Cucsat.G3266 (gene) Cucumber (B10) v3

Overview
NameCucsat.G3266
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionprotein OSB2, chloroplastic-like
Locationctg1041: 4001476 .. 4006413 (+)
RNA-Seq ExpressionCucsat.G3266
SyntenyCucsat.G3266
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGGATTCAATAAATATAAAAATCCAAAACCCTTTGCTCAAAACGTCAAACCCTCGCCCAAGAGTTTGGCGCGAACAATAAAACACAAGTCCAAGATAAGAGCCATGGTAATGGCGTTAGAGCAAACCCTAATTCTTTCATCTTCATTGTCATCAAAGAATTCTATCTTCTCCATCCCTAGAAACCAATTACCAATCTCTTCTTTCTTCCCTTTTCACTCCTATCTAAACCCTCCTAAACACCTCCGTTTCCCTGCTCCTTTCCCAAAATGCTCCGCTATGGAAAACTACACCAATTACTCTGCTGTAACCTACCCCAAACCTTCCCAAATTCCATGGAAGAAGGAGCTTAGTAACTCCGTCACTCTCATTGGGACCGTTGGTCTGCCTGTCGAGCTCAAGCACCTGCCATCTGGCAAGGATGTGGCCTGGACGCGACTTGCTGTTTGGAAGTCTTCTACTGAAACATCTTGGTACTAGTCTATTGTTTCATTTCGAAATGGGCTTTTTTATTGTTGCATTTCTATTGAAGATTGGATGATAATAAGTTGAAGAATAGTTTTTTAGTTGTGGTTAATAATATGGACATTTCTTAGGACTATGGTTATAGACTATATTTCTGTCTACGTCGAGTGCCATTTCTAAATTGTTGTCCCGATTTCGATAGGATGTGGAAACCATATGAATTCTTAAATGAGCCTTTGCTTTATGTAAGTGACGCCTTTCCGTGTTTTAACAAGTTTGGAAGGAAGTTACTTGAATGCCTCTGTTTGGGCGTTGAGAGTGAGGATGTGTGGAATTTGACACATTTTAGATTGTAAGGTTAAGTTTCAGAACCACACCATTTTTATTTTTACCAGACGAATTGTATCAATTCATTAGCCATAAGAGAAGCACCCAAAATTATCTGTCTATTCCCAACAAGACCAAGCTTCTTAGGCGCAATGGTGGTACGCAGGGCCACTTTCGGACCATTGGATAAGACACAAGTAATGCTTTTATAGGCATATTTTAGAGTGTTATTCTCGGAAATTTATTCTACTTCTTTTTCATATAAATTTGCAGATCATATCAACGCTTACATTGGTGCATAGAATCTTACATTTTCTCTGGAAAGGGTGACCCCAATAAATGTCTGACAGGAGGATTATGTTACACTTAGTATGCAGAGAGTCAAAATTTTAAGCTGCATCGGTAGTGAATTGGTAAAATTCTTTAAGTTCTTAGCATTAACCTTGCTGCACATGACGCACCATGAAGAATAAAGCTAAGTGAACATACCTTTTTTTATAAATTTGCCATTCATATTGAGACCTCCCAAAGCTAGAATCCGAAAAAAGAACTTAATCTTTTCTCCGACCCTTCTATCTTCATGCTATACGACCTTCAAAAAGGCTTGATCAATGACAGCAGCTGCCGCTACCAATTTACCAAAAATGCAACGTTAGAGTTTTTGGTGTAGTTTGTCTTAATAATCAAGCACAAATTCTTCTATTCTCTATCAAGAGTACTCCAAAATCTCAATAATGGAGAAACTACTCAATCTCCCCATTATTTTAATTTCCTTCTAATGTTGAGATTCCACCTTCCTTTGTAGTTGTTCCTAGAATCTTTGACTTGTAACCATCAGAATTTGCAAAGGGTTGAAGTTTAGAAAATAGTGAATGGGTAGGAAGTATGGATGATGGGACCAGGGAACGTTGACAGATCTAACCAAAGAATCCTCACCAACTTTAAATGTCAAGAAATAGAAGTAAAACCATGAGCATATTTTCACTTATGGGCACATAATTTGTCTTATAGCTTTCTACATATTTGTTCATTGGCAAAGCTCCTCAGTGACAGAACCTCCCTTCAAGAGAGCTAAGTGCATGAGCTCGTGCATAGGTACAATTTTTTAATAAATGGCCTTGCACTTTAGGCTCAGTGGGCTATTATGCTCCAACACACTTTTGGGAAGATACACAAGTCTTTGTTGCGACCGGGAATTTCATTCAAGCCACGTAGTCCAAAGGAAAGCAAACACAGAGTTCAGCGAAAGAATCTTCTTTTCCTTCTTAAATGGATGACCATTGAAAAGGTGTGATAGGATGTCTCGATTATGTTGAGGGAGGGTTGTATGCCAACCAAAATCAGCCAGGATGAAATTCCAAAAACTTTGGTCCGGTTTCCGTGAAAAGACAGATGAGAATGGGTCTCTCCACCATTCTTGTACATATGATAGAAGCTTGTGGAGATACCAATCCATGGGCACTGAGTTTGTAGTTTGTCTTAAGCGTTGAGGAAACTGTGGCTCAATTCCCAAATGAGAAACTTAACTTTCTTAGGATAACTACTACCCCAAATAGATTGGTAAATATGCTTGAATGTTGCATCATCTTTATAGGTCAGTGAGTTTTAAACTGCAGAACTTTAAAACTTTGGTTTCTTGAGAGATACAGCGTGGCATTTCAAACTTGTTGCGTTTGCATGTAATGACAATTAGAAGTGATTCAGATTAGGATTTTGCTCTTTCAGGATAGGTTTAACATTCTGGGATGAATTGGCACATATTGCTTCTCAGCACGTCCAGAAAGGCAACCAGATATATGTATCTGGTCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTACAAGGTTTTGATGTCCTTGTTCACACCGTTCCATGGTTTTCTATTCATCAAGAAGTAGATTCCAACACTTTCATATCTTTTGCAGGTAGTGGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCCCATTACGACCAAGACTCTAATTCCATAATGGCAGGCATGGGATAATTCCCTAATTTAACATTATTGATTGACGCTTTACTTTGCTTCAAAATCTTATTATTTGGTGTCCTATCACATTATTCACAGGGAGAAAGCCCGGCAGTGGTGCTGTTGATAACACAGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCTAATCCCGTTGACTGGTGGGACAATAGGAAGAATAAGGTACATGATTAATTCTCTTGCAATTTCTGGGATTCAACTATCTCGTTTTTGGATTCAAATGTTCTTAACATGGACCAAGTTGTCTTTCTGTTTTTATTCAAATTGATGCATGGAAAAACCTTGGGAACTTACAACGAACTGCATGATAGAATAGCATACATTTTATGTATGTTATATTTCCATTGCAGAGAGCAGGCCTCATAAATGGTTACATTTTCTTAACTATTCGAGTGATACACCCCCAAGGGGGTGAGAATACGGAAAGAAAAAGCAAAATCAAGAACTTTGAGACAAATATAAGCAAAGTAATAGAGGTCAGCTCACAGAACAATTAATCTGTTAAAAAACAGTGGATTTATCCAATAATTTATGCCTTCTTTGAACCAATAACTTTTAGAGCTTGCAAATTGTGGTCGAAGTGAAGACTCTACAAACCACTCCAAAAGCAGCTGCAGCAACTGAAAACGAGACCAAAAAAACATTAAAGAAATTTCATCTAGAACTTGCTGAGAAAAACGTTGTATGGATAATCGCGGGATTTAATATTGTAATATCAATGAGACACTACCATTTAACATATCATGAGGAGAGTAAGGTTATTTAACAGGAAAGGTACCGAGAGCAACAACAGCCACAAGACTAATCCTCAAGGAAAGTAACTGAGGCTGTAAAGATTTGTGGAAGGCCCAAAACAAGAGCAATCAAATTGAAACAGAGCAAACTAATAAAAACTTATCAAACGCTGAAAAAGGCAGAAGCCGCATCAAAGGAGTCAGTATTAGGCATAGAAAAAGAAAACCTCCAAACTCAAACAAACTCAGATGCGCTCAGCCACGAAGACAAGTTGAGATCTCTCGGAGCCCATGTACTTGAAAACTTGAATTTTGATTTTTATCTCATAAACCTTAAGACCACAGACTCTGAAAAAGGAGGAAAAATTATAATCATCTTCAATGTGTTCTCATGAATGAAGGAGAGGAGGGGCGTCATATCAGACATTATTTGGAGGCCTAATGTCTTCTTGAAAGGGGTTACGTAGAACCCTATCAATAGCTTGTTTAGATGAAATTTTATCATTTCAATCGTCAATTAGAAAATTGAAATCCAATTCCTCACTCACAAGACTCCCTTTTGCTTGACCCATTTGTTGAAAAAATCACACTTTGACAGACCGTTATTTCAACTAAGAGGCTGAAATTGTGGAGGAAAACTGGGGTGAGTCGAGTTTGAGCCTACCTAGTCTCAGGAAATCTCTTTCATTTAGCTAAAAGCCTAAAAGAGTACTTAAGCTTCAAATTTTTAAAGGTATGTAGAAGGTAAACCAAGTTAAAGCAACGCAGAGAAGTCACCAACAGCCTTTTTTGGCTATCATAGATCTAAATATTATTATTTTTTCTATGCATGAAATGGAATGGCAGGCCTCAATGATTTAAGAGAAAATCAAGGAAATAGTAGCCTCCTTTTGCAGGCCATAGACATTCCAAAAGTTACCTTTTGTTAGTATTTGTAGGTTTCCTTCACTGTATAGTTCACTTGAATCCTTGTTGAGATATAAGATGCACTCTTGAATGTTAATACTTTATTGGCATTTTGGTTCTGGTTGCAGAAGAACCCAAAATATCCTGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTATAATCCACCTTGGGTGAAGTCTCAGCTTGCATTATTAGACATGAGAATGGGTTCTCTTGATGATCAGGAAGCCAAAATGGCCAACTTCGTAACTAGTTTTGATTTTCCATCTTACTAAACTGACTTTGGATTGCTTTAAATTGTTTCCAAGAGGGTGTAAACCAAATATATTAGTAAGATTCTTTTGTGATGTCTGGCTCGTATAGTTTGTAATTTGGTGCATTGTATATTGGTTGTTAGTAA

Coding sequence (CDS)

GTTGGATTCAATAAATATAAAAATCCAAAACCCTTTGCTCAAAACGTCAAACCCTCGCCCAAGAGTTTGGCGCGAACAATAAAACACAAGTCCAAGATAAGAGCCATGGTAATGGCGTTAGAGCAAACCCTAATTCTTTCATCTTCATTGTCATCAAAGAATTCTATCTTCTCCATCCCTAGAAACCAATTACCAATCTCTTCTTTCTTCCCTTTTCACTCCTATCTAAACCCTCCTAAACACCTCCGTTTCCCTGCTCCTTTCCCAAAATGCTCCGCTATGGAAAACTACACCAATTACTCTGCTGTAACCTACCCCAAACCTTCCCAAATTCCATGGAAGAAGGAGCTTAGTAACTCCGTCACTCTCATTGGGACCGTTGGTCTGCCTGTCGAGCTCAAGCACCTGCCATCTGGCAAGGATGTGGCCTGGACGCGACTTGCTGTTTGGAAGTCTTCTACTGAAACATCTTGA

Protein sequence

VGFNKYKNPKPFAQNVKPSPKSLARTIKHKSKIRAMVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS
Homology
[Close]
BLAST of Cucsat.G3266 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 246 bits (629), Expect = 3.05e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 122

[Close]
BLAST of Cucsat.G3266 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 8.71e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]
BLAST of Cucsat.G3266 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 228 bits (580), Expect = 8.71e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]
BLAST of Cucsat.G3266 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 196 bits (499), Expect = 1.43e-59
Identity = 100/122 (81.97%), Postives = 110/122 (90.16%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MALEQTL LSSSL SKNSIFSIPRN+L ISSF+PF S LN PKHLRF   FPKCSAME
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY++YS  TYPKPS+IPWKK+LSNSV+LIGTVG+PVELKHL +GKDVAWTRLAVWKSSTE
Sbjct: 61  NYSSYSP-TYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]
BLAST of Cucsat.G3266 vs. NCBI nr
Match: XP_023549001.1 (protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180 bits (457), Expect = 2.79e-53
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+E+TLILSSS  SKN IFS  RN+L I+SF P  S+LN  KH RF   FPKC AME
Sbjct: 1   MIMAVEKTLILSSSFLSKNCIFSFSRNKLRIASFSPLLSHLNAAKHSRFATRFPKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIGTVG PVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 1.48e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 122

[Close]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.22e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.22e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match: A0A6J1JVR7 (protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 2.02e-47
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+E+TL LSSS  SKN IFS  RN+  ++SF  F S+LN  KH RF   F KC AME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIGTVG PVELKHLPSGKDVA TRLAVWKSSTE
Sbjct: 61  NYSIYS-VSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match: A0A6J1GQ31 (protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 5.70e-47
Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0 

Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+++TL LSSS  SK+ IFS  RN+  I+SF PF S+LN  KH RF   FPKC AME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIG VG PVELK LP+GKDVA TRLAVWKSSTE
Sbjct: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

The following BLAST results are available for this feature:
BLAST of Cucsat.G3266 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G3266 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146958.13.05e-79100.00protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica... [more]
KAA0059696.18.71e-7292.62protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v... [more]
XP_008451268.18.71e-7292.62PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo][more]
XP_038896738.11.43e-5981.97protein OSB2, chloroplastic-like [Benincasa hispida][more]
XP_023549001.12.79e-5376.23protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4W21.48e-79100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1[more]
A0A5D3DR474.22e-7292.62Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P... [more]
A0A1S3BRV34.22e-7292.62protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV... [more]
A0A6J1JVR72.02e-4772.13protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=... [more]
A0A6J1GQ315.70e-4770.49protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 P... [more]
BLAST of Cucsat.G3266 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10302:SF15OS03G0633900 PROTEINcoord: 65..157
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 65..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G3266.T12Cucsat.G3266.T12mRNA
Cucsat.G3266.T13Cucsat.G3266.T13mRNA
Cucsat.G3266.T10Cucsat.G3266.T10mRNA
Cucsat.G3266.T11Cucsat.G3266.T11mRNA
Cucsat.G3266.T15Cucsat.G3266.T15mRNA
Cucsat.G3266.T8Cucsat.G3266.T8mRNA
Cucsat.G3266.T9Cucsat.G3266.T9mRNA
Cucsat.G3266.T1Cucsat.G3266.T1mRNA
Cucsat.G3266.T2Cucsat.G3266.T2mRNA
Cucsat.G3266.T3Cucsat.G3266.T3mRNA
Cucsat.G3266.T4Cucsat.G3266.T4mRNA
Cucsat.G3266.T5Cucsat.G3266.T5mRNA
Cucsat.G3266.T6Cucsat.G3266.T6mRNA
Cucsat.G3266.T7Cucsat.G3266.T7mRNA
Cucsat.G3266.T14Cucsat.G3266.T14mRNA
Cucsat.G3266.T19Cucsat.G3266.T19mRNA
Cucsat.G3266.T17Cucsat.G3266.T17mRNA
Cucsat.G3266.T18Cucsat.G3266.T18mRNA
Cucsat.G3266.T16Cucsat.G3266.T16mRNA
Cucsat.G3266.T20Cucsat.G3266.T20mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006264 mitochondrial DNA replication
biological_process GO:0051096 positive regulation of helicase activity
biological_process GO:0006260 DNA replication
cellular_component GO:0042645 mitochondrial nucleoid
molecular_function GO:0003697 single-stranded DNA binding