Cucsat.G6307 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6307
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glutaredoxin domain-containing protein
Location	ctg1429: 52103 .. 55923 (-)
RNA-Seq Expression	Cucsat.G6307
Synteny	Cucsat.G6307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATAAAGTAAAGTCTTTATTTTGATGCCTTAAATATAGTTAGTTTACTTTAGGAGGTCAAAAGTAAAGTGAAAGTGAACCTTTTGATAGGTTACAACAAATTGAGAAGATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTGTTTTTTAGATTTCCTTTATGTCCTTTTCATGATTTGGGTTTTCTTTGATTTGTTGGCAATATTTAGAAATTTGATCCTTCCTTTTTTTTTTTTTTTTTTTCTCAAGGTATTCTTTTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTGTTTTTTCTTTCGCTTATTTTAATACTTGCTTCTAAACTGAGGACTATAATCATTTTCTTTTCTTTTTTTCCTTTATGGTGATAACTCGATTTCCTGTTATATGTTCTAACTCAATTGTTAACTTGAATTTTGGGATTAAGTGGTTAGCTAATATGGCATCAGATTAGGAGATTCTTAATTTGAGCTGAATTGATCCCTGGGATGTTATTTTCTCCCAAATTCGTGATGTTAATAGTTCATTTGTTGGTTTTTATGAATCAAAGTGATGACCCCATATTGATCTATAAAACTTTGGTGGATTAATATGGAGCTCCATGTTTCGTTTTCAAACCAGCATGAGTTTTTCATACCATTTAGTTTTCTTGAATCCGTTTATGCATTTTGTAAGCTGACAAGTTTTTTTTCCGTTCAGGTCCCCAAGGGCCACAATTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACAGTACCAAACGTTTTCATCGGTGAGTATTGTGTTTGGAACTTTTAGCTCCTGTTTGACAATCATGGTTTTTTAGAATTGTGCTTGCTTTTTCACAATTTCTTCATCACGTGCTCATCTTTCTTAAGTAGACATTTGAATGTTAACCCAAATTCTAAGAACAAAAACAATTTTTTGAAAACTGTGATCAATATGTGGTAGTAGAATTTGTAGGCTTAATTTGTGAATATTCTTCATTGAAATAATATCTTCCGTAATAAATGACCATTTGATTCATGCAAAAGTTTTGCTTTTAACGGATTTGTTTTTTTGTTTAATCTCCATCGAGTACCTTTACTTATGATCCCAATCAATTCCCTTTGAACAATATGGTCATCAAGAAATTATAATGGTTGTCTATAAGCTGAGAACAGAAGCACCTAGAGGGGTTTAGGATTCTAGATCTCAATAAATGAATAGAGAACAATGTGGTAGCCCCTCGATCCCGGAAAACTTGACTTGGCTGAATGTGCCTTGCATGAGCTAAGATCTGATCATGGCATGGTACACTCTGAAGAATGGGCTGGCTGGTGCTCATAGTAGGTGGCATCATGTACACATAGTAGGTGGCTGGTGCTCCCACACTTACATGAATGGATGTGCTTGTAAATAAACAAAGACATTTAGTTTGAGTAAGGTGTCTGTGCCCAACACATATTAGACACCGAGTCGAAAACACACTTCTATTTCTTTTTAACAAAATGCTTTACAAACTGTAAAAAAGTTTATTTGCTATTGAAAGCTGCCCGCCCCTCTTTAGAAATGCAAGTAGGAAACATGGTTTTAAAGAGTTGGGGATAAAATATCCAAAAACTATGCCGGACCTCAATAGAAAAAATACATTCACGTTGCAAATGGTTCAAATCTTCCTTTGTCTTCTCACAGAAGAAAGTACTATTGATTTTTGCACACAGGTCTTTAAAGAAGTCTATGCTGTTAAACCTTTCAAGAGGAACTAGCCACATGAAATACCTTATATTTATCAGAATTCTTACTGTCCGAAGCATAGGATAGGAAATGGAAAAGGGTGGGGGTTGCAAATTCAATTGAGTATGCAAAGTTTGCAAAAGAAAAAGATCTAAAAATCAGTATTGCAAATAAGATAGATGAGCTCATAATCTTTTCTATTCTTTTAGGGCGAGGTCCAGTCCTATTAAATTTGTTTCCTCTTTTGTTTTTTTCTTGAAATGAGCTCATATTACTAAAAGCCTTGTTCGTTCATCACATTTTCACTTCTTCCTTGGTGAAAATCTCTGTATTTATCATAAACAACCAAAAAACACATAAAAATGATCAAATAGCTCAGCTATACTGTTGTATTGGTTCCTCTCCTGCTATGAAAAGGAATGTCCCTTGCACTCTAGAGAGAAAGAGAGAGCTGATTCCCTATACTCTTAAACTTCACAACCTTTTTATAGGAAACAATATTCAGAAAAAGGTGACAAAATTAGGTGACCTAAGAACAAGAGAATTTAAGAGCTGTAATTACAAACGAAATTAGTATGCCAACAGGGGTCATGCCTGCTCCATTGGCTAGGGTTTGGGGTCTCTTAGTCATACAAGCTTTATTCCGAAAGCCCTCAAGCACAGGTGCCCTCTTGTATAAGGGAGCGAAGCTCTGAGTCCCAGTTATAAAAAAAACGAAATGAAAAAAAGTATGATTTGTACACCACTAAGAGGCATTGTGTTGTATGCATTACGTTGTACAAAAAGCCAAAAAGACTCAAGGAGAGGAGAGGACTTGTCTTCAAATACTCTGTTCCTTTCCTCCAAAGGCCCCAAATAAAAGAACACACTACACAACGCCAAAAGGACTCTTCCCCTATCACTAACAACCCTTCCATCAAGCGTCTCCAAGAGCCAACCATCAATCTTCTTAGGGAGGCAGAATATAACTCCAAATTCCTTAATTAGCGTACGTTGCCACAAAAGAGCAATGGAGGGACAAGTAGTTGGGATTCTTCCTCATACAAACATTTACAACACACGTAAGGGTAAAAGTGAGAGGTCTCAATATCTCTCATTAGGGAGAGCAGTAGGCCACCAAAACAAGAGAGCGATGAACCCAACACCTTCTGGCAAACTAACAATACTACTGCCCCTTCGTGTTGTTTTAAATAGCTACTACCATTTTATTTATGGATGTTTACTCATTAGTTATCATTGTTTTATTCATGGTACTGATTGTTGTTTAAACTCACATTTCTCTCTGTGGCCAGGGGGCAAACATATAGGTGGTTGTACAGGTACATTTTTACAGCATAAGTTTATATAGAAGCTTTAAATCATTTAAAGGAATTATACATTGCATCACTTATATGGTTAACCGATTTCGTGCTTGCTATTGTGATGCAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTATGCTATCTGAAGCTAATGCTAAAAATTCAGAGACATAAACCTCAAGGCACATTTTGTTTTCTGAGCCATTTGGTGACTGACCTGTTGTTGATGTTCTCAATTCTACCTCAAGAGACACTTGTGTTTTTAGTTAGGAAAATGATGTATGTTAAGCTATTTGTGGATGAATTTGTTACAAGGAACTCCAACTTCTGCCATGAAATAAGAAAACATTTTATTACCATTTGAAAAATTGTTTTCTTGACATTTGTTTTTATTGAGATTTTTCTAAAGTAATAAACTTTTTCCTG

Coding sequence (CDS)

ATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTATTCTTTTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAATTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACAGTACCAAACGTTTTCATCGGGGGCAAACATATAGGTGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTATGCTATCTGAAGCTAATGCTAAAAATTCAGAGACATAA

Protein sequence

MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANAKNSET

Homology

[Close]

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34
Identity = 81/128 (63.28%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQ 153
           ++ T+T+N VV+YSKTWCSY  EVK LFKRLGVQPLV+ELD+LGPQGPQLQKVLERLTGQ
Sbjct: 74  IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 133

Query: 154 HTVPNVFI 161
           HTVPNVF+
Sbjct: 134 HTVPNVFV 140

[Close]

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.8e-32
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 70  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 129
           +S+++ +SSSS  SSFGSR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+GVQP V
Sbjct: 40  RSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHV 99

Query: 130 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           IELD+LG QGPQLQKVLERLTGQ TVPNVFIG
Sbjct: 100 IELDQLGAQGPQLQKVLERLTGQSTVPNVFIG 131

[Close]

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           FK L V+PLV+ELD+LG +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 108 FKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-10
Identity = 35/65 (53.85%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 97  ITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVP 156
           ++ N VVV+SKT+C Y   VK L  +LG Q  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDS-ESDGSDLQNALAEWTGQRTVP 69

Query: 157 NVFIG 162
           NVFIG
Sbjct: 70  NVFIG 73

[Close]

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  KTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQH 153
           K  ++ N VVV+SKT+C Y   VK L  +LG +  V+ELD     G ++Q  L   TGQ 
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELD-TESDGSEIQTALAEWTGQR 66

Query: 154 TVPNVFIG 162
           TVPNVFIG
Sbjct: 67  TVPNVFIG 73

[Close]

BLAST of Cucsat.G6307 vs. NCBI nr
Match: XP_004140671.2 (glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protein Csa_005488 [Cucumis sativus])

HSP 1 Score: 310 bits (793), Expect = 1.91e-105
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307 vs. NCBI nr
Match: XP_008459988.1 (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxin-C5 [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (742), Expect = 1.13e-97
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 2.18e-81
Identity = 136/151 (90.07%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQ 70
           MAVPSNFTS   NSPR LSFFFKASV+ LPFYNSCTSKSISISKHNA    TRTRPMSI+
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISISKHNALNASTRTRPMSIK 60

Query: 71  SVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVI 130
           +V SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF+RLGVQPLVI
Sbjct: 61  AV-SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFQRLGVQPLVI 120

Query: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIG 150

[Close]

BLAST of Cucsat.G6307 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (597), Expect = 9.03e-76
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFT-GFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISISKHNA   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 149

[Close]

BLAST of Cucsat.G6307 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 229 bits (584), Expect = 8.04e-74
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 147

[Close]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 310 bits (793), Expect = 9.23e-106
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 5.45e-98
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 5.45e-98
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL
Match: A0A6J1GS13 (glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456587 PE=3 SV=1)

HSP 1 Score: 229 bits (584), Expect = 3.89e-74
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 147

[Close]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL
Match: A0A6J1JVU3 (monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 2.69e-66
Identity = 118/152 (77.63%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAF-TGFTRTRPMSI 70
           MAVPSNFTS P    R LS  FK  V  LPFYN+C SKSISISKHNA   G  R RPMSI
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           +          +SSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  R----------ASSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 142

[Close]

BLAST of Cucsat.G6307 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 81/128 (63.28%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQ 153
           ++ T+T+N VV+YSKTWCSY  EVK LFKRLGVQPLV+ELD+LGPQGPQLQKVLERLTGQ
Sbjct: 74  IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 133

Query: 154 HTVPNVFI 161
           HTVPNVF+
Sbjct: 134 HTVPNVFV 140

[Close]

BLAST of Cucsat.G6307 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           FK L V+PLV+ELD+LG +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 108 FKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of Cucsat.G6307 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.4e-25
Identity = 67/129 (51.94%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDEL---------------------------GPQGPQLQKVLERLTGQ 162
           FK L V+PLV+ELD+L                           G +G QLQ VLE++TGQ
Sbjct: 108 FKSLQVEPLVVELDQLVSLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQ 167

[Close]

BLAST of Cucsat.G6307 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 94  KTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQH 153
           K  ++  PVVV+SKT+C Y   VK L  +LG    V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 154 TVPNVFI 161
           TVPNVFI
Sbjct: 83  TVPNVFI 88

[Close]

BLAST of Cucsat.G6307 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 91  ESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLT 150
           +  K  +    VVV+SKT+C Y   VK L ++LG +   +ELD     G Q+Q  L   T
Sbjct: 4   QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELD-TESDGSQIQSGLAEWT 63

Query: 151 GQHTVPNVFIG 162
           GQ TVPNVFIG
Sbjct: 64  GQRTVPNVFIG 73

The following BLAST results are available for this feature:

BLAST of Cucsat.G6307 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWS0	2.3e-34	63.28	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q0J3L4	4.8e-32	76.09	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
Q8LBS4	2.4e-28	65.69	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
O81187	5.1e-10	53.85	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
P55143	2.0e-09	48.53	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of Cucsat.G6307 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140671.2	1.91e-105	100.00	glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protei...	[more]
XP_008459988.1	1.13e-97	95.03	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxi...	[more]
XP_038874858.1	2.18e-81	90.07	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]
XP_023549357.1	9.03e-76	86.18	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954295.1	8.04e-74	86.18	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G6307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA52	9.23e-106	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]
A0A5D3DLT6	5.45e-98	95.03	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	5.45e-98	95.03	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]
A0A6J1GS13	3.89e-74	86.18	glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145658...	[more]
A0A6J1JVU3	2.69e-66	77.63	monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3...	[more]

BLAST of Cucsat.G6307 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	1.6e-35	63.28	Glutaredoxin family protein	[more]
AT2G20270.1	1.7e-29	65.69	Thioredoxin superfamily protein	[more]
AT2G20270.2	4.4e-25	51.94	Thioredoxin superfamily protein	[more]
AT5G63030.1	2.4e-10	49.25	Thioredoxin superfamily protein	[more]
AT5G40370.1	9.0e-10	45.07	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..93
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 49..111
None	No IPR available	PANTHER	PTHR45694:SF22	BNAA08G30760D PROTEIN	coord: 49..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6307.T1	Cucsat.G6307.T1	mRNA
Cucsat.G6307.T2	Cucsat.G6307.T2	mRNA
Cucsat.G6307.T3	Cucsat.G6307.T3	mRNA
Cucsat.G6307.T4	Cucsat.G6307.T4	mRNA
Cucsat.G6307.T7	Cucsat.G6307.T7	mRNA
Cucsat.G6307.T6	Cucsat.G6307.T6	mRNA
Cucsat.G6307.T5	Cucsat.G6307.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0097573	glutathione oxidoreductase activity