAATCTACCCTCTACTCTATTTTTTGTGTTCCAATTCGCTGGTCTTTTGGATTATGAACTTTATTGATTTTTCTTTAAAAACTTCTATTATTCAAGCAATCTAGGTGGAAGTTAAGAAGACTATAGCAAAAGATTTACCTACTGGATGGATCGGAGAAATCAGAGAAACGAAGACTGCTAACAGAATAAGAAGAGATTCAGTAATTTATCATCTATTTCTATTTGTTGTGTCCTTTGGAATTTGGATATACTATCTAACCATGCACTCTGTTTCATTTATATATTTAGTGCCTTAAAGCTAGTGACATGCTAAACAACATGAATGTTAACAAATGAACTTCTGTTTGCAGTCTTACATTGATCCAGTAAATGGAAATGCACTTCGTTCAATAAGGGATGTACATCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAACACATAAATCAAGGAACCAGAGAGACAACAACATTGAGTTTCAACATGATGAAATCTCTGTAAGTGTTCTTGAGGTACTCAAAGTTAAAAATGATTAGGGTCTCAAGAGTTTTCATCAGTTGGTTCAACTATCACTTAATGAAATAAGTGTAGTATTTTGGAGTGATGCCCCTCGTCGGTTCTCTCTCTCCAATGTGGGTCCTTGCTATTCACATAATTCAATATTTATGCCCTCATCGATTCTCTCTATGTATCAACGGCTGAAATTTGGGTGAATTCATCTCATCTAAAATATGTACATAAATTTTGGACTTCAATCAGGGATCTCAAATTGATGGAACCCATAAATAATATTCTAGTAACTACTTGGCAATCAAGGACAATTTGAGAGACTGAAATGTCATCAAGATTACACTGAAATGTTAAAACCAATATTGAATTAGGATCGTAAAACATGATAACAGTGGAGAATAGGGTTGGGGGGTTGGTTTGAAAAGGGTGGGAAGGAAATGTAATAGGGATTACACACCGGGCCCAAAGCCCTCATTCCAAATGCAGGTTTGAAATTACAAACCATTACAAACTCATTATATTTCAGCCTCCCAAACAGACCCTAAGTATGGTTGTATTACAATAGCGCAAGGTTTCTTTCTCTCTCGAGAATTAGACTGTAGAGTTGAGATTGGAAACAACTTGGTTACTTGCTTGTCCCTAAACATGGATAGATAAGTAAATAACATCATTTCCTTCTTAATTATTCTGTTTCTTTGACTAGTTGCACTAAACATTCCTGCTTCTGAAGTATTTTAAACCGGAAGTGCAAAAAGAAAACTGTTTCAAACTTAAGTTGATTATTCTTACCTTAGCACTAAATTTCTTATTTCCTTCTCTATTAGTCACCTGTTGTCTCCAAGAAAGAGGTGCTAACTATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAACACATCAGAACCCAGTGAAATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGTAGTGTTCTGAACATGCAGCTTTAGTGTGACATACTTAATTTGACAAACACCCCATTCTTTCCTATCTTCATCACTTATCTCTGTGTAAAGTAGAGGTTTGTTTAGAGTGGAAGGTTCATGCTTTTTAAACAATCTAGCTAAAGATTTCAGTTTCTGTTCTAGAAAAGGGTTTTTTCTTCCTTTCCTTAATTTTTCTGAAAAAATTGAAATGAAAATGTTGAGTGCTTCTGCCAATTGAAGATTATATCTAATGTGAATTTTTAAATTACCGCAGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAATACCAACTTCATAAAATGTACAGTTTTGGTTGGCAGCATAGAAAAGAAAAAAAAAAAGTTTTTCTTCTTGTGTACCTTTCCCTTTTTCATGTTATATTTACTAGTTTTTCATGTTATATTTACTAGTTTTGTTAGTTGTGGTCAGGCAACCCTCTTTTGCCCAAGTTTTGTACCTTATCACATGGGCAACTTAATGTGCTGTATGCTACAAACAGGACTTGATTTTGACTTAGTTCTAACTTACCTTCTGTTAGCTGACCTAGTATGGGTAATTTAATTTGCAGTTCAATCTAGATTAGTGTATCTT

Coding sequence (CDS)

ATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAA

Protein sequence

MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH

Homology

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BLAST of Cucsat.G647 vs. ExPASy Swiss-Prot
Match: Q9LTJ8 (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=MBD13 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.0e-11
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 367 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 426
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 427 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 486
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 487 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 519
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

HSP 2 Score: 63.9 bits (154), Expect = 6.4e-09
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRET-KTANRIRRD 60
           M  +   D L     V+++VRK+G+KDKV V+K+ A+ LP GWI ++  T ++  + RRD
Sbjct: 1   MNGEGISDGLSAERKVEIRVRKNGRKDKVIVEKSAAQGLPEGWIKKLEITNRSGRKTRRD 60

Query: 61  SSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIE 103
             +IDP +    +S +D  RY+ +G +    H +R  ++++IE
Sbjct: 61  PFFIDPKSEYIFQSFKDASRYVETGNIG---HYARKLKESDIE 100

[Close]

BLAST of Cucsat.G647 vs. NCBI nr
Match: XP_011651145.1 (methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus])

HSP 1 Score: 1098 bits (2840), Expect = 0.0
Identity = 552/554 (99.64%), Postives = 552/554 (99.64%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRETKTANRIRRDS 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRETKTANRIRRDS
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRETKTANRIRRDS 60

Query: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120
           SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT
Sbjct: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120

Query: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDA 180
           IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDA
Sbjct: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDA 180

Query: 181 KGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240
           KGL QSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG
Sbjct: 181 KGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240

Query: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300
           LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS
Sbjct: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300

Query: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360
           PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG
Sbjct: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360

Query: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420
           PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE
Sbjct: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420

Query: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480
           NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN
Sbjct: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480

Query: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 540
           RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG
Sbjct: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 540

Query: 541 LHHQERNRNEFQRH 554
           LHHQERNRNEFQRH
Sbjct: 541 LHHQERNRNEFQRH 554

[Close]

BLAST of Cucsat.G647 vs. NCBI nr
Match: XP_011651143.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KGN57399.2 hypothetical protein Csa_010431 [Cucumis sativus])

HSP 1 Score: 1077 bits (2786), Expect = 0.0
Identity = 552/597 (92.46%), Postives = 552/597 (92.46%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -----------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120
                      VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV
Sbjct: 61  ESRTVKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP
Sbjct: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180

Query: 181 SEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVL 240
           SEMVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVL
Sbjct: 181 SEMVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVL 240

Query: 241 TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS 300
           TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS
Sbjct: 241 TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS 300

Query: 301 VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM 360
           VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM
Sbjct: 301 VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM 360

Query: 361 KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA 420
           KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA
Sbjct: 361 KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA 420

Query: 421 FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV 480
           FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV
Sbjct: 421 FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV 480

Query: 481 GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK 540
           GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK
Sbjct: 481 GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK 540

Query: 541 TNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 554
           TNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 541 TNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 597

[Close]

BLAST of Cucsat.G647 vs. NCBI nr
Match: XP_011651144.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 1043 bits (2697), Expect = 0.0
Identity = 524/526 (99.62%), Postives = 524/526 (99.62%), Query Frame = 0


Query: 29  VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR 88
           VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR
Sbjct: 36  VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR 95

Query: 89  LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP 148
           LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP
Sbjct: 96  LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP 155

Query: 149 NASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCP 208
           NASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTPKEFIQHKCP
Sbjct: 156 NASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCP 215

Query: 209 IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA 268
           IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA
Sbjct: 216 IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA 275

Query: 269 STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ 328
           STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ
Sbjct: 276 STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ 335

Query: 329 PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL 388
           PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL
Sbjct: 336 PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL 395

Query: 389 DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK 448
           DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK
Sbjct: 396 DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK 455

Query: 449 STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL 508
           STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL
Sbjct: 456 STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL 515

Query: 509 DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 554
           DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 516 DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of Cucsat.G647 vs. NCBI nr
Match: XP_004140849.1 (methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus])

HSP 1 Score: 1019 bits (2636), Expect = 0.0
Identity = 520/554 (93.86%), Postives = 520/554 (93.86%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRETKTANRIRRDS 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60

Query: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120
           SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT
Sbjct: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120

Query: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDA 180
           IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDA
Sbjct: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDA 180

Query: 181 KGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240
           KGL QSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG
Sbjct: 181 KGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240

Query: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300
           LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS
Sbjct: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300

Query: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360
           PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG
Sbjct: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360

Query: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420
           PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE
Sbjct: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420

Query: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480
           NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN
Sbjct: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480

Query: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 540
           RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG
Sbjct: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 522

Query: 541 LHHQERNRNEFQRH 554
           LHHQERNRNEFQRH
Sbjct: 541 LHHQERNRNEFQRH 522

[Close]

BLAST of Cucsat.G647 vs. NCBI nr
Match: TYK22932.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 949 bits (2454), Expect = 0.0
Identity = 501/603 (83.08%), Postives = 520/603 (86.24%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -----------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120
                      VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDP+NG+ALRSIRDV
Sbjct: 61  ESRTIKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPINGHALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARRQIIWSEN+SEP
Sbjct: 121 HRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARRQIIWSENSSEP 180

Query: 181 SEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIV 240
           SE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV
Sbjct: 181 SEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIV 240

Query: 241 LTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRAR 300
            T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRAR
Sbjct: 241 STTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRAR 300

Query: 301 SVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI- 360
           SVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI 
Sbjct: 301 SVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSIL 360

Query: 361 ---VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLT 420
              VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLT
Sbjct: 361 PKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLT 420

Query: 421 DPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPEL 480
           DPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PEL
Sbjct: 421 DPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPEL 480

Query: 481 PVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFS 540
           PV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFS
Sbjct: 481 PVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFS 540

Query: 541 TSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF 554
           TSKTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF
Sbjct: 541 TSKTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF 600

[Close]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL
Match: A0A0A0L6H4 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV=1)

HSP 1 Score: 1043 bits (2697), Expect = 0.0
Identity = 524/526 (99.62%), Postives = 524/526 (99.62%), Query Frame = 0


Query: 29  VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR 88
           VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR
Sbjct: 36  VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSR 95

Query: 89  LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP 148
           LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP
Sbjct: 96  LTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP 155

Query: 149 NASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCP 208
           NASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTPKEFIQHKCP
Sbjct: 156 NASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCP 215

Query: 209 IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA 268
           IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA
Sbjct: 216 IENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVA 275

Query: 269 STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ 328
           STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ
Sbjct: 276 STTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQ 335

Query: 329 PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL 388
           PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL
Sbjct: 336 PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVL 395

Query: 389 DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK 448
           DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK
Sbjct: 396 DASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLK 455

Query: 449 STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL 508
           STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL
Sbjct: 456 STLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGL 515

Query: 509 DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 554
           DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 516 DYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL
Match: A0A5D3DH45 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00100 PE=4 SV=1)

HSP 1 Score: 949 bits (2454), Expect = 0.0
Identity = 501/603 (83.08%), Postives = 520/603 (86.24%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -----------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120
                      VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDP+NG+ALRSIRDV
Sbjct: 61  ESRTIKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPINGHALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARRQIIWSEN+SEP
Sbjct: 121 HRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARRQIIWSENSSEP 180

Query: 181 SEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIV 240
           SE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV
Sbjct: 181 SEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIV 240

Query: 241 LTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRAR 300
            T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRAR
Sbjct: 241 STTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRAR 300

Query: 301 SVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI- 360
           SVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI 
Sbjct: 301 SVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSIL 360

Query: 361 ---VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLT 420
              VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLT
Sbjct: 361 PKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLT 420

Query: 421 DPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPEL 480
           DPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PEL
Sbjct: 421 DPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPEL 480

Query: 481 PVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFS 540
           PV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFS
Sbjct: 481 PVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFS 540

Query: 541 TSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF 554
           TSKTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF
Sbjct: 541 TSKTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEF 600

[Close]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL
Match: A0A5A7ST33 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00730 PE=4 SV=1)

HSP 1 Score: 945 bits (2443), Expect = 0.0
Identity = 501/614 (81.60%), Postives = 520/614 (84.69%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  ----------------------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPV 120
                                 VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDP+
Sbjct: 61  ESRTIKEPGNNVCQKNLPSTYNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPI 120

Query: 121 NGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARR 180
           NG+ALRSIRDVHRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARR
Sbjct: 121 NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARR 180

Query: 181 QIIWSENTSEPSEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQ 240
           QIIWSEN+SEPSE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL Q
Sbjct: 181 QIIWSENSSEPSEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQ 240

Query: 241 SDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEP 300
           SDGKNDISEIV T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEP
Sbjct: 241 SDGKNDISEIVSTTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEP 300

Query: 301 VLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGG 360
           VL+VKTGRRARSVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG 
Sbjct: 301 VLEVKTGRRARSVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGE 360

Query: 361 KAHICVDLSI----VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGP 420
           K H+CVDLSI    VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGP
Sbjct: 361 KEHLCVDLSILPKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGP 420

Query: 421 LLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPEN 480
           LLKLPMEDLLTDPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPEN
Sbjct: 421 LLKLPMEDLLTDPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPEN 480

Query: 481 KLNEKVACPELPVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 540
           KLNEKVA PELPV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N
Sbjct: 481 KLNEKVARPELPVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDN 540

Query: 541 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 554
            DIEDYF+QFSTSKTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTG
Sbjct: 541 PDIEDYFHQFSTSKTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTG 600

[Close]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL
Match: A0A6J1J2L9 (methyl-CpG-binding domain-containing protein 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482847 PE=4 SV=1)

HSP 1 Score: 665 bits (1717), Expect = 4.53e-234
Identity = 381/564 (67.55%), Postives = 423/564 (75.00%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNS++ LP GWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSENWLPLGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAINHPESE 60

Query: 61  -----------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120
                      VEVKKTIAK LP GWI EIR T+TANRIRRDS YI+PVNGNALRS+RDV
Sbjct: 61  ESRTVEQPENNVEVKKTIAKGLPPGWIREIRVTRTANRIRRDSFYINPVNGNALRSLRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNN--IEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTS 180
           HRYLTSGKVSRL +KSR+Q ++N  IEFQHD+ISS  VSKKE+L IGKA+RQIIWS+N+ 
Sbjct: 121 HRYLTSGKVSRLAYKSRSQSNSNSNIEFQHDDISSSSVSKKEMLAIGKAKRQIIWSDNSP 180

Query: 181 EPSEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISE 240
           EPSE+ D EA+FP A SVGE + F  P+ + G I AK  CSTP +AK   QS+GKN  SE
Sbjct: 181 EPSEIADDEAIFPKAASVGERMPFLKPNLTHGRIGAKLRCSTPEEAKEREQSEGKNSFSE 240

Query: 241 IVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRR 300
            V TP + I+HKC  ENGATK ESRKRQRK+ DINLP RASKRLAGLQAEPVL+ KT RR
Sbjct: 241 FVSTPDKSIRHKCTSENGATKIESRKRQRKSKDINLPCRASKRLAGLQAEPVLEAKTDRR 300

Query: 301 ARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLS 360
           A SVACEESDKQVASTTK  + QCPENPDVKH+T S  DP KI+T+ DS  K H  VDLS
Sbjct: 301 ACSVACEESDKQVASTTKWPS-QCPENPDVKHETRSIIDPPKIDTNLDSSRKEHSAVDLS 360

Query: 361 I----VMKMKSADAYEQQ-PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMED 420
           I    V KMKS DAYEQQ PK  S LP EDVLEKHVG VE ED+A VKKQGPLLKLPMED
Sbjct: 361 ILPEKVKKMKSEDAYEQQQPKCNSFLPSEDVLEKHVGQVESEDEAGVKKQGPLLKLPMED 420

Query: 421 LLTDPCIAFAVKTLTGDVLDASISSDAS---LTPNHVD-PFTPFTPNERCNSGPENKLNE 480
           LLTDPCIAFAVKTLTGDV DASISS+AS   L PN++D PF  FTP+ER N G ENKLNE
Sbjct: 421 LLTDPCIAFAVKTLTGDVFDASISSEASEASLMPNNIDRPFVAFTPSERRNLGSENKLNE 480

Query: 481 KVACPELPVARVGKVENN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDI 507
           K   PELPV RVGKVENN  VEKL+STLELPVGE+++DPCIEFAIKTLTGEIPL NN DI
Sbjct: 481 KSPSPELPVTRVGKVENNNIVEKLESTLELPVGEMWADPCIEFAIKTLTGEIPLVNNPDI 540

[Close]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL
Match: A0A6J1EAU0 (methyl-CpG-binding domain-containing protein 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430888 PE=4 SV=1)

HSP 1 Score: 654 bits (1688), Expect = 9.24e-230
Identity = 375/563 (66.61%), Postives = 420/563 (74.60%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNS++ LPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSENWLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTPAINHPESE 60

Query: 61  -----------VEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120
                      VEVKKTIAK LP GWI EIR T+TANRIRRDS YI+PVNGNALRS+RDV
Sbjct: 61  GSRTVEQPENNVEVKKTIAKGLPPGWIREIRVTRTANRIRRDSFYINPVNGNALRSLRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNN----IEFQHDEISSPVVSKKEVLTIGKARRQIIWSEN 180
           HRYLTSGKVSRL +KSR+Q ++N    IEFQHD+ISSP VS+KE+L IGKA+RQIIWS+N
Sbjct: 121 HRYLTSGKVSRLAYKSRSQSNSNSNSNIEFQHDDISSPSVSEKEMLAIGKAKRQIIWSDN 180

Query: 181 TSEPSEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDI 240
           + EPSE+VD EA+FP A SVGE + F  P+ + G I AK HCSTP +AK   QS+GKN+ 
Sbjct: 181 SPEPSEIVDDEAIFPKAASVGERMPFLKPNLTHGRIGAKLHCSTPEEAKEREQSEGKNNF 240

Query: 241 SEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTG 300
           S+ V TP +  QHKC  ENGATK ESRKRQRK+ DINL  RASKRLAGLQAEPVL+ KTG
Sbjct: 241 SDFVPTPDKSFQHKCTSENGATKIESRKRQRKSKDINLRCRASKRLAGLQAEPVLEAKTG 300

Query: 301 RRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVD 360
            +A S+ACEESDKQVASTTK  + Q PENPDVKH+T S  DP KI+T+ DS  K H  VD
Sbjct: 301 HQACSIACEESDKQVASTTKWPS-QSPENPDVKHETKSIIDPPKIDTNLDSSRKEHSAVD 360

Query: 361 LSI----VMKMKSADAYE-QQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPM 420
           LSI    V KMKS DAYE QQPK  S LP EDVLEKHVG VE +DKA+VKKQG LLKLPM
Sbjct: 361 LSILPEKVKKMKSEDAYELQQPKCNSFLPSEDVLEKHVGQVESDDKADVKKQGTLLKLPM 420

Query: 421 EDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVD-PFTPFTPNERCNSGPENKLNEK 480
           EDLLTDPCIAFAVKTLTGDV DASISS+ASL PN++D PF  FT  E      ENKLNEK
Sbjct: 421 EDLLTDPCIAFAVKTLTGDVFDASISSEASLMPNNIDRPFVAFTHLES-----ENKLNEK 480

Query: 481 VACPELPVARVGKVENN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIE 507
           +  PELPV RVGKVENN  VEKL STL+LPVGEI++DPCIEFAIKTLTGEIPL NN DIE
Sbjct: 481 LPSPELPVTRVGKVENNNIVEKLDSTLKLPVGEIWADPCIEFAIKTLTGEIPLVNNPDIE 540

[Close]

BLAST of Cucsat.G647 vs. TAIR 10
Match: AT5G52230.1 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 6.4e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 367 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 426
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 427 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 486
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 487 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 519
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

HSP 2 Score: 63.9 bits (154), Expect = 4.6e-10
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRET-KTANRIRRD 60
           M  +   D L     V+++VRK+G+KDKV V+K+ A+ LP GWI ++  T ++  + RRD
Sbjct: 1   MNGEGISDGLSAERKVEIRVRKNGRKDKVIVEKSAAQGLPEGWIKKLEITNRSGRKTRRD 60

Query: 61  SSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIE 103
             +IDP +    +S +D  RY+ +G +    H +R  ++++IE
Sbjct: 61  PFFIDPKSEYIFQSFKDASRYVETGNIG---HYARKLKESDIE 100

[Close]

BLAST of Cucsat.G647 vs. TAIR 10
Match: AT5G52230.2 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 6.4e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 367 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 426
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 427 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 486
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 487 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 519
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

HSP 2 Score: 63.9 bits (154), Expect = 4.6e-10
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRET-KTANRIRRD 60
           M  +   D L     V+++VRK+G+KDKV V+K+ A+ LP GWI ++  T ++  + RRD
Sbjct: 1   MNGEGISDGLSAERKVEIRVRKNGRKDKVIVEKSAAQGLPEGWIKKLEITNRSGRKTRRD 60

Query: 61  SSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIE 103
             +IDP +    +S +D  RY+ +G +    H +R  ++++IE
Sbjct: 61  PFFIDPKSEYIFQSFKDASRYVETGNIG---HYARKLKESDIE 100

The following BLAST results are available for this feature:

BLAST of Cucsat.G647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTJ8	9.0e-11	35.44	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cucsat.G647 vs. NCBI nr


Match Name	Identity	Description
XP_011651145.1	99.64	methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus]	[more]
XP_011651143.1	92.46	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KG...	[more]
XP_011651144.1	99.62	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus]	[more]
XP_004140849.1	93.86	methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus]	[more]
TYK22932.1	83.08	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. ma...	[more]

BLAST of Cucsat.G647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6H4	0.0	99.62	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV...	[more]
A0A5D3DH45	0.0	83.08	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A5A7ST33	0.0	81.60	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A6J1J2L9	4.53e-234	67.55	methyl-CpG-binding domain-containing protein 13-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1EAU0	9.24e-230	66.61	methyl-CpG-binding domain-containing protein 13-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of Cucsat.G647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52230.1	6.4e-12	35.44	methyl-CPG-binding domain protein 13	[more]
AT5G52230.2	6.4e-12	35.44	methyl-CPG-binding domain protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..250
None	No IPR available	PANTHER	PTHR34067:SF15	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13	coord: 7..494
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	OS04G0193200 PROTEIN	coord: 7..494

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G647.T8	Cucsat.G647.T8	mRNA
Cucsat.G647.T5	Cucsat.G647.T5	mRNA
Cucsat.G647.T4	Cucsat.G647.T4	mRNA
Cucsat.G647.T3	Cucsat.G647.T3	mRNA
Cucsat.G647.T2	Cucsat.G647.T2	mRNA
Cucsat.G647.T21	Cucsat.G647.T21	mRNA
Cucsat.G647.T22	Cucsat.G647.T22	mRNA
Cucsat.G647.T20	Cucsat.G647.T20	mRNA
Cucsat.G647.T9	Cucsat.G647.T9	mRNA
Cucsat.G647.T7	Cucsat.G647.T7	mRNA
Cucsat.G647.T6	Cucsat.G647.T6	mRNA
Cucsat.G647.T1	Cucsat.G647.T1	mRNA
Cucsat.G647.T13	Cucsat.G647.T13	mRNA
Cucsat.G647.T12	Cucsat.G647.T12	mRNA
Cucsat.G647.T10	Cucsat.G647.T10	mRNA
Cucsat.G647.T17	Cucsat.G647.T17	mRNA
Cucsat.G647.T16	Cucsat.G647.T16	mRNA
Cucsat.G647.T19	Cucsat.G647.T19	mRNA
Cucsat.G647.T18	Cucsat.G647.T18	mRNA
Cucsat.G647.T15	Cucsat.G647.T15	mRNA
Cucsat.G647.T11	Cucsat.G647.T11	mRNA
Cucsat.G647.T14	Cucsat.G647.T14	mRNA
Cucsat.G647.T23	Cucsat.G647.T23	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding