Cucsat.G6345 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGACTCGTCGACAATAAAGATATTTCACATACCAACTTTGCGTGAGGAGCAAGTCCTGAGAAGAGAGCTAACATATTAACTTCATATAAACTAATCAAAGAATGTTTCCCTATATTCGATTAAAGCTACTGTCTAATCCCTTTCCCACCAAGAATTTGGAACACCCATTGCTTTGATTTTGAGGTATCATACGCCTTCTCTTTTTTCTGCACTCTGTTTTTCTTCTGCTCTTTGAATTTTCTTCAGTTATGAATCAGTAGGAATGTGAATACGTTGAAATTTTTTCATGGGTTTCTTTTTTTCTCTTTGTTGGAAGCCTTTTTTGCATTGGGCAAAGAACAGCCCCGCCATGCACGGAGGGGAGTTCGATTATGGAGTGAAGGGTGTGGTGGAGGAAGAACAGAAACCTGCTGGTGATGAGCTGATAGTGGATTATTATGATTATCTACACCAAATATTCGATGAAATGCCTGTTCCAGTTCGACAATTTTCTTTTGTCAAAGTTTTGCCACTTGAGAATCCTGAAGTATATGCCATGATCAAGAAAGCTGAAGAGACGATTGGAAAGATGAATCAAGATCAAGTTCTGTTAGCTCAGAAGATAAGGAAAAGAGTTGTATGTGAAAAGAAACCGTAGTCATTCCTAATCCTGGTTGAACATTATAGTCAATTCTCCTTGTTTGGTTCTAGCCTCTTCCAATAAATAGATCATTAGAATTTTCTATAACTTGAAAAGTTAGTTTTTTCTTTGTTGAAGTGATGTTGATTAATGATCTATAAGACATTGATTTTCATAAGTTTTCGTTGTAGATGGATGGCGATGATGTGAGGGCAAAATTATGCATGATAAATTACTATGATAACTGTGGAATTTCCCCAAATTGGGAGAAAGAGAGATTGGATACCCTGCATCTATCACTAGATAAACTGACTTTTGCAAACAGTGCATACAAAGAGAAATCGATTAACTCGTGCTTGTCGGGAGGGGAAGTCGATAAGCAGGTATGGCCTATTCAACTCAATTTCTTTTTGTATTCATTGTGACATCTTAGAGTTTCTTGATCTTCATTTTATTAATGTGTGTGTATACATTTGTTGATGTTTGAGCAGAAACTGTCATTTTCGATAGTACATGGCCGTAAAAACATGGCTGATGAGAGAAATCTATTAAGGGAGATCAAAGCAAGCCAAGGGAAGGATGATGGCATGACAGTAGAAGAACTCTATGCTCCTGTAATATTTAATATTAAGCATTAATCTTCAACTTTTGGTTCAATTCCTGTGATTTTTATTACTTGTATGAATTATCATATCTCTAAAGCCTATTGGTTTATGCAAACAGATTCAACGCCTAAAAGAGCAAATGTGCTACAACTATAGGGATTGTGCGAAAGCCGCTGATGATGCTGCTCGTAATAAAACCATTCTCAAAGACATCAAACAACATCAAATTGCTAGAGAGAAAGCTATTGCTGATGCCGTTGTGAATGGAAAATTGTGGAACTCCTTAGGTTCACAAAAAGCCATACGAGCAGAGGTAAGAGCCATAAACAAAGGTTAAATTAGACAAAGCACACCTAAACTTTGGGGCATGTTTCAATTACTTTTAGCATTTTTTTTTCATTTTAATCCTTGAACTTAGAACTTATTCAGAAAGTACCCCTTGGAGAGTTTTTTCTTCTTCTTTTTTTCCCATAAAATGGAGGGTTATGATATTACGAATTGGAAGGATAGCTGATTATAAAATTTGAAAAACCTACATTACATCCTTTACGACTTAGTTCGAACTATCTTGATGCCTAAGATCAGTTCTACAATTCAGTTCAACTCAAAAATACCATGAACATCATTTACATCATCACTCACAAACTCTATTCTTAAATATCAACTCTAACATCAATTTACATGAATGATATTGTAAATGATGTCAGGTAAGTATTTCAATTTTCAAACACCATCTTTAGAGACAACTTTCCTGATATCATTTTTGTGGGAAAACTTTCTAAGGGTATTTATTGGTACAGTTTCAAAGGTCAAGGTTTAAAATGAAACGAGCCTACCCAAAAGTTCAAGGGTATTTTTTGTATAATCTAGTCTAATGGAAATGTTAGAGATTTATCATATTCTATAAGTTGTAATTCATACTTGTGCAATGTTTCTTGTTAATGAACAGTTGCAGGAGGAACACAGCTACGAATACAACTCAGGTCAGGTTGAGCATAATCACAAAAAAATAAATATCAAAATTATAAAGTTAAAAAAAAAGTTGGAGAAGATAGAAAAGGATATAAGTTCTCTGCAGAAACGCTTGAAAGATACCAATCGAAAAAAGGGCGCGGCATACAGCATCATTCTTAAGCTGAAGAAGCAATACGAAGAGGAGGTATATATGATAAACTGATCACATACAAACTGAATATTTTATTGCTTAGTTATATTAAATTTGCACTCAGTTCGTTCATCAAATTATAAGTCGGTAACCAATCCGAGCATAGCTTAGTGGATTAAGGCATTAATTACCAATCGAAAGTTCAATTTTGATCTTCTACCATTTGCTTGTTGAACCAAATAATTAAAAGAAAGTTTAGAAGTATGCCTTTGTTCCTCTCTTCACTTGCAAAGTACTGCGAAGTAAGTGAAAATTTTTGTCGAAAAGAAGAAAGGTTTGTGTTGTGACATTGTTATGATATCTTATGTCTGTTAGACACCAAGATTCTTTCTTTTTTCATAGTTAGTGCTTGATTGTAATCATTGTGCAGTTGATTAAATAAGTTAATTTAGTTTTTAGTTTTTTATTTTTGAAACTTATGTTTGTTTATTCATATTTCCTACTATAATTTTCAAATTTCTGGAAGTAACATGTGGTTTTTTAGTCAAATCAAAAACAAAGTTTTTAAGAACCGTTTCTTCTGTTTTTCAAAACTTGACCAATTTTAAAAGAATTTTTGAAAAGTAGGTAATAAAAACAAAGAAACTAAGTGGGAGAGACTTAATATCCAAGATCCAAAAACCGTAGTAATATTTTGTTAGCTTTTCTTAAACTAGAGATCTGATATATTCTGTGGTATTTTATATGTTAAGAACGCTGGTTCCTCTCCCAAAGAAAGTTGAAGAACTTGCTGAGAAGAAAGCATTGCAGCACTTCAAGAATTATTTCGAGCACAGGTTTTTCATTAGCTTGCACATGCTATTACAACTTGAGTTCTAAGAGCTTGAGAACTGACTCTTCTTTTTTCTTTCGCCCTCTAACAAACAGGTTGAAAAGGTTATACAACATAACAATTGCCTCAGATTTCAAAAGTGATTAGGAACAGAGAGTCGATGTCTTTGTTAAAAGAGGTGCTTTCCTTAACTAGATTGCAATGGTTGATGAAAGATGTGGAAGGTCATTGATTTAAATCATGGTTGACTAAAGATGTAACGTATGAGTTTCTTTGGTAACCAAATATAGTAGCGTCAAGTGGTTGTCTGATGAGATTAGTCAAGTTCTAGCTCTCATAGATTAAAAAGTATATACATGTCAACAAAATTTCTCAGCTTGTGTCCTTGTAAAATTTATTGTTCACTTGCACATATTACATATGCTTGAAGATTTTGTTTGGTTATTTGTTGCTCAAATGTTTCCATTTCTGTAAGTATTATTCAAAAATATCAATGTG ATGGATGGCGATGATGTGAGGGCAAAATTATGCATGATAAATTACTATGATAACTGTGGAATTTCCCCAAATTGGGAGAAAGAGAGATTGGATACCCTGCATCTATCACTAGATAAACTGACTTTTGCAAACAGTGCATACAAAGAGAAATCGATTAACTCGTGCTTGTCGGGAGGGGAAGTCGATAAGCAGAAACTGTCATTTTCGATAGTACATGGCCGTAAAAACATGGCTGATGAGAGAAATCTATTAAGGGAGATCAAAGCAAGCCAAGGGAAGGATGATGGCATGACAGTAGAAGAACTCTATGCTCCTATTCAACGCCTAAAAGAGCAAATGTGCTACAACTATAGGGATTGTGCGAAAGCCGCTGATGATGCTGCTCGTAATAAAACCATTCTCAAAGACATCAAACAACATCAAATTGCTAGAGAGAAAGCTATTGCTGATGCCGTTGTGAATGGAAAATTGTGGAACTCCTTAGGTTCACAAAAAGCCATACGAGCAGAGTTGCAGGAGGAACACAGCTACGAATACAACTCAGGTCAGGTTGAGCATAATCACAAAAAAATAAATATCAAAATTATAAAGTTAAAAAAAAAGTTGGAGAAGATAGAAAAGGATATAAGTTCTCTGCAGAAACGCTTGAAAGATACCAATCGAAAAAAGGGCGCGGCATACAGCATCATTCTTAAGCTGAAGAAGCAATACGAAGAGGAGAACGCTGGTTCCTCTCCCAAAGAAAGTTGA MDGDDVRAKLCMINYYDNCGISPNWEKERLDTLHLSLDKLTFANSAYKEKSINSCLSGGEVDKQKLSFSIVHGRKNMADERNLLREIKASQGKDDGMTVEELYAPIQRLKEQMCYNYRDCAKAADDAARNKTILKDIKQHQIAREKAIADAVVNGKLWNSLGSQKAIRAELQEEHSYEYNSGQVEHNHKKINIKIIKLKKKLEKIEKDISSLQKRLKDTNRKKGAAYSIILKLKKQYEEENAGSSPKES Homology
BLAST of Cucsat.G6345 vs. NCBI nr
Match: XP_031742609.1 (uncharacterized protein LOC105435772 [Cucumis sativus] >KAE8646760.1 hypothetical protein Csa_004820 [Cucumis sativus]) HSP 1 Score: 489 bits (1258), Expect = 1.21e-172 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Cucsat.G6345 vs. NCBI nr
Match: XP_022155411.1 (proton pump-interactor BIP103-like isoform X2 [Momordica charantia]) HSP 1 Score: 312 bits (800), Expect = 1.65e-102 Identity = 167/245 (68.16%), Postives = 198/245 (80.82%), Query Frame = 0
BLAST of Cucsat.G6345 vs. NCBI nr
Match: XP_022155410.1 (proton pump-interactor BIP103-like isoform X1 [Momordica charantia]) HSP 1 Score: 312 bits (800), Expect = 8.67e-102 Identity = 167/245 (68.16%), Postives = 198/245 (80.82%), Query Frame = 0
BLAST of Cucsat.G6345 vs. NCBI nr
Match: KAA0039823.1 (proton pump-interactor 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 303 bits (775), Expect = 1.49e-99 Identity = 160/186 (86.02%), Postives = 168/186 (90.32%), Query Frame = 0
BLAST of Cucsat.G6345 vs. NCBI nr
Match: XP_016902472.1 (PREDICTED: uncharacterized protein LOC103498859 [Cucumis melo]) HSP 1 Score: 300 bits (769), Expect = 4.81e-99 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Cucsat.G6345 vs. ExPASy TrEMBL
Match: A0A0A0KFC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094690 PE=4 SV=1) HSP 1 Score: 489 bits (1258), Expect = 8.15e-172 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Cucsat.G6345 vs. ExPASy TrEMBL
Match: A0A6J1DRL6 (proton pump-interactor BIP103-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022559 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 7.97e-103 Identity = 167/245 (68.16%), Postives = 198/245 (80.82%), Query Frame = 0
BLAST of Cucsat.G6345 vs. ExPASy TrEMBL
Match: A0A6J1DME1 (proton pump-interactor BIP103-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022559 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 4.20e-102 Identity = 167/245 (68.16%), Postives = 198/245 (80.82%), Query Frame = 0
BLAST of Cucsat.G6345 vs. ExPASy TrEMBL
Match: A0A5A7T9W3 (Proton pump-interactor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00980 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 7.24e-100 Identity = 160/186 (86.02%), Postives = 168/186 (90.32%), Query Frame = 0
BLAST of Cucsat.G6345 vs. ExPASy TrEMBL
Match: A0A1S4E2M1 (uncharacterized protein LOC103498859 OS=Cucumis melo OX=3656 GN=LOC103498859 PE=4 SV=1) HSP 1 Score: 300 bits (769), Expect = 2.33e-99 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Cucsat.G6345 vs. TAIR 10
Match: AT1G10880.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 47/185 (25.41%), Postives = 89/185 (48.11%), Query Frame = 0
BLAST of Cucsat.G6345 vs. TAIR 10
Match: AT4G27500.1 (proton pump interactor 1 ) HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04 Identity = 56/229 (24.45%), Postives = 104/229 (45.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|