Cucsat.G3266.T11 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3266.T11
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein OSB2, chloroplastic-like
Location	ctg1041: 4001476 .. 4006497 (+)
RNA-Seq Expression	Cucsat.G3266.T11
Synteny	Cucsat.G3266.T11

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGATTCAATAAATATAAAAATCCAAAACCCTTTGCTCAAAACGTCAAACCCTCGCCCAAGAGTTTGGCGCGAACAATAAAACACAAGTCCAAGATAAGAGCCATGGTAATGGCGTTAGAGCAAACCCTAATTCTTTCATCTTCATTGTCATCAAAGAATTCTATCTTCTCCATCCCTAGAAACCAATTACCAATCTCTTCTTTCTTCCCTTTTCACTCCTATCTAAACCCTCCTAAACACCTCCGTTTCCCTGCTCCTTTCCCAAAATGCTCCGCTATGGAAAACTACACCAATTACTCTGCTGTAACCTACCCCAAACCTTCCCAAATTCCATGGAAGAAGGAGCTTAGTAACTCCGTCACTCTCATTGGGACCGTTGGTCTGCCTGTCGAGCTCAAGCACCTGCCATCTGGCAAGGATGTGGCCTGGACGCGACTTGCTGTTTGGAAGTCTTCTACTGAAACATCTTGGTACTAGTCTATTGTTTCATTTCGAAATGGGCTTTTTTATTGTTGCATTTCTATTGAAGATTGGATGATAATAAGTTGAAGAATAGTTTTTTAGTTGTGGTTAATAATATGGACATTTCTTAGGACTATGGTTATAGACTATATTTCTGTCTACGTCGAGTGCCATTTCTAAATTGTTGTCCCGATTTCGATAGGATGTGGAAACCATATGAATTCTTAAATGAGCCTTTGCTTTATGTAAGTGACGCCTTTCCGTGTTTTAACAAGTTTGGAAGGAAGTTACTTGAATGCCTCTGTTTGGGCGTTGAGAGTGAGGATGTGTGGAATTTGACACATTTTAGATTGTAAGGTTAAGTTTCAGAACCACACCATTTTTATTTTTACCAGACGAATTGTATCAATTCATTAGCCATAAGAGAAGCACCCAAAATTATCTGTCTATTCCCAACAAGACCAAGCTTCTTAGGCGCAATGGTGGTACGCAGGGCCACTTTCGGACCATTGGATAAGACACAAGTAATGCTTTTATAGGCATATTTTAGAGTGTTATTCTCGGAAATTTATTCTACTTCTTTTTCATATAAATTTGCAGATCATATCAACGCTTACATTGGTGCATAGAATCTTACATTTTCTCTGGAAAGGGTGACCCCAATAAATGTCTGACAGGAGGATTATGTTACACTTAGTATGCAGAGAGTCAAAATTTTAAGCTGCATCGGTAGTGAATTGGTAAAATTCTTTAAGTTCTTAGCATTAACCTTGCTGCACATGACGCACCATGAAGAATAAAGCTAAGTGAACATACCTTTTTTTATAAATTTGCCATTCATATTGAGACCTCCCAAAGCTAGAATCCGAAAAAAGAACTTAATCTTTTCTCCGACCCTTCTATCTTCATGCTATACGACCTTCAAAAAGGCTTGATCAATGACAGCAGCTGCCGCTACCAATTTACCAAAAATGCAACGTTAGAGTTTTTGGTGTAGTTTGTCTTAATAATCAAGCACAAATTCTTCTATTCTCTATCAAGAGTACTCCAAAATCTCAATAATGGAGAAACTACTCAATCTCCCCATTATTTTAATTTCCTTCTAATGTTGAGATTCCACCTTCCTTTGTAGTTGTTCCTAGAATCTTTGACTTGTAACCATCAGAATTTGCAAAGGGTTGAAGTTTAGAAAATAGTGAATGGGTAGGAAGTATGGATGATGGGACCAGGGAACGTTGACAGATCTAACCAAAGAATCCTCACCAACTTTAAATGTCAAGAAATAGAAGTAAAACCATGAGCATATTTTCACTTATGGGCACATAATTTGTCTTATAGCTTTCTACATATTTGTTCATTGGCAAAGCTCCTCAGTGACAGAACCTCCCTTCAAGAGAGCTAAGTGCATGAGCTCGTGCATAGGTACAATTTTTTAATAAATGGCCTTGCACTTTAGGCTCAGTGGGCTATTATGCTCCAACACACTTTTGGGAAGATACACAAGTCTTTGTTGCGACCGGGAATTTCATTCAAGCCACGTAGTCCAAAGGAAAGCAAACACAGAGTTCAGCGAAAGAATCTTCTTTTCCTTCTTAAATGGATGACCATTGAAAAGGTGTGATAGGATGTCTCGATTATGTTGAGGGAGGGTTGTATGCCAACCAAAATCAGCCAGGATGAAATTCCAAAAACTTTGGTCCGGTTTCCGTGAAAAGACAGATGAGAATGGGTCTCTCCACCATTCTTGTACATATGATAGAAGCTTGTGGAGATACCAATCCATGGGCACTGAGTTTGTAGTTTGTCTTAAGCGTTGAGGAAACTGTGGCTCAATTCCCAAATGAGAAACTTAACTTTCTTAGGATAACTACTACCCCAAATAGATTGGTAAATATGCTTGAATGTTGCATCATCTTTATAGGTCAGTGAGTTTTAAACTGCAGAACTTTAAAACTTTGGTTTCTTGAGAGATACAGCGTGGCATTTCAAACTTGTTGCGTTTGCATGTAATGACAATTAGAAGTGATTCAGATTAGGATTTTGCTCTTTCAGGATAGGTTTAACATTCTGGGATGAATTGGCACATATTGCTTCTCAGCACGTCCAGAAAGGCAACCAGATATATGTATCTGGTCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTACAAGGTTTTGATGTCCTTGTTCACACCGTTCCATGGTTTTCTATTCATCAAGAAGTAGATTCCAACACTTTCATATCTTTTGCAGGTAGTGGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCCCATTACGACCAAGACTCTAATTCCATAATGGCAGGCATGGGATAATTCCCTAATTTAACATTATTGATTGACGCTTTACTTTGCTTCAAAATCTTATTATTTGGTGTCCTATCACATTATTCACAGGGAGAAAGCCCGGCAGTGGTGCTGTTGATAACACAGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCTAATCCCGTTGACTGGTGGGACAATAGGAAGAATAAGGTACATGATTAATTCTCTTGCAATTTCTGGGATTCAACTATCTCGTTTTTGGATTCAAATGTTCTTAACATGGACCAAGTTGTCTTTCTGTTTTTATTCAAATTGATGCATGGAAAAACCTTGGGAACTTACAACGAACTGCATGATAGAATAGCATACATTTTATGTATGTTATATTTCCATTGCAGAGAGCAGGCCTCATAAATGGTTACATTTTCTTAACTATTCGAGTGATACACCCCCAAGGGGGTGAGAATACGGAAAGAAAAAGCAAAATCAAGAACTTTGAGACAAATATAAGCAAAGTAATAGAGGTCAGCTCACAGAACAATTAATCTGTTAAAAAACAGTGGATTTATCCAATAATTTATGCCTTCTTTGAACCAATAACTTTTAGAGCTTGCAAATTGTGGTCGAAGTGAAGACTCTACAAACCACTCCAAAAGCAGCTGCAGCAACTGAAAACGAGACCAAAAAAACATTAAAGAAATTTCATCTAGAACTTGCTGAGAAAAACGTTGTATGGATAATCGCGGGATTTAATATTGTAATATCAATGAGACACTACCATTTAACATATCATGAGGAGAGTAAGGTTATTTAACAGGAAAGGTACCGAGAGCAACAACAGCCACAAGACTAATCCTCAAGGAAAGTAACTGAGGCTGTAAAGATTTGTGGAAGGCCCAAAACAAGAGCAATCAAATTGAAACAGAGCAAACTAATAAAAACTTATCAAACGCTGAAAAAGGCAGAAGCCGCATCAAAGGAGTCAGTATTAGGCATAGAAAAAGAAAACCTCCAAACTCAAACAAACTCAGATGCGCTCAGCCACGAAGACAAGTTGAGATCTCTCGGAGCCCATGTACTTGAAAACTTGAATTTTGATTTTTATCTCATAAACCTTAAGACCACAGACTCTGAAAAAGGAGGAAAAATTATAATCATCTTCAATGTGTTCTCATGAATGAAGGAGAGGAGGGGCGTCATATCAGACATTATTTGGAGGCCTAATGTCTTCTTGAAAGGGGTTACGTAGAACCCTATCAATAGCTTGTTTAGATGAAATTTTATCATTTCAATCGTCAATTAGAAAATTGAAATCCAATTCCTCACTCACAAGACTCCCTTTTGCTTGACCCATTTGTTGAAAAAATCACACTTTGACAGACCGTTATTTCAACTAAGAGGCTGAAATTGTGGAGGAAAACTGGGGTGAGTCGAGTTTGAGCCTACCTAGTCTCAGGAAATCTCTTTCATTTAGCTAAAAGCCTAAAAGAGTACTTAAGCTTCAAATTTTTAAAGGTATGTAGAAGGTAAACCAAGTTAAAGCAACGCAGAGAAGTCACCAACAGCCTTTTTTGGCTATCATAGATCTAAATATTATTATTTTTTCTATGCATGAAATGGAATGGCAGGCCTCAATGATTTAAGAGAAAATCAAGGAAATAGTAGCCTCCTTTTGCAGGCCATAGACATTCCAAAAGTTACCTTTTGTTAGTATTTGTAGGTTTCCTTCACTGTATAGTTCACTTGAATCCTTGTTGAGATATAAGATGCACTCTTGAATGTTAATACTTTATTGGCATTTTGGTTCTGGTTGCAGAAGAACCCAAAATATCCTGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTATAATCCACCTTGGGTGAAGTCTCAGCTTGCATTATTAGACATGAGAATGGGTTCTCTTGATGATCAGGAAGCCAAAATGGCCAACTTCGTAACTAGTTTTGATTTTCCATCTTACTAAACTGACTTTGGATTGCTTTAAATTGTTTCCAAGAGGGTGTAAACCAAATATATTAGTAAGATTCTTTTGTGATGTCTGGCTCGTATAGTTTGTAATTTGGTGCATTGTATATTGGTTGTTAGTAATTCAAATATTTCGTCAGTCTCTAGGATCAGTGCCTTTTATGGAAGAAAAAAAATACATGGAGTTCATCCCACAGGATTCTCTCT

Coding sequence (CDS)

GTTGGATTCAATAAATATAAAAATCCAAAACCCTTTGCTCAAAACGTCAAACCCTCGCCCAAGAGTTTGGCGCGAACAATAAAACACAAGTCCAAGATAAGAGCCATGGTAATGGCGTTAGAGCAAACCCTAATTCTTTCATCTTCATTGTCATCAAAGAATTCTATCTTCTCCATCCCTAGAAACCAATTACCAATCTCTTCTTTCTTCCCTTTTCACTCCTATCTAAACCCTCCTAAACACCTCCGTTTCCCTGCTCCTTTCCCAAAATGCTCCGCTATGGAAAACTACACCAATTACTCTGCTGTAACCTACCCCAAACCTTCCCAAATTCCATGGAAGAAGGAGCTTAGTAACTCCGTCACTCTCATTGGGACCGTTGGTCTGCCTGTCGAGCTCAAGCACCTGCCATCTGGCAAGGATGTGGCCTGGACGCGACTTGCTGTTTGGAAGTCTTCTACTGAAACATCTTGA

Protein sequence

VGFNKYKNPKPFAQNVKPSPKSLARTIKHKSKIRAMVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS

Homology

[Close]

BLAST of Cucsat.G3266.T11 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 246 bits (629), Expect = 3.05e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 122

[Close]

BLAST of Cucsat.G3266.T11 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 8.71e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]

BLAST of Cucsat.G3266.T11 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 228 bits (580), Expect = 8.71e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]

BLAST of Cucsat.G3266.T11 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 196 bits (499), Expect = 1.43e-59
Identity = 100/122 (81.97%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MALEQTL LSSSL SKNSIFSIPRN+L ISSF+PF S LN PKHLRF   FPKCSAME
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY++YS  TYPKPS+IPWKK+LSNSV+LIGTVG+PVELKHL +GKDVAWTRLAVWKSSTE
Sbjct: 61  NYSSYSP-TYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]

BLAST of Cucsat.G3266.T11 vs. NCBI nr
Match: XP_023549001.1 (protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180 bits (457), Expect = 2.79e-53
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+E+TLILSSS  SKN IFS  RN+L I+SF P  S+LN  KH RF   FPKC AME
Sbjct: 1   MIMAVEKTLILSSSFLSKNCIFSFSRNKLRIASFSPLLSHLNAAKHSRFATRFPKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIGTVG PVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 1.48e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 122

[Close]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.22e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.22e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M +ALEQTL LSSS SSKNSIFSIPRNQL ISSFFPFHSYLNPPKHLRF   FPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NYTNYSAVTYPKPS+IPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 156 TS 157
           TS
Sbjct: 123 TS 124

[Close]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL
Match: A0A6J1JVR7 (protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 2.02e-47
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+E+TL LSSS  SKN IFS  RN+  ++SF  F S+LN  KH RF   F KC AME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIGTVG PVELKHLPSGKDVA TRLAVWKSSTE
Sbjct: 61  NYSIYS-VSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

[Close]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL
Match: A0A6J1GQ31 (protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 5.70e-47
Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 36  MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 95
           M+MA+++TL LSSS  SK+ IFS  RN+  I+SF PF S+LN  KH RF   FPKC AME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 96  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 155
           NY+ YS V+YPKPS+IPWKKELSNSV+LIG VG PVELK LP+GKDVA TRLAVWKSSTE
Sbjct: 61  NYSTYS-VSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTE 120

Query: 156 TS 157
           TS
Sbjct: 121 TS 121

The following BLAST results are available for this feature:

BLAST of Cucsat.G3266.T11 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3266.T11 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146958.1	3.05e-79	100.00	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
KAA0059696.1	8.71e-72	92.62	protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v...	[more]
XP_008451268.1	8.71e-72	92.62	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
XP_038896738.1	1.43e-59	81.97	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_023549001.1	2.79e-53	76.23	protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W2	1.48e-79	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A5D3DR47	4.22e-72	92.62	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A1S3BRV3	4.22e-72	92.62	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A6J1JVR7	2.02e-47	72.13	protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=...	[more]
A0A6J1GQ31	5.70e-47	70.49	protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 P...	[more]

BLAST of Cucsat.G3266.T11 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 65..157
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 65..157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3266	Cucsat.G3266	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3266.T11.E1	Cucsat.G3266.T11.E1	exon
Cucsat.G3266.T11.E2	Cucsat.G3266.T11.E2	exon
Cucsat.G3266.T11.E3	Cucsat.G3266.T11.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3266.T11.C1	Cucsat.G3266.T11.C1	CDS
Cucsat.G3266.T11.C2	Cucsat.G3266.T11.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3266.T11	Cucsat.G3266.T11-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding