Cucsat.G3013.T5 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G3013.T5
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionE3 ubiquitin ligase BIG BROTHER isoform X1
Locationctg1041: 6523022 .. 6526933 (-)
RNA-Seq ExpressionCucsat.G3013.T5
SyntenyCucsat.G3013.T5
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTTATATACTAAATTCTACAGTATAATTCACGTCAATATGTATATATATATATCTTTATCTTTGTTTTTCTTTTCTGAATTTTATTTTATTTTTCTTGAATAGTGTTTCTGACATAAAAACATGTTTGGCCAGCAAGAAAAATAAAATAAGATAAAATGAGGCCATGAACATAGAGTGGACCACCCTTTTATTTATTTATTTTTTCGAGAAAAATACAATCTTTTTCTTCTTTCTCTTTAGTTTATCGAAATAAATACAAGTAAAAAAAGAGAGAAACTTGTAAAATACCCATTTGCCATTTGAAGAAGATTTCAAAGCCCATTCCAAGCAGCTTAAAAACCTTCATTCATTTTGCAAAGAGATGGAAGAAAATGGATTATAGCCAGAAAACAAATTGAAGAACAAAGAAGGAAAGGAAGGGTACACAAAACCATATAACCCCATTTCCTTTCATTTTCATCTCTCTCTGCTAAGACTCTGCCAGAAATCAAGAGTTTTGGAGAGAGAGAGAAACAGAAAAAAAAAAAAAAAAAGGAGTTTTAGAGAGAGAGTTTAAGGTCATTCTTCCATTTTTCAAGCTTCTCTTGTACCTCATTTCTCAAGCCTTTATTTTTTGTTTGTTTGTTTGTTTGATAAGTTTTAGAAGAAGAAGCCTTTTTTTTTTGTTCTGTTTTTATTGTGGATATTATGAAGATTCTAATGAATACTGGGATCTGTACCTATTTATTTTTTGCTCATTTGTCTGTTTTTATCTGATTCTTAGGATTCTTTAACATCTTTAATACTCATTTGTCTACATTTGTCTAATTCCTTCAGATTTTTCCTCTGTCAGAGTGTGAAGAGTTTCTTGGGGAAGTTTCTGTTTGGCTATCAAGTAAGAAAAATCATAAGATTTTTCTTTGTGTTTTTCGTTTTGGAGACAAAAGAAGTTAAATGTAAGTTTTTCTTTTGGTTTTGTGTAATGTTCATGTTTGTTTTAAAGTTTTTTTTGAATGTTTTTAGGGTCTGTTTCCTATTTCATTGGATAGAAAATTTCAAATCTTCAATTTCCTTTGCTTTCTCATCTTTTCCTCTAAGTTTTATTATCAACCAAACAGATTGTTGTGGATAAGTTCATTCTAAAGCTTTGACAATGTAGGTTTTAAGTTCATTTCATATTTCATTTTGTTTGATATGTTATTTTCCTTTTGGTCTTTTTTGCAAATGTTACTGTGATTGTTGCTTAAGATGAATGAGGATAGACAAATGGAATTGCATTACATGGACACCGGCTTTCCTTACACGAATACAGAGAGCTTCATGGATTTCTTTCAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCTGTACCATTGCTCGATCAGGTAACAGAGCGGGTCATGAAAAACTGATGCAATTTATTTGTCAATGCTCGAGCTCGAGTTTTGTCATTTGAGAGAATAATATTGGAAATGCACGGTGATTTGTTTCTCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTACGGCCATTCGGAGGAAAGTCACCATCTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGCGATGAATGTCGAAATCCCCGAACCATCCTATGCGCCATCCGTGGAGGAAGATGTTGTAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATTTGATACCGAGTCTGTTTATTTCATACTTTTCAAAGCTAACAATGAGTTTGTCACTATCACATCGTCCTGTTGAATCGTTGGTACGTTTGGATCTTACCAGCATCTTGTTACCTTGTTTCCTGTTTTGCAGGTGATTTAAGCCATCGGGAGGAAACTAGTACGTCTCAAGTATGATGCTTTCTCCTTGATTTCGCAATATGCCTTATTTTTCTGTTATGACCATGATCTACTTAATGCTCCTTACGAACCGTGGCTTAGTAAAAAAATTATTTGGTATCCTTTCACGTAGTTCAGTAAATAATGAACTAGGGTTTCATCTTATTATCATCAAAGGTTGTAGAATGTTCATCAAATGTTATTACTCTTAAAGTCTTAGTTTATGTCAGAAAGTTTCTCTTTCTGATCAGTTTTGTGCCCAACGAAGTTCCATTGCTTTTGAACTATGGGAATAGGTTCCTTTTTTATTTGGTAGGGCTCATTGTATCAGTCTTCTTTTGTTCGTCTCTTCAGGTTACATGGCAAGATGAGATTGATCCTGACCACATGACTTATGAGGTATGATTTCAACTCTATCATTTACAAACCAGATTTGTTTAAGAACATGTTTTAAGAAATGTTCTGTAAATCTTCAATAGATTGCCCTATAGAAGTTGAGGCTGTTCTTCACTTGAAACCAATGTTTTATTGAGCGCATGATTATTTTGGTTTAAAGAAAAAGATTTTTAGCTCAATTATCAACTAGCCGCTAGTTTCTTATGGCCATATGAACTATGGTTGGTTGTCAAATAAATGGGATCCACAGAAGTTTATTGTATAAAACAGAAGAGTATAAAAGGACTGCCTTTAGCCATGACTGTGCAGATGATCTTATATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCTCGATGAGAGGTCAGTTTTTGACAAATGTTACATTTCAGTTATCTTGCACCATCTTTGTTAATCTGCTTTACTTGGTGGGTATATGAGAAGACTCCTGTCAGAATAACTTTGAATCATCTGTCAATAATCGGTCTGGTGTCAATGTAGATGACAGTTTCTATAAACCGAGATGTTTAATCGGTTTGGTGTCAATGTGTCTACACTGAAGTCATATGGATCCATTTTTCTGTCATAGTACACGTTAATACATTCACTTTGGTTTCTTTAGTTTTTAGTGTAGCAATGTTGAACTCGAACCTCTAACCAATGTTACGAATAAGATAGTCATATGAGACACAAGAAGATGTTTACATCTTGGTACTTTCTCGATACAGTATTCATTACTGGAATATTTGATTGTACTTGTTTTGTTTCAACTGCAGATGTGTGATTTGCCAAATGAGGTACAAGCGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTCAGTAATTTTCTTGGCATTCTCATATCATACTTCCACCATTTCTGTTCTAACTTGATGTTCTACCTCGTCACTCACCATCGTTTTTATCAGATATGTCCAATCTGCAACATCGAGGTGTTCGGAGATGGAAGCACGAATGCATCGGCCAGTGATAACTGACAGTAGATTTTGGAAGCTCTAACATTTTGTTCTTGTTCATCTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCTCCACATTTTGTAAATCTCTACTTAACTAAGCGAATCAAGTACACTCTAATCCTTACTCTCTCCCTCCCCACGCTTGCCTTATGATCAACAGAAAGAAAGAAAATGTAACCCCTCTTCTTAACTTGTTAACTGCTTAGCCTTAAGATTGAAGTCTAGTTATTTTCTTAGATTAAGATTAGATTATTTTGTAGTCATTTTACGGACTGGGGGTCGCCTCGAACTGCTTCAAATTAGGATGTTGTGGAGTTGGGGTGAGTTAGATTAGGTTAATATAGACGTTTTGGATCTAACCCAATTGTTCGAGTTACATATTTGTTCAATCTAAGTGACTCTTGTTAGTGAAAGACCATGAATTCATTTGATCATTTATTTCAAGTTTTGTAAAAGAAATAGTGAGAATGATATAC

Coding sequence (CDS)

ATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCTCGATGAGAGATGTGTGATTTGCCAAATGAGGTACAAGCGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCAATCTGCAACATCGAGGTGTTCGGAGATGGAAGCACGAATGCATCGGCCAGTGATAACTGA

Protein sequence

MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Homology
[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.0e-33
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-19
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0 

Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIK 63
           +ELL LG+ VGTESRGLS + I+ LP+ R K     ++   +E CVIC++ Y+  +  I 
Sbjct: 246 EELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNGTNESCVICRLDYEDDEDLIL 305

Query: 64  LPCKHFYHNKCITKWLTINKICPICNIEV 93
           LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 306 LPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 34/88 (38.64%), Postives = 45/88 (51.14%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y  GD 
Sbjct: 572 MSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEGDD 631

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPIC 89
              L C H +H  C+ +WL +  +CPIC
Sbjct: 632 LGTLGCGHEFHTACVKQWLMLKNLCPIC 659

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-10
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDER-CVICQMRYKRGD 60
           M  +ELL L E +G  S GLSEE+++ L   R K +S+     ++E  C ICQ  Y  GD
Sbjct: 573 MSYEELLALEERIGNVSTGLSEEEVTKLLKQR-KFSSWRLEASVEEEPCCICQEEYVDGD 632

Query: 61  KQIKLPCKHFYHNKCITKWLTINKICPIC 89
               L C H +H  C+ +WL +   CPIC
Sbjct: 633 DLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match: Q6ZNA4 (E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 5.5e-10
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0 

Query: 4   QELLDLGESVGTESRGLSEEQIS--LLPTARCKLTS-FFSRKKL--------------DE 63
           +EL+ L E +G  +RG S+  I     P    K+T+ +FS++KL              +E
Sbjct: 881 EELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEE 940

Query: 64  RCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEV 93
           +C IC    + G+   +LPC H +H  C+ +WL  NK CPIC +++
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986

[Close]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match: XP_008461284.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo])

HSP 1 Score: 216 bits (549), Expect = 1.20e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match: TYK10442.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match: XP_008461282.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_008461283.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match: XP_011659453.1 (E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >KAE8646405.1 hypothetical protein Csa_015770 [Cucumis sativus])

HSP 1 Score: 216 bits (549), Expect = 1.45e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match: KAA0058634.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 1.54e-68
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 152 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 211

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 212 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 256

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match: A0A0A0K8C4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 5.81e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match: A0A1S3CES7 (E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 5.81e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 144 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 203

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 204 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 248

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match: A0A1S3CED1 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.01e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match: A0A5D3CGQ8 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00890 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.01e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 150 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 210 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 254

[Close]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match: A0A5A7UTY6 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001030 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 7.46e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +ELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK
Sbjct: 152 MTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 211

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 105
           QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN
Sbjct: 212 QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGSTNASASDN 256

[Close]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-34
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-34
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDK 60
           M  +EL++LGE+VGTESRGLS+E I  LPT + K  S FSRK+  ERCVICQ++YK G++
Sbjct: 150 MTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGER 209

Query: 61  QIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 98
           Q+ LPCKH YH++CI+KWL+INK+CP+CN EVFG+ S
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-20
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0 

Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLDERCVICQMRYKRGDKQIK 63
           +ELL LG+ VGTESRGLS + I+ LP+ R K     ++   +E CVIC++ Y+  +  I 
Sbjct: 246 EELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNGTNESCVICRLDYEDDEDLIL 305

Query: 64  LPCKHFYHNKCITKWLTINKICPICNIEV 93
           LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 306 LPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 0 

Query: 1   MVLQELLDLGESVGTESRGLSEEQISLLPTAR--CKLTSFF---SRKKL---DERCVICQ 60
           M  +EL +LG+SVG   +GLS+E+IS L T +   K  S++    +KK    D +C IC 
Sbjct: 179 MTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQCSICL 238

Query: 61  MRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVF 94
           M Y +GDK   LPCKH YH  CI++WL  NK+C IC  EV+
Sbjct: 239 MEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0 

Query: 4   QELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKLD-ERCVICQMRYKRGDKQI 63
           +EL+ LG+ +G E+RGL+  +IS    A    T  FS  K + +RCV+CQM ++  +  +
Sbjct: 120 EELIALGDFIGVENRGLTPIEISTCLNAS---TYVFSHNKNEIDRCVVCQMEFEERESLV 179

Query: 64  KL-PCKHFYHNKCITKWLTINKICPIC 89
            L PC H YH++CITKWL   KICPIC
Sbjct: 180 VLRPCDHPYHSECITKWLETKKICPIC 203

The following BLAST results are available for this feature:
BLAST of Cucsat.G3013.T5 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L6496.0e-3362.89E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE... [more]
Q9LT174.9e-1950.56E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P... [more]
O495001.4e-1038.64E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV... [more]
Q7XTV71.9e-1040.45Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399... [more]
Q6ZNA45.5e-1033.02E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3[more]
BLAST of Cucsat.G3013.T5 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461284.11.20e-6897.14PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo][more]
TYK10442.11.45e-6897.14E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa][more]
XP_008461282.11.45e-6897.14PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_0084612... [more]
XP_011659453.11.45e-6897.14E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubi... [more]
KAA0058634.11.54e-6897.14E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G3013.T5 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8C45.81e-6997.14RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 P... [more]
A0A1S3CES75.81e-6997.14E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034999... [more]
A0A1S3CED17.01e-6997.14E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034999... [more]
A0A5D3CGQ87.01e-6997.14E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7UTY67.46e-6997.14E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
BLAST of Cucsat.G3013.T5 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63530.14.3e-3462.89RING/U-box superfamily protein [more]
AT3G63530.24.3e-3462.89RING/U-box superfamily protein [more]
AT3G19910.13.5e-2050.56RING/U-box superfamily protein [more]
AT5G52140.11.1e-1846.53RING/U-box superfamily protein [more]
AT3G47180.13.4e-1545.98RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 48..88
e-value: 1.7E-4
score: 30.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 47..89
e-value: 2.8E-12
score: 46.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 48..89
score: 11.456568
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 9..93
e-value: 9.2E-19
score: 68.9
NoneNo IPR availablePANTHERPTHR46400:SF5RING/U-BOX SUPERFAMILY PROTEINcoord: 1..96
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 44..93
IPR033276E3 ubiquitin-protein ligase BIG BROTHERPANTHERPTHR46400RING/U-BOX SUPERFAMILY PROTEINcoord: 1..96

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G3013Cucsat.G3013gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3013.T5.E1Cucsat.G3013.T5.E1exon
Cucsat.G3013.T5.E2Cucsat.G3013.T5.E2exon
Cucsat.G3013.T5.E3Cucsat.G3013.T5.E3exon
Cucsat.G3013.T5.E4Cucsat.G3013.T5.E4exon
Cucsat.G3013.T5.E5Cucsat.G3013.T5.E5exon
Cucsat.G3013.T5.E6Cucsat.G3013.T5.E6exon
Cucsat.G3013.T5.E7Cucsat.G3013.T5.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3013.T5.C3Cucsat.G3013.T5.C3CDS
Cucsat.G3013.T5.C2Cucsat.G3013.T5.C2CDS
Cucsat.G3013.T5.C1Cucsat.G3013.T5.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G3013.T5Cucsat.G3013.T5-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046621 negative regulation of organ growth
biological_process GO:0016567 protein ubiquitination
biological_process GO:0048437 floral organ development
biological_process GO:0008285 negative regulation of cell population proliferation
biological_process GO:1900057 positive regulation of leaf senescence
biological_process GO:0051865 protein autoubiquitination
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0031624 ubiquitin conjugating enzyme binding