Cucsat.G3013 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3013
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin ligase BIG BROTHER isoform X1
Location	ctg1041: 6523022 .. 6526276 (-)
RNA-Seq Expression	Cucsat.G3013
Synteny	Cucsat.G3013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTGGACCACCCTTTTATTTATTTATTTTTTCGAGAAAAATACAATCTTTTTCTTCTTTCTCTTTAGTTTATCGAAATAAATACAAGTAAAAAAAGAGAGAAACTTGTAAAATACCCATTTGCCATTTGAAGAAGATTTCAAAGCCCATTCCAAGCAGCTTAAAAACCTTCATTCATTTTGCAAAGAGATGGAAGAAAATGGATTATAGCCAGAAAACAAATTGAAGAACAAAGAAGGAAAGGAAGGGTACACAAAACCATATAACCCCATTTCCTTTCATTTTCATCTCTCTCTGCTAAGACTCTGCCAGAAATCAAGAGTTTTGGAGAGAGAGAGAAACAGAAAAAAAAAAAAAAAAAGGAGTTTTAGAGAGAGAGTTTAAGGTCATTCTTCCATTTTTCAAGCTTCTCTTGTACCTCATTTCTCAAGCCTTTATTTTTTGTTTGTTTGTTTGTTTGATAAGTTTTAGAAGAAGAAGCCTTTTTTTTTTGTTCTGTTTTTATTGTGGATATTATGAAGATTCTAATGAATACTGGGATCTGTACCTATTTATTTTTTGCTCATTTGTCTGTTTTTATCTGATTCTTAGGATTCTTTAACATCTTTAATACTCATTTGTCTACATTTGTCTAATTCCTTCAGATTTTTCCTCTGTCAGAGTGTGAAGAGTTTCTTGGGGAAGTTTCTGTTTGGCTATCAAGTAAGAAAAATCATAAGATTTTTCTTTGTGTTTTTCGTTTTGGAGACAAAAGAAGTTAAATGTAAGTTTTTCTTTTGGTTTTGTGTAATGTTCATGTTTGTTTTAAAGTTTTTTTTGAATGTTTTTAGGGTCTGTTTCCTATTTCATTGGATAGAAAATTTCAAATCTTCAATTTCCTTTGCTTTCTCATCTTTTCCTCTAAGTTTTATTATCAACCAAACAGATTGTTGTGGATAAGTTCATTCTAAAGCTTTGACAATGTAGGTTTTAAGTTCATTTCATATTTCATTTTGTTTGATATGTTATTTTCCTTTTGGTCTTTTTTGCAAATGTTACTGTGATTGTTGCTTAAGATGAATGAGGATAGACAAATGGAATTGCATTACATGGACACCGGCTTTCCTTACACGAATACAGAGAGCTTCATGGATTTCTTTCAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCTGTACCATTGCTCGATCAGGTAACAGAGCGGGTCATGAAAAACTGATGCAATTTATTTGTCAATGCTCGAGCTCGAGTTTTGTCATTTGAGAGAATAATATTGGAAATGCACGGTGATTTGTTTCTCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTACGGCCATTCGGAGGAAAGTCACCATCTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGCGATGAATGTCGAAATCCCCGAACCATCCTATGCGCCATCCGTGGAGGAAGATGTTGTAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATTTGATACCGAGTCTGTTTATTTCATACTTTTCAAAGCTAACAATGAGTTTGTCACTATCACATCGTCCTGTTGAATCGTTGGTACGTTTGGATCTTACCAGCATCTTGTTACCTTGTTTCCTGTTTTGCAGGTGATTTAAGCCATCGGGAGGAAACTAGTACGTCTCAAGTATGATGCTTTCTCCTTGATTTCGCAATATGCCTTATTTTTCTGTTATGACCATGATCTACTTAATGCTCCTTACGAACCGTGGCTTAGTAAAAAAATTATTTGGTATCCTTTCACGTAGTTCAGTAAATAATGAACTAGGGTTTCATCTTATTATCATCAAAGGTTGTAGAATGTTCATCAAATGTTATTACTCTTAAAGTCTTAGTTTATGTCAGAAAGTTTCTCTTTCTGATCAGTTTTGTGCCCAACGAAGTTCCATTGCTTTTGAACTATGGGAATAGGTTCCTTTTTTATTTGGTAGGGCTCATTGTATCAGTCTTCTTTTGTTCGTCTCTTCAGGTTACATGGCAAGATGAGATTGATCCTGACCACATGACTTATGAGGTATGATTTCAACTCTATCATTTACAAACCAGATTTGTTTAAGAACATGTTTTAAGAAATGTTCTGTAAATCTTCAATAGATTGCCCTATAGAAGTTGAGGCTGTTCTTCACTTGAAACCAATGTTTTATTGAGCGCATGATTATTTTGGTTTAAAGAAAAAGATTTTTAGCTCAATTATCAACTAGCCGCTAGTTTCTTATGGCCATATGAACTATGGTTGGTTGTCAAATAAATGGGATCCACAGAAGTTTATTGTATAAAACAGAAGAGTATAAAAGGACTGCCTTTAGCCATGACTGTGCAGATGATCTTATATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCTCGATGAGAGGTCAGTTTTTGACAAATGTTACATTTCAGTTATCTTGCACCATCTTTGTTAATCTGCTTTACTTGGTGGGTATATGAGAAGACTCCTGTCAGAATAACTTTGAATCATCTGTCAATAATCGGTCTGGTGTCAATGTAGATGACAGTTTCTATAAACCGAGATGTTTAATCGGTTTGGTGTCAATGTGTCTACACTGAAGTCATATGGATCCATTTTTCTGTCATAGTACACGTTAATACATTCACTTTGGTTTCTTTAGTTTTTAGTGTAGCAATGTTGAACTCGAACCTCTAACCAATGTTACGAATAAGATAGTCATATGAGACACAAGAAGATGTTTACATCTTGGTACTTTCTCGATACAGTATTCATTACTGGAATATTTGATTGTACTTGTTTTGTTTCAACTGCAGATGTGTGATTTGCCAAATGAGGTACAAGCGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTCAGTAATTTTCTTGGCATTCTCATATCATACTTCCACCATTTCTGTTCTAACTTGATGTTCTACCTCGTCACTCACCATCGTTTTTATCAGATATGTCCAATCTGCAACATCGAGGTGTTCGGAGATGGAAGCACGAATGCATCGGCCAGTGATAACTGACAGTAGATTTTGGAAGCTCTAACATTTTGTTCTTGTTCATCTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCTCCACATTTTGTAAATCTCTACTTAACTAAGCGAATCAAGTACACTCTAATCCTTACTCTCTCCCTCCCCACGCTTGCCTTATGATCAACAGAAAGAAAGAAAATGTAACCCCTCTTCTTAACTTGTTAACTGCTTAGCCTTAAGATTGAAGTCTAGTTATTTTCTTAGATTAAGATTAGATTATTTTGTAGTCATTTTACGGACTGGGGGTCGCCTCGAACTGCTTCAAATTAGGATGTTGTGGAGTTGGGGTGAGTTAGATTAGGTTAATATAGACGTTTTGGATCTAACCCAATTGTTCGAGTTACATATTTGTTCAATCTAAGTGACTCTTGTTAGTGAAAGACCATGAATTCATTTGATCATTTATTTCAAGTTTTGTAAAAGAAATAGTGAGAATGATATACTTTTCCAGACTTTACTTACCTGTTTTCACTTGTTTCTGTCAATTTATTTTTTGTATTGAATTTTGT

Coding sequence (CDS)

ATGAATGAGGATAGACAAATGGAATTGCATTACATGGACACCGGCTTTCCTTACACGAATACAGAGAGCTTCATGGATTTCTTTCAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCTGTACCATTGCTCGATCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTACGGCCATTCGGAGGAAAGTCACCATCTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGCGATGAATGTCGAAATCCCCGAACCATCCTATGCGCCATCCGTGGAGGAAGATGTTGTAGATGCTCATTCTATACCAGAAGAATGTGATTTAAGCCATCGGGAGGAAACTAGTACGTCTCAAGTTACATGGCAAGATGAGATTGATCCTGACCACATGACTTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCTCGATGAGAGATGTGTGATTTGCCAAATGAGGTACAAGCGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCAATCTGCAACATCGAGGTGTTCGGAGATGGAAGCACGAATGCATCGGCCAGTGATAACTGA

Protein sequence

MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAHSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN

Homology

[Close]

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.0e-33
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-19
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIK 63
           +ELL LG+ VGTESRGLS + I+ LP+ R K     ++   +E CVIC++ Y+  +  I 
Sbjct: 246 EELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNGTNESCVICRLDYEDDEDLIL 305

Query: 64  LPCKHFYHNKCITKWLTINKICPICNIEV 93
           LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 306 LPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 34/88 (38.64%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y  GD 
Sbjct: 572 MSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEGDD 631

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPIC 89
              L C H +H  C+ +WL +  +CPIC
Sbjct: 632 LGTLGCGHEFHTACVKQWLMLKNLCPIC 659

[Close]

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-10
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDER-CVICQMRYKRGD 60
           M  +ELL L E +G  S GLSEE+++ L   R K +S+     ++E  C ICQ  Y  GD
Sbjct: 573 MSYEELLALEERIGNVSTGLSEEEVTKLLKQR-KFSSWRLEASVEEEPCCICQEEYVDGD 632

Query: 61  KQIKLPCKHFYHNKCITKWLTINKICPIC 89
               L C H +H  C+ +WL +   CPIC
Sbjct: 633 DLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot
Match: Q6ZNA4 (E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 5.5e-10
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 4   QELLDLGESVGTESRGLSEEQIS--LLPTARCKLTS-FFSRKKL--------------DE 63
           +EL+ L E +G  +RG S+  I     P    K+T+ +FS++KL              +E
Sbjct: 881 EELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEE 940

Query: 64  RCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEV 93
           +C IC    + G+   +LPC H +H  C+ +WL  NK CPIC +++
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986

[Close]

BLAST of Cucsat.G3013 vs. NCBI nr
Match: XP_008461284.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo])

HSP 1 Score: 216 bits (549), Expect = 1.20e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]

BLAST of Cucsat.G3013 vs. NCBI nr
Match: TYK10442.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]

BLAST of Cucsat.G3013 vs. NCBI nr
Match: XP_008461282.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_008461283.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]

BLAST of Cucsat.G3013 vs. NCBI nr
Match: XP_011659453.1 (E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >KAE8646405.1 hypothetical protein Csa_015770 [Cucumis sativus])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]

BLAST of Cucsat.G3013 vs. NCBI nr
Match: KAA0058634.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 1.54e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 152 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 211

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 212 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 256

[Close]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL
Match: A0A0A0K8C4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 5.81e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL
Match: A0A1S3CES7 (E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 5.81e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL
Match: A0A1S3CED1 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.01e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL
Match: A0A5D3CGQ8 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00890 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.01e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL
Match: A0A5A7UTY6 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001030 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.46e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 152 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 211

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 212 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 256

[Close]

BLAST of Cucsat.G3013 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-34
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Cucsat.G3013 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-34
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Cucsat.G3013 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-20
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIK 63
           +ELL LG+ VGTESRGLS + I+ LP+ R K     ++   +E CVIC++ Y+  +  I 
Sbjct: 246 EELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNGTNESCVICRLDYEDDEDLIL 305

Query: 64  LPCKHFYHNKCITKWLTINKICPICNIEV 93
           LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 306 LPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]

BLAST of Cucsat.G3013 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTAR--CKLTSFF---SRKKL---DERCVICQ 60
           M  +EL +LG+SVG   +GLS+E+IS L T +   K  S++    +KK    D +C IC 
Sbjct: 179 MTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQCSICL 238

Query: 61  MRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVF 94
           M Y +GDK   LPCKH YH  CI++WL  NK+C IC  EV+
Sbjct: 239 MEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]

BLAST of Cucsat.G3013 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLD-ERCVICQMRYKRGDKQI 63
           +EL+ LG+ +G E+RGL+  +IS    A    T  FS  K + +RCV+CQM ++  +  +
Sbjct: 120 EELIALGDFIGVENRGLTPIEISTCLNAS---TYVFSHNKNEIDRCVVCQMEFEERESLV 179

Query: 64  KL-PCKHFYHNKCITKWLTINKICPIC 89
            L PC H YH++CITKWL   KICPIC
Sbjct: 180 VLRPCDHPYHSECITKWLETKKICPIC 203

The following BLAST results are available for this feature:

BLAST of Cucsat.G3013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L649	6.0e-33	62.89	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9LT17	4.9e-19	50.56	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
O49500	1.4e-10	38.64	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
Q7XTV7	1.9e-10	40.45	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q6ZNA4	5.5e-10	33.02	E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3	[more]

BLAST of Cucsat.G3013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461284.1	1.20e-68	97.14	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo]	[more]
TYK10442.1	1.45e-68	97.14	E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008461282.1	1.45e-68	97.14	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_0084612...	[more]
XP_011659453.1	1.45e-68	97.14	E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubi...	[more]
KAA0058634.1	1.54e-68	97.14	E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G3013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8C4	5.81e-69	97.14	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 P...	[more]
A0A1S3CES7	5.81e-69	97.14	E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A1S3CED1	7.01e-69	97.14	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A5D3CGQ8	7.01e-69	97.14	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7UTY6	7.46e-69	97.14	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Cucsat.G3013 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63530.1	4.3e-34	62.89	RING/U-box superfamily protein	[more]
AT3G63530.2	4.3e-34	62.89	RING/U-box superfamily protein	[more]
AT3G19910.1	3.5e-20	50.56	RING/U-box superfamily protein	[more]
AT5G52140.1	1.1e-18	46.53	RING/U-box superfamily protein	[more]
AT3G47180.1	3.4e-15	45.98	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46400:SF3	E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER	coord: 1..199
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3013.T3	Cucsat.G3013.T3	mRNA
Cucsat.G3013.T1	Cucsat.G3013.T1	mRNA
Cucsat.G3013.T10	Cucsat.G3013.T10	mRNA
Cucsat.G3013.T11	Cucsat.G3013.T11	mRNA
Cucsat.G3013.T2	Cucsat.G3013.T2	mRNA
Cucsat.G3013.T7	Cucsat.G3013.T7	mRNA
Cucsat.G3013.T4	Cucsat.G3013.T4	mRNA
Cucsat.G3013.T8	Cucsat.G3013.T8	mRNA
Cucsat.G3013.T13	Cucsat.G3013.T13	mRNA
Cucsat.G3013.T12	Cucsat.G3013.T12	mRNA
Cucsat.G3013.T5	Cucsat.G3013.T5	mRNA
Cucsat.G3013.T6	Cucsat.G3013.T6	mRNA
Cucsat.G3013.T9	Cucsat.G3013.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048437	floral organ development
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:1900057	positive regulation of leaf senescence
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity