Cucsat.G6307.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G6307.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glutaredoxin domain-containing protein
Location	ctg1429: 52324 .. 55903 (-)
RNA-Seq Expression	Cucsat.G6307.T6
Synteny	Cucsat.G6307.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATAAAGTAAAGTCTTTATTTTGATGCCTTAAATATAGTTAGTTTACTTTAGGAGGTCAAAAGTAAAGTGAAAGTGAACCTTTTGATAGGTTACAACAAATTGAGAAGATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTGTTTTTTAGATTTCCTTTATGTCCTTTTCATGATTTGGGTTTTCTTTGATTTGTTGGCAATATTTAGAAATTTGATCCTTCCTTTTTTTTTTTTTTTTTTTCTCAAGGTATTCTTTTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTGTTTTTTCTTTCGCTTATTTTAATACTTGCTTCTAAACTGAGGACTATAATCATTTTCTTTTCTTTTTTTCCTTTATGGTGATAACTCGATTTCCTGTTATATGTTCTAACTCAATTGTTAACTTGAATTTTGGGATTAAGTGGTTAGCTAATATGGCATCAGATTAGGAGATTCTTAATTTGAGCTGAATTGATCCCTGGGATGTTATTTTCTCCCAAATTCGTGATGTTAATAGTTCATTTGTTGGTTTTTATGAATCAAAGTGATGACCCCATATTGATCTATAAAACTTTGGTGGATTAATATGGAGCTCCATGTTTCGTTTTCAAACCAGCATGAGTTTTTCATACCATTTAGTTTTCTTGAATCCGTTTATGCATTTTGTAAGCTGACAAGTTTTTTTTCCGTTCAGGTCCCCAAGGGCCACAATTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACAGTACCAAACGTTTTCATCGGTGAGTATTGTGTTTGGAACTTTTAGCTCCTGTTTGACAATCATGGTTTTTTAGAATTGTGCTTGCTTTTTCACAATTTCTTCATCACGTGCTCATCTTTCTTAAGTAGACATTTGAATGTTAACCCAAATTCTAAGAACAAAAACAATTTTTTGAAAACTGTGATCAATATGTGGTAGTAGAATTTGTAGGCTTAATTTGTGAATATTCTTCATTGAAATAATATCTTCCGTAATAAATGACCATTTGATTCATGCAAAAGTTTTGCTTTTAACGGATTTGTTTTTTTGTTTAATCTCCATCGAGTACCTTTACTTATGATCCCAATCAATTCCCTTTGAACAATATGGTCATCAAGAAATTATAATGGTTGTCTATAAGCTGAGAACAGAAGCACCTAGAGGGGTTTAGGATTCTAGATCTCAATAAATGAATAGAGAACAATGTGGTAGCCCCTCGATCCCGGAAAACTTGACTTGGCTGAATGTGCCTTGCATGAGCTAAGATCTGATCATGGCATGGTACACTCTGAAGAATGGGCTGGCTGGTGCTCATAGTAGGTGGCATCATGTACACATAGTAGGTGGCTGGTGCTCCCACACTTACATGAATGGATGTGCTTGTAAATAAACAAAGACATTTAGTTTGAGTAAGGTGTCTGTGCCCAACACATATTAGACACCGAGTCGAAAACACACTTCTATTTCTTTTTAACAAAATGCTTTACAAACTGTAAAAAAGTTTATTTGCTATTGAAAGCTGCCCGCCCCTCTTTAGAAATGCAAGTAGGAAACATGGTTTTAAAGAGTTGGGGATAAAATATCCAAAAACTATGCCGGACCTCAATAGAAAAAATACATTCACGTTGCAAATGGTTCAAATCTTCCTTTGTCTTCTCACAGAAGAAAGTACTATTGATTTTTGCACACAGGTCTTTAAAGAAGTCTATGCTGTTAAACCTTTCAAGAGGAACTAGCCACATGAAATACCTTATATTTATCAGAATTCTTACTGTCCGAAGCATAGGATAGGAAATGGAAAAGGGTGGGGGTTGCAAATTCAATTGAGTATGCAAAGTTTGCAAAAGAAAAAGATCTAAAAATCAGTATTGCAAATAAGATAGATGAGCTCATAATCTTTTCTATTCTTTTAGGGCGAGGTCCAGTCCTATTAAATTTGTTTCCTCTTTTGTTTTTTTCTTGAAATGAGCTCATATTACTAAAAGCCTTGTTCGTTCATCACATTTTCACTTCTTCCTTGGTGAAAATCTCTGTATTTATCATAAACAACCAAAAAACACATAAAAATGATCAAATAGCTCAGCTATACTGTTGTATTGGTTCCTCTCCTGCTATGAAAAGGAATGTCCCTTGCACTCTAGAGAGAAAGAGAGAGCTGATTCCCTATACTCTTAAACTTCACAACCTTTTTATAGGAAACAATATTCAGAAAAAGGTGACAAAATTAGGTGACCTAAGAACAAGAGAATTTAAGAGCTGTAATTACAAACGAAATTAGTATGCCAACAGGGGTCATGCCTGCTCCATTGGCTAGGGTTTGGGGTCTCTTAGTCATACAAGCTTTATTCCGAAAGCCCTCAAGCACAGGTGCCCTCTTGTATAAGGGAGCGAAGCTCTGAGTCCCAGTTATAAAAAAAACGAAATGAAAAAAAGTATGATTTGTACACCACTAAGAGGCATTGTGTTGTATGCATTACGTTGTACAAAAAGCCAAAAAGACTCAAGGAGAGGAGAGGACTTGTCTTCAAATACTCTGTTCCTTTCCTCCAAAGGCCCCAAATAAAAGAACACACTACACAACGCCAAAAGGACTCTTCCCCTATCACTAACAACCCTTCCATCAAGCGTCTCCAAGAGCCAACCATCAATCTTCTTAGGGAGGCAGAATATAACTCCAAATTCCTTAATTAGCGTACGTTGCCACAAAAGAGCAATGGAGGGACAAGTAGTTGGGATTCTTCCTCATACAAACATTTACAACACACGTAAGGGTAAAAGTGAGAGGTCTCAATATCTCTCATTAGGGAGAGCAGTAGGCCACCAAAACAAGAGAGCGATGAACCCAACACCTTCTGGCAAACTAACAATACTACTGCCCCTTCGTGTTGTTTTAAATAGCTACTACCATTTTATTTATGGATGTTTACTCATTAGTTATCATTGTTTTATTCATGGTACTGATTGTTGTTTAAACTCACATTTCTCTCTGTGGCCAGGGGGCAAACATATAGGTGGTTGTACAGGTACATTTTTACAGCATAAGTTTATATAGAAGCTTTAAATCATTTAAAGGAATTATACATTGCATCACTTATATGGTTAACCGATTTCGTGCTTGCTATTGTGATGCAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTATGCTATC

Coding sequence (CDS)

ATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTGA

Protein sequence

MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS

Homology

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 38/79 (48.10%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCS 112
           ++ T+T+N VV+YSKTWCS
Sbjct: 74  IRKTVTENTVVIYSKTWCS 91

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 112
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCS
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCS 96

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-06
Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 70  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 112
           +S+++ +SSSS  SSFGSR+E+SVK T+  NPVV+YSK+WCS
Sbjct: 40  RSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCS 81

[Close]

BLAST of Cucsat.G6307.T6 vs. NCBI nr
Match: XP_004140671.2 (glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protein Csa_005488 [Cucumis sativus])

HSP 1 Score: 210 bits (534), Expect = 5.24e-67
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111

[Close]

BLAST of Cucsat.G6307.T6 vs. NCBI nr
Match: XP_008459988.1 (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxin-C5 [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (491), Expect = 1.82e-60
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111

[Close]

BLAST of Cucsat.G6307.T6 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 153 bits (387), Expect = 8.26e-45
Identity = 88/101 (87.13%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQ 70
           MAVPSNFTS   NSPR LSFFFKASV+ LPFYNSCTSKSISISKHNA    TRTRPMSI+
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISISKHNALNASTRTRPMSIK 60

Query: 71  SVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           +V SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  AV-SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 100

[Close]

BLAST of Cucsat.G6307.T6 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139 bits (350), Expect = 3.29e-39
Identity = 83/102 (81.37%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFT-GFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISISKHNA   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 99

[Close]

BLAST of Cucsat.G6307.T6 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 134 bits (337), Expect = 2.90e-37
Identity = 83/102 (81.37%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 97

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 210 bits (534), Expect = 2.54e-67
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 8.83e-61
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 8.83e-61
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL
Match: A0A6J1GS13 (glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456587 PE=3 SV=1)

HSP 1 Score: 134 bits (337), Expect = 1.40e-37
Identity = 83/102 (81.37%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 97

[Close]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL
Match: A0A6J1DUP0 (glutaredoxin-C5, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024192 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 4.15e-31
Identity = 69/101 (68.32%), Postives = 79/101 (78.22%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQ 70
           MAV SNFTS    SPR LSFFFKASV+ LPF+NSCT KS SIS +NA  G +R++ +SI+
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 71  SVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 111
           +V       SSSSSFGSRLEESVK TI+QNPVVVYSKTWCS
Sbjct: 61  AV-------SSSSSFGSRLEESVKATISQNPVVVYSKTWCS 94

[Close]

BLAST of Cucsat.G6307.T6 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-09
Identity = 38/79 (48.10%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCS 112
           ++ T+T+N VV+YSKTWCS
Sbjct: 74  IRKTVTENTVVIYSKTWCS 91

[Close]

BLAST of Cucsat.G6307.T6 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 112
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCS
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCS 96

[Close]

BLAST of Cucsat.G6307.T6 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCS 112
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCS
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCS 96

The following BLAST results are available for this feature:

BLAST of Cucsat.G6307.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWS0	1.2e-07	48.10	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q8LBS4	2.3e-06	61.54	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
Q0J3L4	5.1e-06	61.90	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]

BLAST of Cucsat.G6307.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140671.2	5.24e-67	100.00	glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protei...	[more]
XP_008459988.1	1.82e-60	93.69	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxi...	[more]
XP_038874858.1	8.26e-45	87.13	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]
XP_023549357.1	3.29e-39	81.37	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954295.1	2.90e-37	81.37	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G6307.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA52	2.54e-67	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]
A0A5D3DLT6	8.83e-61	93.69	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	8.83e-61	93.69	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]
A0A6J1GS13	1.40e-37	81.37	glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145658...	[more]
A0A6J1DUP0	4.15e-31	68.32	glutaredoxin-C5, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Cucsat.G6307.T6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	8.6e-09	48.10	Glutaredoxin family protein	[more]
AT2G20270.1	1.6e-07	61.54	Thioredoxin superfamily protein	[more]
AT2G20270.2	1.6e-07	61.54	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..93
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 49..111
None	No IPR available	PANTHER	PTHR45694:SF22	BNAA08G30760D PROTEIN	coord: 49..111

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G6307	Cucsat.G6307	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T6.E1	Cucsat.G6307.T6.E1	exon
Cucsat.G6307.T6.E2	Cucsat.G6307.T6.E2	exon
Cucsat.G6307.T6.E3	Cucsat.G6307.T6.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T6.C1	Cucsat.G6307.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T6	Cucsat.G6307.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0097573	glutathione oxidoreductase activity