Cucsat.G19868 (gene) Cucumber (B10) v3

Overview
NameCucsat.G19868
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionvesicle-associated protein 2-2 isoform X1
Locationctg4: 2336683 .. 2341845 (+)
RNA-Seq ExpressionCucsat.G19868
SyntenyCucsat.G19868
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAGAAAAAGCCTCGAAATTGGAGCCAATTTTGTTAAATTATTTGAAAAGAAAAGAGAAAGGGAAGAAAGTTCAAACGGGAATTGGATTCTGCCGCACCGGCTCAAAGCTAAGATCACACCACTGCTGGTACAACTAACACTACCTCTCTCTCTCTCTCTACTTTGCTTTCACTCAGTTTAATCCTCCATTCCACCAACTAGATCATTCATTCTCACCTTCCTCTCTCTAGAATTTTCCAGGGTTTCTCTCTCTCTCTCCCTTCATATGGAATTGTAAATTCCACCAAAATCTTTGGACTCTCTTCCAATTTCTGCATTCCATTCTCTTTTATTTATTCCATTTCAGTTTATCTTTCTCTCTCTATCTCCGTTCCCGCGGAACTGGTGAGTCTTTTGGATTCTTTTTCCGCTTCTTGTTTTATATTCTGCGTGGAAGAATCTTATTGTTTGGTTATTTTTGTTGTTTGAAATTCATGGTATCTTGTTAAGAACGCAGTCTGTGTGTTTTTTCCTGAATTTCTGCTGGTTTCTTGAATATTGGAGTTTCTTTTTTGCCTCTCGATTTGTGTTTGATTTTGTTGAGTTTGGAAATGGGTTGGAGTTTGTAATCGGATTAGTGTTTGGAGTGACTCTGTTCGTTGACTAATGATTTATGGTTCGAGTAGTGTTTGGTTTGTAACTTTGAACGATCTGTTTTGGAATAAGCCCAGCGGTGCGTCTTTGATTTTGATCTTAGTGGGTTTGGTTTGACTTTCTCAACCCAGTTTTTTTTTTTCCTTGGAAAGTTGGGGAAATGGGATATTATTATTATTTTATTTTAGCCAGGAACAGGGTGGATTGGAAACACGTGGTTTTTAGCTTCTATGATCTGTAATTATATGATGAAATACTTGGGATTATTCTATGTTTCTTTTTTTCTTTCTTTTTATTTTTTATTTTTTGAATTTTCTTCTAAATCAAATTTAATTTGTTTTTCCCGATTATAAGAAAATAACGTTTCTGTGTGCAGAGTAATTGTTTCCCAGGCTTTGAATGCAGAAGTATTAATTTTGAATTGTGTATTGTGAGGAAGAGACATGAGTACGAAACTCTTGCATATCCAGCCTAAGGAATTACAATTCTTATGTAAGTGCATTACTAGTAATACTAGTCATTGCTTGCTTTTTGAAAAAGAATTGATGTAAAGTACCTTGCTACTTTCAGTTGAATTGAGGAAACAAAGTACGTGCACAGTTCAACTATCCAATAATACCCATCATCATGTTGCCTTTAAAGTATGAACAACCTTCTTTTCTTTTTGTTCATCTCTTGTTTCTTTGATAATTCATATGATTTTTCATGTCATGTGTGCAATGTTATTATTATGTTTGGCAGGTTAAAACTACGTCTCCTAAGAAATATTGTGTTCGACCAAATGTTGGGATAATTTTGCCAAAATCAACATGTGAATTTTCAGGTACATTCTTTATAATTTTCTTCTAATCTAACATATTTGGCCACCTGGGACATTTGATTCCCGGTCCCCCAGAAACAAAAAAGAGAGTGTTTCTAGATATTTTAACGAAGTTACTACCATGATGATTGACGTTTCAATGAAGTTGATTCTTCCATCTAGTACTTGACATGTACAGTATCTGATCGGCTCAATGTCTTTCTTTAGTTGAATCAAAATTATGAGGACTATCTGGAAAGTTTTAAAAGGGAAATTTGAGAACATATCACTTTAGTGTTTTGAGGAATAAAAACTAAGAATGTCTAATATCATGTCATGATTCAATCCTGCATTTAACAACTATTTCTCCCTTACAGTTTCTTTTAGGAAGACTGTGCAACTGTCTTACTGTAATACTTGCGTCCTTTTTTTTTCTTTGCTTTTGTTCTTGTTTTTCCTAAAAAGAAAACCTAAACCTGGAAGTTGGCTGTGTATTGTTGCTTTTCCTCCTCTTTTTAGAAGCTAATTTCTTCTATGATTCTGACGTAGTTATAATGCAAGCTCAACGGGCTGCCCCACCTGATATGTTATGTAAAGACAAGTTTTTAATTCAAAGCACAATCGTTCCTTCAGGGATAACAGAAGAGGACATCACTGCAAGTATGGTAAGTTTTTTGGATACATTCAGCTTTCATGCCTTGGGTTTTGAACTGTTTACATTTCTTTCCAGTTTTCAAAAGATGGAGGCAAATATATTGAAGAGGATAAGCTCAAAGTGGCGCTCATTAGTCCGCTGAATTCCCCAATACTCTCGCCTTCTGATGGAGCATTGGACGCTAGAATGGATGACGTTATGAAATTGAATGAAGATAGTGGACCATTAAGTGATGGGATGGACACCAATGAAACCCCAAAGCTGAAAGATCAAAATGGTGCATCAGATGAGGTACTTCCCTCCGTGGTTCCAATCCTAAGATATCAAAATGGACTATCAAATGAGGGCATGACCCATGAGGCTTCAAGATTCAAAGATGATTTTGTTGCATTGAAGGGGGAGCGGACCATTGAAGCTTTAAAGCCATCTGATCAAAATGGAGCATTCAGGGAGGAGGTTCTGCCTCATGAGTTTTCAAAACTGAAGGATCCAAATGAAACATCAAAGGAAGAGCTACCTCGTGAAGCATTAAAACCGAGAGATCAAAATCGAGCATTAAAGGAAGAGGAGTTGAGTGTTGAATCACCAACAAAAAAAGTTCAAAATGGTGCACTGAAGTGGGGAGCCTACGGAAGTTCACATCTGGAGAATCCAGTACCAGACACAAAAGTAAGAAAAAACTTTCCTTATCAAATTTGATGATATACTGACTAATTTTTGTTGTTCTAAGAAATTTTTGGAGCCAGAGGTCTCTTTATAGTAACCTCTTCCACATTTCCTAGGGAGGGTGCCTTATCTTTTCCTTGTTTTTCCCAGTAGAAAGTGTTTCTTTTCTAGAGAGGAAAAAAAAAAATTGTAGTAGGAAACTGTAGACCGTGTCATGATTTAGGCATTGTTCAATTTGAGATTTTCAGTTTCCTGTGCATTGGCTTCTAGAACATTGAAGTTTTTCTCTTGTGCATCAGTTTCCTGAGGATGCGGATGAATCCCTAGAGCTAAACAATAGCATGTCAAGATTACAAAAGACTGCTGAGATAAAGCAAGGCACAGAATTGGAACCTTTGAAACTGAAAAAAGCGGAACAGCTACAGTTAGTTAAGGACATTGATGAGATGAAATCGAAGCTACATGAAATTGAATTAAAGCTTGGAGAGGTGATTTTTTATTGCCTTTTGTGCTTTTCTCGTTCTTGTGCTGCCTTTAAGCTATTATTGAAAATCTGATCATTGAGATTGTTGATCCTCACCTAATTCAATTAAGAAATAGGACTGTGATTGATTTTTAATTTTGTTGATGCGCATGCGTATTCAATTTATCTATGAACTTACCATAACAGTTGATTTGTAGAAAGAACCAGCGACCTATGTCAAACAACTTTTAGATAAAAAACTGAAATTTATTCAGAAAAAGAGAGCTTGTTAAATCATCATTTGACCCTAAAGCTTAAACTAGTGGGTTATGGTAAATTTTATTATACAAACACTTAAACACTCTTACCCACTTTTGGGCTTGAAATTTTGTAGATGACCGAATGAATAGAAATTAATATTATGTGGAGAGAAAATGACATTACACCTATAGAAGGGAGGGGAGGAGAGGGGGGGGAGGGGAGGGGGAGGGGAGGGCGACGAGTTCTCCCTAAAAATCTTTGTAGAATATTAAGAAAATCACTCCCAAAAGAATTAGTTCTGAAACCATTAGAAAGAAATCTTCATAAAGAAGCCAAAAAATCAAGCCTTGTCCCGAAAATGATCAAGAATCTTATATGCCGTTTGAAAGTTTGCACTCTGTTTGTTAAAACAATTTCCTGATGAGATTCATTTCACCCTGTTGCAAATTGCACTCCCTGAAATTTGTTAAACTTGGTTCATTTGCTAATTCATTTGGATGTTCAGTAATGCAACTTTTGTGGTTGATTTTGATTTTTCACTGCATCTAGATAAGCTTGGTTTTGTGATACAGGTTGATTCTTAAAATTTGTTTAAACTTGGTCTCAGTTGCCGGTTATCATCTGTTTTTTTTCCTTTTCCCTTCGAGGTTTGCAATGTTTTTCCTTAATTAGATGAAGAATTAGGCGAGGGCTTCCTTTAATCATAATCATCTCAGTACCCAAGAAATGAAATGTTGATGGAAAGGAAAGAAACTACTTCACTAATATTCATTTTTCATTTGCCGTATTATTGTACTTTTTATTGACCAACACAATTGTTAATATGTTTTTTTGCCACATCATTTAATAGGCTCAAGGTACCATTTCAATGCTGTCTGAAGCGAGGAGATTAAGTGCTCAAGAAGTGAAAATCTTGAAGGAGAAATTGGTAACTTCCTGGACCTTATTTTTCTGTTAGTGGATGTTCTTCTTCCATGTTAGAGTCTTATGATGTCCATTTGATATTCAAGCCTTGCCACCCCAAGGGACCCTAATATTAGAGAGATTAGGTACCTTTTTCCCCAGCCGTAAGGATTGGAGATGTATTCAAGGTACTAGGTTGAAACTTCTCGCTTGAAAATTTGAAATCGTTACTGTCTCACTTTGGAGTGGTTGAAGTCCTCTCAGGGTGTACGGGCCTCTCAGTTTTAGTTGGTGGAATGGGATATTATGGCCCACGGGGCTCTAACTATAACAGATTAACTCAGCGCCCCAGCACCACCTCCTTACAATTTAGTTTGAGGTGTACTAATACTAATGCAAAGTAGAAGGAATAGAGTGCCTAAATGTCTGTTGTCCCATCAAGAAAAAATAGTGCAGGGGTAGCTTTAGTGGAGCCATCTCAAAAGTAATATTGTTATTTAGTTCACTTGTTTTGATCTTTTTGGACACTCTGCTCTCAGAAATTCATTCTTAACTGTACTTGTGCTTCCGGATTTTGTATACTATTGGATTTCAGCTGGTTCCTCAATAGCTGCATTCATGGTTTCTCTCACTTCCATTTCTTCTATCATTACTTCTCGTGACTCAGTGTTTTATCTTACTATTTTCTCAGCTGGAACTGAGTAGGAGGGGCAGGGCGAGCAATCAAGTCGGTTTTCCTCCTTTGTTTATCTGTATGGTGGCGTTAATTTGCATTGTGTTCGGATTCGTTTTGCACCATTGAAGTGTAAGGTGGGGAGGAGATGAGATGAGGATTGCAGAAAATATGTAAAGAAAAATATTTTACTTATGTAGATAGATCAGTAGCTAGTGCGGTGTGTTGTCAATAAGATGCACATTTTGATTTTGGGCACTGGAAGTTTGCTGCTCTTAGTATGCAATTCAGATTTTGGGTATAAATCTAACACGATGCTCATCTGCTTTTACCAATGTTTGAAGATGAGTTGTGATGGTTGACCAAATGTTGGGTTTCATATTGGTCTTCTTTTCTCTCTTTTCCCTTTTTCTTTTTGTGATTTGTTTCTGAGTTAGTCTATGTGCTGATTCTAACCGAATTTGAACTTTTTTTTTTTTGTATTGGAAAGTCATACTTGTTCAGTTGTGTTCTAATATGAGCATTTTTGGTCTTC

Coding sequence (CDS)

ATGTCATGTGTGCAATGTTATTATTATGTTTGGCAGGTTAAAACTACGTCTCCTAAGAAATATTGTGTTCGACCAAATGTTGGGATAATTTTGCCAAAATCAACATGTGAATTTTCAGTTATAATGCAAGCTCAACGGGCTGCCCCACCTGATATGTTATGTAAAGACAAGTTTTTAATTCAAAGCACAATCGTTCCTTCAGGGATAACAGAAGAGGACATCACTGCAAGTATGTTTTCAAAAGATGGAGGCAAATATATTGAAGAGGATAAGCTCAAAGTGGCGCTCATTAGTCCGCTGAATTCCCCAATACTCTCGCCTTCTGATGGAGCATTGGACGCTAGAATGGATGACGTTATGAAATTGAATGAAGATAGTGGACCATTAAGTGATGGGATGGACACCAATGAAACCCCAAAGCTGAAAGATCAAAATGGTGCATCAGATGAGGTACTTCCCTCCGTGGTTCCAATCCTAAGATATCAAAATGGACTATCAAATGAGGGCATGACCCATGAGGCTTCAAGATTCAAAGATGATTTTGTTGCATTGAAGGGGGAGCGGACCATTGAAGCTTTAAAGCCATCTGATCAAAATGGAGCATTCAGGGAGGAGGTTCTGCCTCATGAGTTTTCAAAACTGAAGGATCCAAATGAAACATCAAAGGAAGAGCTACCTCGTGAAGCATTAAAACCGAGAGATCAAAATCGAGCATTAAAGGAAGAGGAGTTGAGTGTTGAATCACCAACAAAAAAAGTTCAAAATGGTGCACTGAAGTGGGGAGCCTACGGAAGTTCACATCTGGAGAATCCAGTACCAGACACAAAATTTCCTGAGGATGCGGATGAATCCCTAGAGCTAAACAATAGCATGTCAAGATTACAAAAGACTGCTGAGATAAAGCAAGGCACAGAATTGGAACCTTTGAAACTGAAAAAAGCGGAACAGCTACAGTTAGTTAAGGACATTGATGAGATGAAATCGAAGCTACATGAAATTGAATTAAAGCTTGGAGAGGCTCAAGGTACCATTTCAATGCTGTCTGAAGCGAGGAGATTAAGTGCTCAAGAAGTGAAAATCTTGAAGGAGAAATTGCTGGAACTGAGTAGGAGGGGCAGGGCGAGCAATCAAGTCGGTTTTCCTCCTTTGTTTATCTGTATGGTGGCGTTAATTTGCATTGTGTTCGGATTCGTTTTGCACCATTGA

Protein sequence

MSCVQCYYYVWQVKTTSPKKYCVRPNVGIILPKSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFSKDGGKYIEEDKLKVALISPLNSPILSPSDGALDARMDDVMKLNEDSGPLSDGMDTNETPKLKDQNGASDEVLPSVVPILRYQNGLSNEGMTHEASRFKDDFVALKGERTIEALKPSDQNGAFREEVLPHEFSKLKDPNETSKEELPREALKPRDQNRALKEEELSVESPTKKVQNGALKWGAYGSSHLENPVPDTKFPEDADESLELNNSMSRLQKTAEIKQGTELEPLKLKKAEQLQLVKDIDEMKSKLHEIELKLGEAQGTISMLSEARRLSAQEVKILKEKLLELSRRGRASNQVGFPPLFICMVALICIVFGFVLHH
Homology
[Close]
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-38
Identity = 76/108 (70.37%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           M+  LL IQP+ LQF  +L+KQ++C VQL+N THH+VAFKVKTTSPKKYCVRPNVG++ P
Sbjct: 1   MNMPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           KSTCEF+VIMQA +  PPDM+CKDKFLIQST V +  T+EDITASM S
Sbjct: 61  KSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.1e-31
Identity = 61/107 (57.01%), Postives = 84/107 (78.50%), Query Frame = 0 

Query: 2   STKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILPK 61
           +++LL ++P +LQF FEL+KQ +C++ L+N T ++VAFKVKTT+PKKYCVRPN G++LP+
Sbjct: 19  NSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPR 78

Query: 62  STCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           STCE  V MQAQ+ AP DM CKDKFL+Q  I   G+T +++T  M S
Sbjct: 79  STCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFS 125

[Close]
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS +LL I P +LQF FEL+KQ +C++ L N T ++VAFKVKTT+PKKYCVRPN G++ P
Sbjct: 1   MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           +S+ E  V MQAQ+ AP D+ CKDKFL+Q  +   G T +D+T  M S
Sbjct: 61  RSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27
Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 5   LLHIQPKELQFLFELRKQSTCTVQLSNNTHHH-VAFKVKTTSPKKYCVRPNVGIILPKST 64
           L++I P EL+F FEL+KQS+C++QL+N T    VAFKVKTT+P+KYCVRPN G++LP  +
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 65  CEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM 107
           C  +V MQAQ+ AP DM CKDKFL+Q+ +V  G T +++ A M
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEM 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-27
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 0 

Query: 4  KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILPKST 63
          +L+ IQP EL+FLFEL KQS C ++++N T ++VAFKVKTTSPKKY VRPN G+I P  +
Sbjct: 8  QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 64 CEFSVIMQAQRAAPPDMLCKDKFLIQSTIVP 95
          C   V +QAQR  PPDM CKDKFL+QSTIVP
Sbjct: 68 CIIRVTLQAQREYPPDMQCKDKFLLQSTIVP 98

[Close]
BLAST of Cucsat.G19868 vs. NCBI nr
Match: XP_008455518.1 (PREDICTED: vesicle-associated protein 2-2 isoform X2 [Cucumis melo])

HSP 1 Score: 216 bits (551), Expect = 2.53e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. NCBI nr
Match: XP_004139205.1 (vesicle-associated protein 2-2 isoform X2 [Cucumis sativus] >KAE8651570.1 hypothetical protein Csa_019344 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 2.53e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. NCBI nr
Match: XP_008455504.1 (PREDICTED: vesicle-associated protein 2-2 isoform X1 [Cucumis melo])

HSP 1 Score: 216 bits (551), Expect = 6.29e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. NCBI nr
Match: XP_011648789.1 (vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_011648790.1 vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_031737157.1 vesicle-associated protein 2-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 6.29e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. NCBI nr
Match: KAA0063645.1 (vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa] >TYK18380.1 vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 215 bits (547), Expect = 2.57e-65
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS+KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSSKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match: A0A1S3C0N6 (vesicle-associated protein 2-2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495652 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 1.22e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match: A0A0A0LIH5 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013300 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.05e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match: A0A1S3C2B8 (vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495652 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.05e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match: A0A5D3D4C3 (Vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001030 PE=4 SV=1)

HSP 1 Score: 215 bits (547), Expect = 1.24e-65
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS+KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSSKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match: A0A6J1CPY8 (vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC111013073 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 8.92e-63
Identity = 101/108 (93.52%), Postives = 106/108 (98.15%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLL+IQPKELQF+FEL+KQSTCTVQL+NNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLNIQPKELQFIFELKKQSTCTVQLANNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTC+FSVIMQAQRAAPPDMLCKDKFLIQSTIVPSG TEEDITASM S
Sbjct: 61  KSTCDFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGTTEEDITASMFS 108

The following BLAST results are available for this feature:
BLAST of Cucsat.G19868 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9DHD71.8e-3870.37Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=... [more]
Q8VZ956.1e-3157.01Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=... [more]
Q9SHC82.2e-2855.56Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=... [more]
Q84WW51.4e-2756.31Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=... [more]
Q9LVU13.1e-2764.84Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=... [more]
BLAST of Cucsat.G19868 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455518.12.53e-6699.07PREDICTED: vesicle-associated protein 2-2 isoform X2 [Cucumis melo][more]
XP_004139205.12.53e-6699.07vesicle-associated protein 2-2 isoform X2 [Cucumis sativus] >KAE8651570.1 hypoth... [more]
XP_008455504.16.29e-6699.07PREDICTED: vesicle-associated protein 2-2 isoform X1 [Cucumis melo][more]
XP_011648789.16.29e-6699.07vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_011648790.1 vesi... [more]
KAA0063645.12.57e-6598.15vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa] >TYK18380.1... [more]
BLAST of Cucsat.G19868 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C0N61.22e-6699.07vesicle-associated protein 2-2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349565... [more]
A0A0A0LIH53.05e-6699.07MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013300 PE=4 SV... [more]
A0A1S3C2B83.05e-6699.07vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349565... [more]
A0A5D3D4C31.24e-6598.15Vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1CPY88.92e-6393.52vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC1110130... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 6..111
e-value: 3.3E-31
score: 107.4
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 5..125
score: 29.181423
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 1..128
e-value: 3.1E-42
score: 145.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..279
NoneNo IPR availablePANTHERPTHR10809:SF45VESICLE-ASSOCIATED PROTEIN 2-2coord: 1..367
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 1..367
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 4..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G19868.T18Cucsat.G19868.T18mRNA
Cucsat.G19868.T17Cucsat.G19868.T17mRNA
Cucsat.G19868.T11Cucsat.G19868.T11mRNA
Cucsat.G19868.T13Cucsat.G19868.T13mRNA
Cucsat.G19868.T8Cucsat.G19868.T8mRNA
Cucsat.G19868.T9Cucsat.G19868.T9mRNA
Cucsat.G19868.T2Cucsat.G19868.T2mRNA
Cucsat.G19868.T1Cucsat.G19868.T1mRNA
Cucsat.G19868.T6Cucsat.G19868.T6mRNA
Cucsat.G19868.T7Cucsat.G19868.T7mRNA
Cucsat.G19868.T5Cucsat.G19868.T5mRNA
Cucsat.G19868.T23Cucsat.G19868.T23mRNA
Cucsat.G19868.T25Cucsat.G19868.T25mRNA
Cucsat.G19868.T24Cucsat.G19868.T24mRNA
Cucsat.G19868.T27Cucsat.G19868.T27mRNA
Cucsat.G19868.T12Cucsat.G19868.T12mRNA
Cucsat.G19868.T4Cucsat.G19868.T4mRNA
Cucsat.G19868.T28Cucsat.G19868.T28mRNA
Cucsat.G19868.T20Cucsat.G19868.T20mRNA
Cucsat.G19868.T33Cucsat.G19868.T33mRNA
Cucsat.G19868.T19Cucsat.G19868.T19mRNA
Cucsat.G19868.T26Cucsat.G19868.T26mRNA
Cucsat.G19868.T14Cucsat.G19868.T14mRNA
Cucsat.G19868.T29Cucsat.G19868.T29mRNA
Cucsat.G19868.T32Cucsat.G19868.T32mRNA
Cucsat.G19868.T15Cucsat.G19868.T15mRNA
Cucsat.G19868.T10Cucsat.G19868.T10mRNA
Cucsat.G19868.T3Cucsat.G19868.T3mRNA
Cucsat.G19868.T30Cucsat.G19868.T30mRNA
Cucsat.G19868.T16Cucsat.G19868.T16mRNA
Cucsat.G19868.T22Cucsat.G19868.T22mRNA
Cucsat.G19868.T31Cucsat.G19868.T31mRNA
Cucsat.G19868.T21Cucsat.G19868.T21mRNA
Cucsat.G19868.T34Cucsat.G19868.T34mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090158 endoplasmic reticulum membrane organization
biological_process GO:0061817 endoplasmic reticulum-plasma membrane tethering
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane