Cucsat.G5932 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAACTCTCCCACCACCACCGTGCTTTACTTCGAGTACGTTTCTCTTCTCTTCTTTTCATTTCCCATTTCAATTTCATTTTATTCATTTCTTTTCTGTTTTTTCATTCATAGGTCGAGAAAGTCATCAAGGATCAGAATGCTCTGGATGCTTATGTTTTAATTGAAGGCTACCTTAATCTCTTGCTTGAAAGAACCACTCTCCTCGAACAACAAAGGTTTGTTTTCTTATTCATCTCTCCTCTACCCTCCTTCTTAATCATTTGATTTGATTTTACTTATTATTATTTGTTTTTATTGCAGTGAGTGCCCTGAAGAATTGAAAGAGGCAGTTGCTGGGTTACTCTTTGCAGCTTCAAGATGTGGGGATTTCCCTGAACTTCATGAGATCAAATCAGTTTTGACCACTCGTTTTGGCAAGGAATTCACTGCACGTGCTGTTGAATTACGCAACAATTGTGGAGTTAATCTTTCGGTAAATTTTGGGTTCTCTTCATTAACTCCTGCTTCATTCCTTTCTTTTATTCATTCTTTGCTCTCTCTCTGTAGTTAATGCAAAAACTTTCCACAAGGCAGCCCACTTTGGAAACTAGAATGGACGCCCTCAAATCCATTGCTTCCGAGAATGGGATTGTATTGCAAATTGACCAACTCCCTTCTTCCAAACAGGTATACAACTTGAACTTTGACATTTTATTTTACTGCTTACAGCTGTGTTTTGGTAGCAGAGTCGAAACCCGAAATCTTCAATCTTTGTAAAACCCAATTTGGGATTCTTTTTCTGATTATCGCAGGAAAAAGTAGGCAGAAACGGGAGGCAAAGCGAGGCAGAGGGACAGAGTGAAGAATTTTCAAATGAAGTGGCATCTGGTTCAAAAACAACGTACAAAGATGTGGCGGATGCAGCACAAGCCGCTTTTGAATCAGCAGCTCAAGCAGCAGCAGCTGCACGAGCTGCCATGGAGCTCTCCCGACCCCATGAGGGTCCAAGCAGCCCGAGTAAGCCTGGGTCTGGAACAACTTCAGATAACAAACAAAAGAAAGAGAAAAGAGAGGTTGAATCTAAAGTAAAACAAGAAATGGAGGAATATGGAAATGGGAGGAAAGGAGAAGGAGAAAGGGAAGAAGAAGAAGGGGATGGAATGGATGAGGAGAGAACTTTAAATGGGTTGAAGATGGAAACAAAGGTAGAGAAAACAGAGGTAAGTGAGAAGGGAAGCTTTCGTTTAAATCTGGAGAAGAAACCAATTTCAGTAAGAACAAGAAGAGTAGGAGGATACTGAAGAAGAACAATATATAAGTGGTTCGTAATTGGGTTTGCTTTTGAATTCTTTCATCATATGTGTAATACATTTTTTGGTTTGTGGGAATATAATGGAAATTGTGTAGTTGTGTGGGTTGGGAATTCTGGTATCGTATGGTAAATACAACATTTTTGTTTGTTAGACAATGGTATATTCACATTAATATTTGACGACCACTTTTTTTGTTTTGAACTCCAAATTATTCAATCAACTTC ATGCAAAAACTTTCCACAAGGCAGCCCACTTTGGAAACTAGAATGGACGCCCTCAAATCCATTGCTTCCGAGAATGGGATTGTATTGCAAATTGACCAACTCCCTTCTTCCAAACAGGAAAAAGTAGGCAGAAACGGGAGGCAAAGCGAGGCAGAGGGACAGAGTGAAGAATTTTCAAATGAAGTGGCATCTGGTTCAAAAACAACGTACAAAGATGTGGCGGATGCAGCACAAGCCGCTTTTGAATCAGCAGCTCAAGCAGCAGCAGCTGCACGAGCTGCCATGGAGCTCTCCCGACCCCATGAGGGTCCAAGCAGCCCGAGTAAGCCTGGGTCTGGAACAACTTCAGATAACAAACAAAAGAAAGAGAAAAGAGAGGTTGAATCTAAAGTAAAACAAGAAATGGAGGAATATGGAAATGGGAGGAAAGGAGAAGGAGAAAGGGAAGAAGAAGAAGGGGATGGAATGGATGAGGAGAGAACTTTAAATGGGTTGAAGATGGAAACAAAGGTAGAGAAAACAGAGGTAAGTGAGAAGGGAAGCTTTCGTTTAAATCTGGAGAAGAAACCAATTTCAGTAAGAACAAGAAGAGTAGGAGGATACTGA MQKLSTRQPTLETRMDALKSIASENGIVLQIDQLPSSKQEKVGRNGRQSEAEGQSEEFSNEVASGSKTTYKDVADAAQAAFESAAQAAAAARAAMELSRPHEGPSSPSKPGSGTTSDNKQKKEKREVESKVKQEMEEYGNGRKGEGEREEEEGDGMDEERTLNGLKMETKVEKTEVSEKGSFRLNLEKKPISVRTRRVGGY Homology
BLAST of Cucsat.G5932 vs. ExPASy Swiss-Prot
Match: P53990 (IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 26/90 (28.89%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy Swiss-Prot
Match: Q9CX00 (IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 26/90 (28.89%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy Swiss-Prot
Match: Q5R6G8 (IST1 homolog OS=Pongo abelii OX=9601 GN=IST1 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 26/90 (28.89%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy Swiss-Prot
Match: Q568Z6 (IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 26/90 (28.89%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy Swiss-Prot
Match: Q3ZBV1 (IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.2e-04 Identity = 25/90 (27.78%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of Cucsat.G5932 vs. NCBI nr
Match: XP_011656519.1 (uncharacterized protein LOC101211044 [Cucumis sativus] >KGN45949.1 hypothetical protein Csa_005294 [Cucumis sativus]) HSP 1 Score: 182 bits (463), Expect = 3.54e-54 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Cucsat.G5932 vs. NCBI nr
Match: XP_008445650.1 (PREDICTED: uncharacterized protein LOC103488606 [Cucumis melo]) HSP 1 Score: 177 bits (449), Expect = 2.36e-52 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Cucsat.G5932 vs. NCBI nr
Match: XP_038884116.1 (uncharacterized protein LOC120075040 [Benincasa hispida]) HSP 1 Score: 174 bits (440), Expect = 1.43e-50 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Cucsat.G5932 vs. NCBI nr
Match: XP_022139373.1 (uncharacterized protein LOC111010325 [Momordica charantia]) HSP 1 Score: 157 bits (398), Expect = 3.78e-44 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cucsat.G5932 vs. NCBI nr
Match: XP_022921602.1 (uncharacterized protein LOC111429814 [Cucurbita moschata] >KAG7032508.1 IST1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155 bits (391), Expect = 3.80e-43 Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy TrEMBL
Match: A0A0A0KAU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032470 PE=3 SV=1) HSP 1 Score: 182 bits (463), Expect = 1.71e-54 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy TrEMBL
Match: A0A1S3BD83 (uncharacterized protein LOC103488606 OS=Cucumis melo OX=3656 GN=LOC103488606 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 1.14e-52 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy TrEMBL
Match: A0A6J1CFG6 (uncharacterized protein LOC111010325 OS=Momordica charantia OX=3673 GN=LOC111010325 PE=3 SV=1) HSP 1 Score: 157 bits (398), Expect = 1.83e-44 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy TrEMBL
Match: A0A6J1E0Z0 (uncharacterized protein LOC111429814 OS=Cucurbita moschata OX=3662 GN=LOC111429814 PE=3 SV=1) HSP 1 Score: 155 bits (391), Expect = 1.84e-43 Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cucsat.G5932 vs. ExPASy TrEMBL
Match: A0A6J1E4E5 (uncharacterized protein LOC111429823 OS=Cucurbita moschata OX=3662 GN=LOC111429823 PE=3 SV=1) HSP 1 Score: 152 bits (383), Expect = 2.84e-42 Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 0
BLAST of Cucsat.G5932 vs. TAIR 10
Match: AT1G13340.1 (Regulator of Vps4 activity in the MVB pathway protein ) HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Cucsat.G5932 vs. TAIR 10
Match: AT1G34220.1 (Regulator of Vps4 activity in the MVB pathway protein ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 25/93 (26.88%), Postives = 52/93 (55.91%), Query Frame = 0
BLAST of Cucsat.G5932 vs. TAIR 10
Match: AT1G34220.2 (Regulator of Vps4 activity in the MVB pathway protein ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 25/93 (26.88%), Postives = 52/93 (55.91%), Query Frame = 0
BLAST of Cucsat.G5932 vs. TAIR 10
Match: AT2G19710.1 (Regulator of Vps4 activity in the MVB pathway protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 29/90 (32.22%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cucsat.G5932 vs. TAIR 10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06 Identity = 28/91 (30.77%), Postives = 51/91 (56.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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