Cucsat.G647.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G647.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Methyl-CpG-binding domain-containing protein 13 isoform X1
Location	ctg1: 12649835 .. 12654236 (-)
RNA-Seq Expression	Cucsat.G647.T5
Synteny	Cucsat.G647.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGAGTGGCAAAAAGGATAAGGTACTGATTTTTCTTGTCAATGGGTTTTCTTTCCCTTTGATTTCTTTTTACTTGCATTTCGTAGATCTTTAGCTGTTTTGTAAGTTTTATGTTCTACGTTGCTGTTACAACTAGCTCTTGATTTGATTTCACTCTCCTGCTCAACTTGTGTGCTGTTGGTGTATACGGAAAATGTGTTCTTTTTGCCTTGTTAGTTAGTGGTGGGAATGCAACCGAAGTCCCATAGATAAGGCCTAAGGGACGATAATGAGTATATCTTCGTTATTATGAGGAGGCCTTTTGATTTCATTAGTACGAGGCCTTTGGAGTGTTGCTCACCTAGGTGTTAGAAACTATGACTTCTGATGGGAAATTTTGGCTGTGTAGACAGTTAAAAGAAAGGAGATAGATGACTAATATTTGGGGAGAAAGTGTGTTGTCTTGTGTATGCTTCTGATATTGGACCTATTAGCTAAAACTTTCCTATGACTTTCTGATCTGAGTAAATGACTTGCCTTCTTCAGCTCCTATGGCTATGATTCCCTCATATAATTTTTGGCCAAGTTTTCCCATCAGTTTAAAGTTTCTATTTGCATTGTGAATGAACTATTTTTTATCTCTTGTTAGGCCCTTTCTGTTTAGGCTTGTGTGAAACAGCAAACTGTAATGTCATTTTTCATTCAAAAGATGCAAGATGCAACTAAAGCTTGCGTTAGTGTAACTTCCATTAACATCTTAACAAAAGAACATGTTTCTTCCTCCTAATGTCTTCTGGTTATTTGCTTTTGGTATTCAAATATGTTTTTTTTTTTTTTTTTTGATAAGAGAAAAAGAAAAAGGTATTCAAATATGTATTTGATAACCATGAATCCTATTATCATGTGGAACGTTAATACGAAAAGGAAGTCTGTATAAAGATCAGATAACTGATGGTGGCCAATAATGTTCTGTTCATTTTAAGATAAATAATTAGTTGGATCTTTGTGACTGATTCTAATGTTGCAGTATTATTTTGAACCCTCAAGTCAAATGAGATTTAATTCTAGGGCAGAGGTGTTTAGATACCTCAAAACTGCAGCTATCTGTCATCCTGAATCTGAAGAGAGCAGAACCGTCAAGGAACCAGGGAACAATGTCTGTCAAAAAAATCTACCCTCTACTCTATTTTTTGTGTTCCAATTCGCTGGTCTTTTGGATTATGAACTTTATTGATTTTTCTTTAAAAACTTCTATTATTCAAGCAATCTAGGTGGAAGTTAAGAAGACTATAGCAAAAGATTTACCTACTGGATGGATCGGAGAAATCAGAGAAACGAAGACTGCTAACAGAATAAGAAGAGATTCAGTAATTTATCATCTATTTCTATTTGTTGTGTCCTTTGGAATTTGGATATACTATCTAACCATGCACTCTGTTTCATTTATATATTTAGTGCCTTAAAGCTAGTGACATGCTAAACAACATGAATGTTAACAAATGAACTTCTGTTTGCAGTCTTACATTGATCCAGTAAATGGAAATGCACTTCGTTCAATAAGGGATGTACATCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAACACATAAATCAAGGAACCAGAGAGACAACAACATTGAGTTTCAACATGATGAAATCTCTGTAAGTGTTCTTGAGGTACTCAAAGTTAAAAATGATTAGGGTCTCAAGAGTTTTCATCAGTTGGTTCAACTATCACTTAATGAAATAAGTGTAGTATTTTGGAGTGATGCCCCTCGTCGGTTCTCTCTCTCCAATGTGGGTCCTTGCTATTCACATAATTCAATATTTATGCCCTCATCGATTCTCTCTATGTATCAACGGCTGAAATTTGGGTGAATTCATCTCATCTAAAATATGTACATAAATTTTGGACTTCAATCAGGGATCTCAAATTGATGGAACCCATAAATAATATTCTAGTAACTACTTGGCAATCAAGGACAATTTGAGAGACTGAAATGTCATCAAGATTACACTGAAATGTTAAAACCAATATTGAATTAGGATCGTAAAACATGATAACAGTGGAGAATAGGGTTGGGGGGTTGGTTTGAAAAGGGTGGGAAGGAAATGTAATAGGGATTACACACCGGGCCCAAAGCCCTCATTCCAAATGCAGGTTTGAAATTACAAACCATTACAAACTCATTATATTTCAGCCTCCCAAACAGACCCTAAGTATGGTTGTATTACAATAGCGCAAGGTTTCTTTCTCTCTCGAGAATTAGACTGTAGAGTTGAGATTGGAAACAACTTGGTTACTTGCTTGTCCCTAAACATGGATAGATAAGTAAATAACATCATTTCCTTCTTAATTATTCTGTTTCTTTGACTAGTTGCACTAAACATTCCTGCTTCTGAAGTATTTTAAACCGGAAGTGCAAAAAGAAAACTGTTTCAAACTTAAGTTGATTATTCTTACCTTAGCACTAAATTTCTTATTTCCTTCTCTATTAGTCACCTGTTGTCTCCAAGAAAGAGGTGCTAACTATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAACACATCAGAACCCAGTGAAATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGTAGTGTTCTGAACATGCAGCTTTAGTGTGACATACTTAATTTGACAAACACCCCATTCTTTCCTATCTTCATCACTTATCTCTGTGTAAAGTAGAGGTTTGTTTAGAGTGGAAGGTTCATGCTTTTTAAACAATCTAGCTAAAGATTTCAGTTTCTGTTCTAGAAAAGGGTTTTTTCTTCCTTTCCTTAATTTTTCTGAAAAAATTGAAATGAAAATGTTGAGTGCTTCTGCCAATTGAAGATTATATCTAATGTGAATTTTTAAATTACCGCAGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAATACCAACTTCATAAAATGTACAGTTTTGGTTGGCAGCATAGAAAAGAAAAAAAAAAAGTTTTTCTTCTTGTGTACCTTTCCCTTTTTCATGTTATATTTACTAGTTTTTCATGTTATATTTACTAGTTTTGTTAGTTGTGGTCAGGCAACCCTCTTTTGCCCAAGTTTTGTACCTTATCACATGGGCAACTTAATGTGCTGTATGCTACAAACAGGACTTGATTTTGACTTAGTTCTAACTTACCTTCTGTTAGCTGACCTAGTATGGGTAATTTAATTTGCAGTTCAATCTAGATTAGTGTATCTT

Coding sequence (CDS)

ATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAA

Protein sequence

MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH

Homology

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy Swiss-Prot
Match: Q9LTJ8 (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=MBD13 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.7e-11
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 228 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 287
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 288 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 347
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 348 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 380
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

[Close]

BLAST of Cucsat.G647.T5 vs. NCBI nr
Match: XP_004140849.1 (methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus])

HSP 1 Score: 828 bits (2140), Expect = 3.90e-301
Identity = 413/415 (99.52%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTP 60
           MVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTP
Sbjct: 108 MVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTP 167

Query: 61  KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 120
           KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA
Sbjct: 168 KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 227

Query: 121 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 180
           CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM
Sbjct: 228 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 287

Query: 181 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 240
           KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA
Sbjct: 288 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 347

Query: 241 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 300
           VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK
Sbjct: 348 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 407

Query: 301 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 360
           VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN
Sbjct: 408 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 467

Query: 361 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 415
           ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 468 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 522

[Close]

BLAST of Cucsat.G647.T5 vs. NCBI nr
Match: XP_011651145.1 (methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus])

HSP 1 Score: 828 bits (2140), Expect = 1.28e-300
Identity = 413/415 (99.52%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTP 60
           MVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTP
Sbjct: 140 MVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTP 199

Query: 61  KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 120
           KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA
Sbjct: 200 KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 259

Query: 121 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 180
           CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM
Sbjct: 260 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 319

Query: 181 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 240
           KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA
Sbjct: 320 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 379

Query: 241 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 300
           VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK
Sbjct: 380 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 439

Query: 301 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 360
           VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN
Sbjct: 440 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 499

Query: 361 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 415
           ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 500 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 554

[Close]

BLAST of Cucsat.G647.T5 vs. NCBI nr
Match: XP_011651144.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 828 bits (2140), Expect = 1.66e-300
Identity = 413/415 (99.52%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTP 60
           MVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTP
Sbjct: 147 MVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTP 206

Query: 61  KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 120
           KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA
Sbjct: 207 KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 266

Query: 121 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 180
           CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM
Sbjct: 267 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 326

Query: 181 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 240
           KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA
Sbjct: 327 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 386

Query: 241 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 300
           VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK
Sbjct: 387 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 446

Query: 301 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 360
           VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN
Sbjct: 447 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 506

Query: 361 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 415
           ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 507 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of Cucsat.G647.T5 vs. NCBI nr
Match: XP_011651143.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KGN57399.2 hypothetical protein Csa_010431 [Cucumis sativus])

HSP 1 Score: 828 bits (2140), Expect = 6.27e-300
Identity = 413/415 (99.52%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTP 60
           MVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTP
Sbjct: 183 MVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTP 242

Query: 61  KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 120
           KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA
Sbjct: 243 KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 302

Query: 121 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 180
           CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM
Sbjct: 303 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 362

Query: 181 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 240
           KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA
Sbjct: 363 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 422

Query: 241 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 300
           VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK
Sbjct: 423 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 482

Query: 301 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 360
           VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN
Sbjct: 483 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 542

Query: 361 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 415
           ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 543 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 597

[Close]

BLAST of Cucsat.G647.T5 vs. NCBI nr
Match: TYK22932.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 714 bits (1843), Expect = 1.21e-254
Identity = 370/421 (87.89%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLT 60
           +VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV T
Sbjct: 183 IVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIVST 242

Query: 61  PKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSV 120
             +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRARSV
Sbjct: 243 TDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRARSV 302

Query: 121 ACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI--- 180
           ACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI   
Sbjct: 303 ACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSILPK 362

Query: 181 -VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDP 240
            VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLTDP
Sbjct: 363 NVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLTDP 422

Query: 241 CIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPV 300
           CIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PELPV
Sbjct: 423 CIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPELPV 482

Query: 301 ARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTS 360
            RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFSTS
Sbjct: 483 TRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFSTS 542

Query: 361 KTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 415
           KTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR
Sbjct: 543 KTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 602

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL
Match: A0A0A0L6H4 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV=1)

HSP 1 Score: 828 bits (2140), Expect = 8.05e-301
Identity = 413/415 (99.52%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTP 60
           MVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTP
Sbjct: 147 MVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTP 206

Query: 61  KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 120
           KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA
Sbjct: 207 KEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVA 266

Query: 121 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 180
           CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM
Sbjct: 267 CEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKM 326

Query: 181 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 240
           KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA
Sbjct: 327 KSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFA 386

Query: 241 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 300
           VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK
Sbjct: 387 VKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGK 446

Query: 301 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 360
           VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN
Sbjct: 447 VENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 506

Query: 361 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 415
           ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 507 ENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL
Match: A0A5D3DH45 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00100 PE=4 SV=1)

HSP 1 Score: 714 bits (1843), Expect = 5.85e-255
Identity = 370/421 (87.89%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLT 60
           +VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV T
Sbjct: 183 IVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIVST 242

Query: 61  PKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSV 120
             +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRARSV
Sbjct: 243 TDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRARSV 302

Query: 121 ACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI--- 180
           ACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI   
Sbjct: 303 ACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSILPK 362

Query: 181 -VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDP 240
            VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLTDP
Sbjct: 363 NVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLTDP 422

Query: 241 CIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPV 300
           CIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PELPV
Sbjct: 423 CIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPELPV 482

Query: 301 ARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTS 360
            RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFSTS
Sbjct: 483 TRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFSTS 542

Query: 361 KTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 415
           KTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR
Sbjct: 543 KTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 602

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL
Match: A0A5A7ST33 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00730 PE=4 SV=1)

HSP 1 Score: 714 bits (1843), Expect = 8.66e-255
Identity = 370/421 (87.89%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLT 60
           +VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV T
Sbjct: 194 IVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIVST 253

Query: 61  PKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSV 120
             +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRARSV
Sbjct: 254 TDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRARSV 313

Query: 121 ACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI--- 180
           ACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI   
Sbjct: 314 ACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSILPK 373

Query: 181 -VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDP 240
            VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLTDP
Sbjct: 374 NVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLTDP 433

Query: 241 CIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPV 300
           CIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PELPV
Sbjct: 434 CIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPELPV 493

Query: 301 ARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTS 360
            RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFSTS
Sbjct: 494 TRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFSTS 553

Query: 361 KTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 415
           KTEKTN NASDQPGLDYFCKT+VSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR
Sbjct: 554 KTEKTNANASDQPGLDYFCKTSVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQR 613

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL
Match: A0A6J1J920 (methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482847 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 7.95e-163
Identity = 269/380 (70.79%), Postives = 297/380 (78.16%), Query Frame = 0


Query: 1   MVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLT 60
           + D EA+FP A SVGE + F  P+ + G I AK  CSTP +AK   QS+GKN  SE V T
Sbjct: 110 IADDEAIFPKAASVGERMPFLKPNLTHGRIGAKLRCSTPEEAKEREQSEGKNSFSEFVST 169

Query: 61  PKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSV 120
           P + I+HKC  ENGATK ESRKRQRK+ DINLP RASKRLAGLQAEPVL+ KT RRA SV
Sbjct: 170 PDKSIRHKCTSENGATKIESRKRQRKSKDINLPCRASKRLAGLQAEPVLEAKTDRRACSV 229

Query: 121 ACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI--- 180
           ACEESDKQVASTTK  + QCPENPDVKH+T S  DP KI+T+ DS  K H  VDLSI   
Sbjct: 230 ACEESDKQVASTTKWPS-QCPENPDVKHETRSIIDPPKIDTNLDSSRKEHSAVDLSILPE 289

Query: 181 -VMKMKSADAYEQQ-PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTD 240
            V KMKS DAYEQQ PK  S LP EDVLEKHVG VE ED+A VKKQGPLLKLPMEDLLTD
Sbjct: 290 KVKKMKSEDAYEQQQPKCNSFLPSEDVLEKHVGQVESEDEAGVKKQGPLLKLPMEDLLTD 349

Query: 241 PCIAFAVKTLTGDVLDASISSDAS---LTPNHVD-PFTPFTPNERCNSGPENKLNEKVAC 300
           PCIAFAVKTLTGDV DASISS+AS   L PN++D PF  FTP+ER N G ENKLNEK   
Sbjct: 350 PCIAFAVKTLTGDVFDASISSEASEASLMPNNIDRPFVAFTPSERRNLGSENKLNEKSPS 409

Query: 301 PELPVARVGKVENN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYF 360
           PELPV RVGKVENN  VEKL+STLELPVGE+++DPCIEFAIKTLTGEIPL NN DIEDYF
Sbjct: 410 PELPVTRVGKVENNNIVEKLESTLELPVGEMWADPCIEFAIKTLTGEIPLVNNPDIEDYF 469

Query: 361 YQFSTSKTEKTNENASDQPG 368
           +QF+ SKT+ TN NAS+  G
Sbjct: 470 HQFAPSKTKGTNANASNHVG 488

[Close]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL
Match: A0A6J1JB13 (methyl-CpG-binding domain-containing protein 13-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482847 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 2.94e-162
Identity = 269/380 (70.79%), Postives = 297/380 (78.16%), Query Frame = 0


Query: 1   MVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLT 60
           + D EA+FP A SVGE + F  P+ + G I AK  CSTP +AK   QS+GKN  SE V T
Sbjct: 149 IADDEAIFPKAASVGERMPFLKPNLTHGRIGAKLRCSTPEEAKEREQSEGKNSFSEFVST 208

Query: 61  PKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSV 120
           P + I+HKC  ENGATK ESRKRQRK+ DINLP RASKRLAGLQAEPVL+ KT RRA SV
Sbjct: 209 PDKSIRHKCTSENGATKIESRKRQRKSKDINLPCRASKRLAGLQAEPVLEAKTDRRACSV 268

Query: 121 ACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI--- 180
           ACEESDKQVASTTK  + QCPENPDVKH+T S  DP KI+T+ DS  K H  VDLSI   
Sbjct: 269 ACEESDKQVASTTKWPS-QCPENPDVKHETRSIIDPPKIDTNLDSSRKEHSAVDLSILPE 328

Query: 181 -VMKMKSADAYEQQ-PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTD 240
            V KMKS DAYEQQ PK  S LP EDVLEKHVG VE ED+A VKKQGPLLKLPMEDLLTD
Sbjct: 329 KVKKMKSEDAYEQQQPKCNSFLPSEDVLEKHVGQVESEDEAGVKKQGPLLKLPMEDLLTD 388

Query: 241 PCIAFAVKTLTGDVLDASISSDAS---LTPNHVD-PFTPFTPNERCNSGPENKLNEKVAC 300
           PCIAFAVKTLTGDV DASISS+AS   L PN++D PF  FTP+ER N G ENKLNEK   
Sbjct: 389 PCIAFAVKTLTGDVFDASISSEASEASLMPNNIDRPFVAFTPSERRNLGSENKLNEKSPS 448

Query: 301 PELPVARVGKVENN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYF 360
           PELPV RVGKVENN  VEKL+STLELPVGE+++DPCIEFAIKTLTGEIPL NN DIEDYF
Sbjct: 449 PELPVTRVGKVENNNIVEKLESTLELPVGEMWADPCIEFAIKTLTGEIPLVNNPDIEDYF 508

Query: 361 YQFSTSKTEKTNENASDQPG 368
           +QF+ SKT+ TN NAS+  G
Sbjct: 509 HQFAPSKTKGTNANASNHVG 527

[Close]

BLAST of Cucsat.G647.T5 vs. TAIR 10
Match: AT5G52230.1 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 4.8e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 228 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 287
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 288 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 347
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 348 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 380
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

[Close]

BLAST of Cucsat.G647.T5 vs. TAIR 10
Match: AT5G52230.2 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 4.8e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 228 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 287
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 288 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 347
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 348 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 380
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

The following BLAST results are available for this feature:

BLAST of Cucsat.G647.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTJ8	6.7e-11	35.44	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cucsat.G647.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140849.1	3.90e-301	99.52	methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus]	[more]
XP_011651145.1	1.28e-300	99.52	methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus]	[more]
XP_011651144.1	1.66e-300	99.52	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus]	[more]
XP_011651143.1	6.27e-300	99.52	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KG...	[more]
TYK22932.1	1.21e-254	87.89	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. ma...	[more]

BLAST of Cucsat.G647.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6H4	8.05e-301	99.52	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV...	[more]
A0A5D3DH45	5.85e-255	87.89	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A5A7ST33	8.66e-255	87.89	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A6J1J920	7.95e-163	70.79	methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita max...	[more]
A0A6J1JB13	2.94e-162	70.79	methyl-CpG-binding domain-containing protein 13-like isoform X3 OS=Cucurbita max...	[more]

BLAST of Cucsat.G647.T5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52230.1	4.8e-12	35.44	methyl-CPG-binding domain protein 13	[more]
AT5G52230.2	4.8e-12	35.44	methyl-CPG-binding domain protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
None	No IPR available	PANTHER	PTHR34067:SF15	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13	coord: 30..409
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	OS04G0193200 PROTEIN	coord: 30..409

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G647	Cucsat.G647	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G647.T5.E1	Cucsat.G647.T5.E1	exon
Cucsat.G647.T5.E2	Cucsat.G647.T5.E2	exon
Cucsat.G647.T5.E3	Cucsat.G647.T5.E3	exon
Cucsat.G647.T5.E4	Cucsat.G647.T5.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G647.T5.C2	Cucsat.G647.T5.C2	CDS
Cucsat.G647.T5.C1	Cucsat.G647.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G647.T5	Cucsat.G647.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding