Cucsat.G6345.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCATTGGAAGAACAGTTGACTCGTCGACAATAAAGATATTTCACATACCAACTTTGCGTGAGGAGCAAGTCCTGAGAAGAGAGCTAACATATTAACTTCATATAAACTAATCAAAGAATGTTTCCCTATATTCGATTAAAGCTACTGTCTAATCCCTTTCCCACCAAGAATTTGGAACACCCATTGCTTTGATTTTGAGGTATCATACGCCTTCTCTTTTTTCTGCACTCTGTTTTTCTTCTGCTCTTTGAATTTTCTTCAGTTATGAATCAGTAGGAATGTGAATACGTTGAAATTTTTTCATGGGTTTCTTTTTTTCTCTTTGTTGGAAGCCTTTTTTGCATTGGGCAAAGAACAGCCCCGCCATGCACGGAGGGGAGTTCGATTATGGAGTGAAGGGTGTGGTGGAGGAAGAACAGAAACCTGCTGGTGATGAGCTGATAGTGGATTATTATGATTATCTACACCAAATATTCGATGAAATGCCTGTTCCAGTTCGACAATTTTCTTTTGTCAAAGTTTTGCCACTTGAGAATCCTGAAGTATATGCCATGATCAAGAAAGCTGAAGAGACGATTGGAAAGATGAATCAAGATCAAGTTCTGTTAGCTCAGAAGATAAGGAAAAGAGTTGTATGTGAAAAGAAACCGTAGTCATTCCTAATCCTGGTTGAACATTATAGTCAATTCTCCTTGTTTGGTTCTAGCCTCTTCCAATAAATAGATCATTAGAATTTTCTATAACTTGAAAAGTTAGTTTTTTCTTTGTTGAAGTGATGTTGATTAATGATCTATAAGACATTGATTTTCATAAGTTTTCGTTGTAGATGGATGGCGATGATGTGAGGGCAAAATTATGCATGATAAATTACTATGATAACTGTGGAATTTCCCCAAATTGGGAGAAAGAGAGATTGGATACCCTGCATCTATCACTAGATAAACTGACTTTTGCAAACAGTGCATACAAAGAGAAATCGATTAACTCGTGCTTGTCGGGAGGGGAAGTCGATAAGCAGGTATGGCCTATTCAACTCAATTTCTTTTTGTATTCATTGTGACATCTTAGAGTTTCTTGATCTTCATTTTATTAATGTGTGTGTATACATTTGTTGATGTTTGAGCAGAAACTGTCATTTTCGATAGTACATGGCCGTAAAAACATGGCTGATGAGAGAAATCTATTAAGGGAGATCAAAGCAAGCCAAGGGAAGGATGATGGCATGACAGTAGAAGAACTCTATGCTCCTGTAATATTTAATATTAAGCATTAATCTTCAACTTTTGGTTCAATTCCTGTGATTTTTATTACTTGTATGAATTATCATATCTCTAAAGCCTATTGGTTTATGCAAACAGATTCAACGCCTAAAAGAGCAAATGTGCTACAACTATAGGGATTGTGCGAAAGCCGCTGATGATGCTGCTCGTAATAAAACCATTCTCAAAGACATCAAACAACATCAAATTGCTAGAGAGAAAGCTATTGCTGATGCCGTTGTGAATGGAAAATTGTGGAACTCCTTAGGTTCACAAAAAGCCATACGAGCAGAGGTAAGAGCCATAAACAAAGGTTAAATTAGACAAAGCACACCTAAACTTTGGGGCATGTTTCAATTACTTTTAGCATTTTTTTTTCATTTTAATCCTTGAACTTAGAACTTATTCAGAAAGTACCCCTTGGAGAGTTTTTTCTTCTTCTTTTTTTCCCATAAAATGGAGGGTTATGATATTACGAATTGGAAGGATAGCTGATTATAAAATTTGAAAAACCTACATTACATCCTTTACGACTTAGTTCGAACTATCTTGATGCCTAAGATCAGTTCTACAATTCAGTTCAACTCAAAAATACCATGAACATCATTTACATCATCACTCACAAACTCTATTCTTAAATATCAACTCTAACATCAATTTACATGAATGATATTGTAAATGATGTCAGGTAAGTATTTCAATTTTCAAACACCATCTTTAGAGACAACTTTCCTGATATCATTTTTGTGGGAAAACTTTCTAAGGGTATTTATTGGTACAGTTTCAAAGGTCAAGGTTTAAAATGAAACGAGCCTACCCAAAAGTTCAAGGGTATTTTTTGTATAATCTAGTCTAATGGAAATGTTAGAGATTTATCATATTCTATAAGTTGTAATTCATACTTGTGCAATGTTTCTTGTTAATGAACAGTTGCAGGAGGAACACAGCTACGAATACAACTCAGGTCAGGTTGAGCATAATCACAAAAAAATAAATATCAAAATTATAAAGTTAAAAAAAAAGTTGGAGAAGATAGAAAAGGATATAAGTTCTCTGCAGAAACGCTTGAAAGATACCAATCGAAAAAAGGGCGCGGCATACAGCATCATTCTTAAGCTGAAGAAGCAATACGAAGAGGAGGTATATATGATAAACTGATCACATACAAACTGAATATTTTATTGCTTAGTTATATTAAATTTGCACTCAGTTCGTTCATCAAATTATAAGTCGGTAACCAATCCGAGCATAGCTTAGTGGATTAAGGCATTAATTACCAATCGAAAGTTCAATTTTGATCTTCTACCATTTGCTTGTTGAACCAAATAATTAAAAGAAAGTTTAGAAGTATGCCTTTGTTCCTCTCTTCACTTGCAAAGTACTGCGAAGTAAGTGAAAATTTTTGTCGAAAAGAAGAAAGGTTTGTGTTGTGACATTGTTATGATATCTTATGTCTGTTAGACACCAAGATTCTTTCTTTTTTCATAGTTAGTGCTTGATTGTAATCATTGTGCAGTTGATTAAATAAGTTAATTTAGTTTTTAGTTTTTTATTTTTGAAACTTATGTTTGTTTATTCATATTTCCTACTATAATTTTCAAATTTCTGGAAGTAACATGTGGTTTTTTAGTCAAATCAAAAACAAAGTTTTTAAGAACCGTTTCTTCTGTTTTTCAAAACTTGACCAATTTTAAAAGAATTTTTGAAAAGTAGGTAATAAAAACAAAGAAACTAAGTGGGAGAGACTTAATATCCAAGATCCAAAAACCGTAGTAATATTTTGTTAGCTTTTCTTAAACTAGAGATCTGATATATTCTGTGGTATTTTATATGTTAAGAACGCTGGTTCCTCTCCCAAAGAAAGTTGAAGAACTTGCTGAGAAGAAAGCATTGCAGCACTTCAAGAATTATTTCGAGCACAGGTTTTTCATTAGCTTGCACATGCTATTACAACTTGAGTTCTAAGAGCTTGAGAACTGACTCTTCTTTTTTCTTTCGCCCTCTAACAAACAGGTTGAAAAGGTTATACAACATAACAATTGCCTCAGATTTCAAAAGTGATTAGGAACAGAGAGTCGATGTCTTTGTTAAAAGAGGTGCTTTCCTTAACTAGATTGCAATGGTTGATGAAAGATGTGGAAGGTCATTGATTTAAATCATGGTTGACTAAAGATGTAACGTATGAGTTTCTTTGGTAACCAAATATAGTAGCGTCAAGTGGTTGTCTGATGAGATTAGTCAAGTTCTAGCTCTCATAGATTAAAAAGTATATACATGTCAACAAAATTTCTCAGCTTGTGTCCTTGTAAAATTTATTGTTCACTTGCACATATTACATATGCTTGAAGATTTTGTTTGGTTATTTGTTGCTCAAATGTTTCCATTTCTGTAAGTATTATTCAAAAATATCAATGTG ATGCACGGAGGGGAGTTCGATTATGGAGTGAAGGGTGTGGTGGAGGAAGAACAGAAACCTGCTGGTGATGAGCTGATAGTGGATTATTATGATTATCTACACCAAATATTCGATGAAATGCCTGTTCCAGTTCGACAATTTTCTTTTGTCAAAGTTTTGCCACTTGAGAATCCTGAAGTATATGCCATGATCAAGAAAGCTGAAGAGACGATTGGAAAGATGAATCAAGATCAAGTTCTGTTAGCTCAGAAGATAAGGAAAAGAGTTATGGATGGCGATGATGTGAGGGCAAAATTATGCATGATAAATTACTATGATAACTGTGGAATTTCCCCAAATTGGGAGAAAGAGAGATTGGATACCCTGCATCTATCACTAGATAAACTGACTTTTGCAAACAGTGCATACAAAGAGAAATCGATTAACTCGTGCTTGTCGGGAGGGGAAGTCGATAAGCAGAAACTGTCATTTTCGATAGTACATGGCCGTAAAAACATGGCTGATGAGAGAAATCTATTAAGGGAGATCAAAGCAAGCCAAGGGAAGGATGATGGCATGACAGTAGAAGAACTCTATGCTCCTATTCAACGCCTAAAAGAGCAAATGTGCTACAACTATAGGGATTGTGCGAAAGCCGCTGATGATGCTGCTCGTAATAAAACCATTCTCAAAGACATCAAACAACATCAAATTGCTAGAGAGAAAGCTATTGCTGATGCCGTTGTGAATGGAAAATTGTGGAACTCCTTAGGTTCACAAAAAGCCATACGAGCAGAGTTGCAGGAGGAACACAGCTACGAATACAACTCAGGTCAGGTTGAGCATAATCACAAAAAAATAAATATCAAAATTATAAAGTTAAAAAAAAAGTTGGAGAAGATAGAAAAGGATATAAGTTCTCTGCAGAAACGCTTGAAAGATACCAATCGAAAAAAGGGCGCGGCATACAGCATCATTCTTAAGCTGAAGAAGCAATACGAAGAGGAGAACGCTGGTTCCTCTCCCAAAGAAAGTTGA MHGGEFDYGVKGVVEEEQKPAGDELIVDYYDYLHQIFDEMPVPVRQFSFVKVLPLENPEVYAMIKKAEETIGKMNQDQVLLAQKIRKRVMDGDDVRAKLCMINYYDNCGISPNWEKERLDTLHLSLDKLTFANSAYKEKSINSCLSGGEVDKQKLSFSIVHGRKNMADERNLLREIKASQGKDDGMTVEELYAPIQRLKEQMCYNYRDCAKAADDAARNKTILKDIKQHQIAREKAIADAVVNGKLWNSLGSQKAIRAELQEEHSYEYNSGQVEHNHKKINIKIIKLKKKLEKIEKDISSLQKRLKDTNRKKGAAYSIILKLKKQYEEENAGSSPKES Homology
BLAST of Cucsat.G6345.T2 vs. NCBI nr
Match: XP_031742609.1 (uncharacterized protein LOC105435772 [Cucumis sativus] >KAE8646760.1 hypothetical protein Csa_004820 [Cucumis sativus]) HSP 1 Score: 666 bits (1719), Expect = 2.51e-241 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. NCBI nr
Match: KAA0039823.1 (proton pump-interactor 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 438 bits (1127), Expect = 1.50e-151 Identity = 232/267 (86.89%), Postives = 243/267 (91.01%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. NCBI nr
Match: XP_016902472.1 (PREDICTED: uncharacterized protein LOC103498859 [Cucumis melo]) HSP 1 Score: 436 bits (1121), Expect = 4.50e-151 Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. NCBI nr
Match: TYK24674.1 (proton pump-interactor 2-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 430 bits (1106), Expect = 4.85e-143 Identity = 221/254 (87.01%), Postives = 234/254 (92.13%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. NCBI nr
Match: XP_022155410.1 (proton pump-interactor BIP103-like isoform X1 [Momordica charantia]) HSP 1 Score: 397 bits (1019), Expect = 1.78e-133 Identity = 218/334 (65.27%), Postives = 257/334 (76.95%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. ExPASy TrEMBL
Match: A0A0A0KFC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094690 PE=4 SV=1) HSP 1 Score: 666 bits (1719), Expect = 1.92e-240 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. ExPASy TrEMBL
Match: A0A5A7T9W3 (Proton pump-interactor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00980 PE=4 SV=1) HSP 1 Score: 438 bits (1127), Expect = 7.25e-152 Identity = 232/267 (86.89%), Postives = 243/267 (91.01%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. ExPASy TrEMBL
Match: A0A1S4E2M1 (uncharacterized protein LOC103498859 OS=Cucumis melo OX=3656 GN=LOC103498859 PE=4 SV=1) HSP 1 Score: 436 bits (1121), Expect = 2.18e-151 Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. ExPASy TrEMBL
Match: A0A5D3DM53 (Proton pump-interactor 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002240 PE=4 SV=1) HSP 1 Score: 430 bits (1106), Expect = 2.35e-143 Identity = 221/254 (87.01%), Postives = 234/254 (92.13%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. ExPASy TrEMBL
Match: A0A6J1DME1 (proton pump-interactor BIP103-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022559 PE=4 SV=1) HSP 1 Score: 397 bits (1019), Expect = 8.63e-134 Identity = 218/334 (65.27%), Postives = 257/334 (76.95%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. TAIR 10
Match: AT1G10880.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 49.7 bits (117), Expect = 5.4e-06 Identity = 47/185 (25.41%), Postives = 89/185 (48.11%), Query Frame = 0
BLAST of Cucsat.G6345.T2 vs. TAIR 10
Match: AT4G27500.1 (proton pump interactor 1 ) HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04 Identity = 56/229 (24.45%), Postives = 104/229 (45.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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