Cucsat.G6307.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G6307.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glutaredoxin domain-containing protein
Location	ctg1429: 52344 .. 55920 (-)
RNA-Seq Expression	Cucsat.G6307.T5
Synteny	Cucsat.G6307.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGAGAAAACAATTACATAATAAAGTAAAGTCTTTATTTTGATGCCTTAAATATAGTTAGTTTACTTTAGGAGGTCAAAAGTAAAGTGAAAGTGAACCTTTTGATAGGTTACAACAAATTGAGAAGATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTGTTTTTTAGATTTCCTTTATGTCCTTTTCATGATTTGGGTTTTCTTTGATTTGTTGGCAATATTTAGAAATTTGATCCTTCCTTTTTTTTTTTTTTTTTTTCTCAAGGTATTCTTTTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTGTTTTTTCTTTCGCTTATTTTAATACTTGCTTCTAAACTGAGGACTATAATCATTTTCTTTTCTTTTTTTCCTTTATGGTGATAACTCGATTTCCTGTTATATGTTCTAACTCAATTGTTAACTTGAATTTTGGGATTAAGTGGTTAGCTAATATGGCATCAGATTAGGAGATTCTTAATTTGAGCTGAATTGATCCCTGGGATGTTATTTTCTCCCAAATTCGTGATGTTAATAGTTCATTTGTTGGTTTTTATGAATCAAAGTGATGACCCCATATTGATCTATAAAACTTTGGTGGATTAATATGGAGCTCCATGTTTCGTTTTCAAACCAGCATGAGTTTTTCATACCATTTAGTTTTCTTGAATCCGTTTATGCATTTTGTAAGCTGACAAGTTTTTTTTCCGTTCAGGTCCCCAAGGGCCACAATTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACAGTACCAAACGTTTTCATCGGTGAGTATTGTGTTTGGAACTTTTAGCTCCTGTTTGACAATCATGGTTTTTTAGAATTGTGCTTGCTTTTTCACAATTTCTTCATCACGTGCTCATCTTTCTTAAGTAGACATTTGAATGTTAACCCAAATTCTAAGAACAAAAACAATTTTTTGAAAACTGTGATCAATATGTGGTAGTAGAATTTGTAGGCTTAATTTGTGAATATTCTTCATTGAAATAATATCTTCCGTAATAAATGACCATTTGATTCATGCAAAAGTTTTGCTTTTAACGGATTTGTTTTTTTGTTTAATCTCCATCGAGTACCTTTACTTATGATCCCAATCAATTCCCTTTGAACAATATGGTCATCAAGAAATTATAATGGTTGTCTATAAGCTGAGAACAGAAGCACCTAGAGGGGTTTAGGATTCTAGATCTCAATAAATGAATAGAGAACAATGTGGTAGCCCCTCGATCCCGGAAAACTTGACTTGGCTGAATGTGCCTTGCATGAGCTAAGATCTGATCATGGCATGGTACACTCTGAAGAATGGGCTGGCTGGTGCTCATAGTAGGTGGCATCATGTACACATAGTAGGTGGCTGGTGCTCCCACACTTACATGAATGGATGTGCTTGTAAATAAACAAAGACATTTAGTTTGAGTAAGGTGTCTGTGCCCAACACATATTAGACACCGAGTCGAAAACACACTTCTATTTCTTTTTAACAAAATGCTTTACAAACTGTAAAAAAGTTTATTTGCTATTGAAAGCTGCCCGCCCCTCTTTAGAAATGCAAGTAGGAAACATGGTTTTAAAGAGTTGGGGATAAAATATCCAAAAACTATGCCGGACCTCAATAGAAAAAATACATTCACGTTGCAAATGGTTCAAATCTTCCTTTGTCTTCTCACAGAAGAAAGTACTATTGATTTTTGCACACAGGTCTTTAAAGAAGTCTATGCTGTTAAACCTTTCAAGAGGAACTAGCCACATGAAATACCTTATATTTATCAGAATTCTTACTGTCCGAAGCATAGGATAGGAAATGGAAAAGGGTGGGGGTTGCAAATTCAATTGAGTATGCAAAGTTTGCAAAAGAAAAAGATCTAAAAATCAGTATTGCAAATAAGATAGATGAGCTCATAATCTTTTCTATTCTTTTAGGGCGAGGTCCAGTCCTATTAAATTTGTTTCCTCTTTTGTTTTTTTCTTGAAATGAGCTCATATTACTAAAAGCCTTGTTCGTTCATCACATTTTCACTTCTTCCTTGGTGAAAATCTCTGTATTTATCATAAACAACCAAAAAACACATAAAAATGATCAAATAGCTCAGCTATACTGTTGTATTGGTTCCTCTCCTGCTATGAAAAGGAATGTCCCTTGCACTCTAGAGAGAAAGAGAGAGCTGATTCCCTATACTCTTAAACTTCACAACCTTTTTATAGGAAACAATATTCAGAAAAAGGTGACAAAATTAGGTGACCTAAGAACAAGAGAATTTAAGAGCTGTAATTACAAACGAAATTAGTATGCCAACAGGGGTCATGCCTGCTCCATTGGCTAGGGTTTGGGGTCTCTTAGTCATACAAGCTTTATTCCGAAAGCCCTCAAGCACAGGTGCCCTCTTGTATAAGGGAGCGAAGCTCTGAGTCCCAGTTATAAAAAAAACGAAATGAAAAAAAGTATGATTTGTACACCACTAAGAGGCATTGTGTTGTATGCATTACGTTGTACAAAAAGCCAAAAAGACTCAAGGAGAGGAGAGGACTTGTCTTCAAATACTCTGTTCCTTTCCTCCAAAGGCCCCAAATAAAAGAACACACTACACAACGCCAAAAGGACTCTTCCCCTATCACTAACAACCCTTCCATCAAGCGTCTCCAAGAGCCAACCATCAATCTTCTTAGGGAGGCAGAATATAACTCCAAATTCCTTAATTAGCGTACGTTGCCACAAAAGAGCAATGGAGGGACAAGTAGTTGGGATTCTTCCTCATACAAACATTTACAACACACGTAAGGGTAAAAGTGAGAGGTCTCAATATCTCTCATTAGGGAGAGCAGTAGGCCACCAAAACAAGAGAGCGATGAACCCAACACCTTCTGGCAAACTAACAATACTACTGCCCCTTCGTGTTGTTTTAAATAGCTACTACCATTTTATTTATGGATGTTTACTCATTAGTTATCATTGTTTTATTCATGGTACTGATTGTTGTTTAAACTCACATTTCTCTCTGTGGCCAGGGGGCAAACATATAGGTGGTTGTACAGGTACATTTTTACAGCATAAGTTTATATAGAAGCTTTAAATCATTTAAAGGAATTATACATTGCATCACTTATATGGTTAACCGATTTCGTGCTTGCTATTGTGATGCAGATACTGTGAAACTATACCGAAAAGGA

Coding sequence (CDS)

ATGAAGAATTGGAGCTTGAGCTTCAAATCAATGGCGGTTCCTTCCAATTTCACCTCCTTTCCTCCTAATTCTCCTCGCCCTCTTTCCTTCTTCTTTAAAGCTTCCGTTTTTCCCCTTCCCTTTTACAATTCCTGCACTTCCAAATCCATTTCCATCTCGAAACACAATGCCTTCACTGGCTTCACAAGGACTAGACCCATGTCGATTCAATCCGTTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTGGTTCTAGACTTGAGGAGAGTGTCAAAACTACAATTACACAGAACCCAGTTGTTGTTTACTCCAAGACTTGGTGTTCGTATTCTTTTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAATTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACAGTACCAAACGTTTTCATCGGTGAGTATTGTGTTTGGAACTTTTAG

Protein sequence

MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGEYCVWNF

Homology

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34
Identity = 81/128 (63.28%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQ 153
           ++ T+T+N VV+YSKTWCSY  EVK LFKRLGVQPLV+ELD+LGPQGPQLQKVLERLTGQ
Sbjct: 74  IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 133

Query: 154 HTVPNVFI 161
           HTVPNVF+
Sbjct: 134 HTVPNVFV 140

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.8e-32
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 70  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 129
           +S+++ +SSSS  SSFGSR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+GVQP V
Sbjct: 40  RSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHV 99

Query: 130 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           IELD+LG QGPQLQKVLERLTGQ TVPNVFIG
Sbjct: 100 IELDQLGAQGPQLQKVLERLTGQSTVPNVFIG 131

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           FK L V+PLV+ELD+LG +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 108 FKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-10
Identity = 35/65 (53.85%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 97  ITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVP 156
           ++ N VVV+SKT+C Y   VK L  +LG Q  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDS-ESDGSDLQNALAEWTGQRTVP 69

Query: 157 NVFIG 162
           NVFIG
Sbjct: 70  NVFIG 73

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  KTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQH 153
           K  ++ N VVV+SKT+C Y   VK L  +LG +  V+ELD     G ++Q  L   TGQ 
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELD-TESDGSEIQTALAEWTGQR 66

Query: 154 TVPNVFIG 162
           TVPNVFIG
Sbjct: 67  TVPNVFIG 73

[Close]

BLAST of Cucsat.G6307.T5 vs. NCBI nr
Match: XP_004140671.2 (glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protein Csa_005488 [Cucumis sativus])

HSP 1 Score: 310 bits (793), Expect = 1.91e-105
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307.T5 vs. NCBI nr
Match: XP_008459988.1 (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxin-C5 [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (742), Expect = 1.13e-97
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307.T5 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 2.18e-81
Identity = 136/151 (90.07%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQ 70
           MAVPSNFTS   NSPR LSFFFKASV+ LPFYNSCTSKSISISKHNA    TRTRPMSI+
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISISKHNALNASTRTRPMSIK 60

Query: 71  SVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVI 130
           +V SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF+RLGVQPLVI
Sbjct: 61  AV-SSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFQRLGVQPLVI 120

Query: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIG 150

[Close]

BLAST of Cucsat.G6307.T5 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (597), Expect = 9.03e-76
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFT-GFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISISKHNA   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 149

[Close]

BLAST of Cucsat.G6307.T5 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 229 bits (584), Expect = 8.04e-74
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 147

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 310 bits (793), Expect = 9.23e-106
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG
Sbjct: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF
Sbjct: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 5.45e-98
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 5.45e-98
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKNWSLSFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTG 60
           MKNWSLS KSMAVPSNFTS PPNSPRPLSFFFKASVF LPFYNSCTSKSISISKHN+  G
Sbjct: 1   MKNWSLSLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNG 60

Query: 61  FTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALF 120
           FTRTR MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALF
Sbjct: 61  FTRTRSMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF 120

Query: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 KRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL
Match: A0A6J1GS13 (glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456587 PE=3 SV=1)

HSP 1 Score: 229 bits (584), Expect = 3.89e-74
Identity = 131/152 (86.18%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           ++V  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  RAV--SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 147

[Close]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL
Match: A0A6J1JVU3 (monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 2.69e-66
Identity = 118/152 (77.63%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAF-TGFTRTRPMSI 70
           MAVPSNFTS P    R LS  FK  V  LPFYN+C SKSISISKHNA   G  R RPMSI
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60

Query: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130
           +          +SSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 61  R----------ASSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIG 142

[Close]

BLAST of Cucsat.G6307.T5 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 81/128 (63.28%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 34  ASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIQSV-SSSSSSSSSSSSFGSRLEES 93
           +S+ P+P   SC+S S S+    +       +  S++++ SSSS++SSSSSSFGSR+EES
Sbjct: 14  SSLDPIPSV-SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFGSRMEES 73

Query: 94  VKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQ 153
           ++ T+T+N VV+YSKTWCSY  EVK LFKRLGVQPLV+ELD+LGPQGPQLQKVLERLTGQ
Sbjct: 74  IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 133

Query: 154 HTVPNVFI 161
           HTVPNVF+
Sbjct: 134 HTVPNVFV 140

[Close]

BLAST of Cucsat.G6307.T5 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 162
           FK L V+PLV+ELD+LG +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 108 FKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of Cucsat.G6307.T5 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.4e-25
Identity = 67/129 (51.94%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 60  GFTRTRPMSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKAL 119
           G     P+   SV + SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYS +VK+L
Sbjct: 48  GIASWPPLRCSSVKAMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSL 107

Query: 120 FKRLGVQPLVIELDEL---------------------------GPQGPQLQKVLERLTGQ 162
           FK L V+PLV+ELD+L                           G +G QLQ VLE++TGQ
Sbjct: 108 FKSLQVEPLVVELDQLVSLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQ 167

[Close]

BLAST of Cucsat.G6307.T5 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 94  KTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLTGQH 153
           K  ++  PVVV+SKT+C Y   VK L  +LG    V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 154 TVPNVFI 161
           TVPNVFI
Sbjct: 83  TVPNVFI 88

[Close]

BLAST of Cucsat.G6307.T5 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 91  ESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVIELDELGPQGPQLQKVLERLT 150
           +  K  +    VVV+SKT+C Y   VK L ++LG +   +ELD     G Q+Q  L   T
Sbjct: 4   QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELD-TESDGSQIQSGLAEWT 63

Query: 151 GQHTVPNVFIG 162
           GQ TVPNVFIG
Sbjct: 64  GQRTVPNVFIG 73

The following BLAST results are available for this feature:

BLAST of Cucsat.G6307.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWS0	2.3e-34	63.28	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q0J3L4	4.8e-32	76.09	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
Q8LBS4	2.4e-28	65.69	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
O81187	5.1e-10	53.85	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
P55143	2.0e-09	48.53	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of Cucsat.G6307.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140671.2	1.91e-105	100.00	glutaredoxin-C5, chloroplastic [Cucumis sativus] >KGN46358.1 hypothetical protei...	[more]
XP_008459988.1	1.13e-97	95.03	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxi...	[more]
XP_038874858.1	2.18e-81	90.07	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]
XP_023549357.1	9.03e-76	86.18	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954295.1	8.04e-74	86.18	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G6307.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA52	9.23e-106	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]
A0A5D3DLT6	5.45e-98	95.03	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	5.45e-98	95.03	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]
A0A6J1GS13	3.89e-74	86.18	glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145658...	[more]
A0A6J1JVU3	2.69e-66	77.63	monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3...	[more]

BLAST of Cucsat.G6307.T5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	1.6e-35	63.28	Glutaredoxin family protein	[more]
AT2G20270.1	1.7e-29	65.69	Thioredoxin superfamily protein	[more]
AT2G20270.2	4.4e-25	51.94	Thioredoxin superfamily protein	[more]
AT5G63030.1	2.4e-10	49.25	Thioredoxin superfamily protein	[more]
AT5G40370.1	9.0e-10	45.07	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 102..120 score: 36.18 coord: 148..161 score: 57.14
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 82..168 e-value: 1.1E-26 score: 94.6
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 72..164
None	No IPR available	PANTHER	PTHR45694:SF18	GLUTAREDOXIN 2	coord: 72..164
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 90..168 score: 16.590748
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 101..165 e-value: 3.03093E-28 score: 98.3807
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 102..162 e-value: 7.0E-13 score: 48.6
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 90..167

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G6307	Cucsat.G6307	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T5.E1	Cucsat.G6307.T5.E1	exon
Cucsat.G6307.T5.E2	Cucsat.G6307.T5.E2	exon
Cucsat.G6307.T5.E3	Cucsat.G6307.T5.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T5.C3	Cucsat.G6307.T5.C3	CDS
Cucsat.G6307.T5.C2	Cucsat.G6307.T5.C2	CDS
Cucsat.G6307.T5.C1	Cucsat.G6307.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6307.T5	Cucsat.G6307.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity