Cucsat.G19868.T33 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G19868.T33
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionvesicle-associated protein 2-2 isoform X1
Locationctg4: 2336304 .. 2341845 (+)
RNA-Seq ExpressionCucsat.G19868.T33
SyntenyCucsat.G19868.T33
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAGAGAAAGGGAAGAAAGTTCAAACGGGAATTGGATTCTGCCGCACCGGCTCAAAGCTAAGATCACACCACTGCTGGTACAACTAACACTACCTCTCTCTCTCTCTCTACTTTGCTTTCACTCAGTTTAATCCTCCATTCCACCAACTAGATCATTCATTCTCACCTTCCTCTCTCTAGAATTTTCCAGGGTTTCTCTCTCTCTCTCCCTTCATATGGAATTGTAAATTCCACCAAAATCTTTGGACTCTCTTCCAATTTCTGCATTCCATTCTCTTTTATTTATTCCATTTCAGTTTATCTTTCTCTCTCTATCTCCGTTCCCGCGGAACTGGTGAGTCTTTTGGATTCTTTTTCCGCTTCTTGTTTTATATTCTGCGTGGAAGAATCTTATTGTTTGGTTATTTTTGTTGTTTGAAATTCATGGTATCTTGTTAAGAACGCAGTCTGTGTGTTTTTTCCTGAATTTCTGCTGGTTTCTTGAATATTGGAGTTTCTTTTTTGCCTCTCGATTTGTGTTTGATTTTGTTGAGTTTGGAAATGGGTTGGAGTTTGTAATCGGATTAGTGTTTGGAGTGACTCTGTTCGTTGACTAATGATTTATGGTTCGAGTAGTGTTTGGTTTGTAACTTTGAACGATCTGTTTTGGAATAAGCCCAGCGGTGCGTCTTTGATTTTGATCTTAGTGGGTTTGGTTTGACTTTCTCAACCCAGTTTTTTTTTTTCCTTGGAAAGTTGGGGAAATGGGATATTATTATTATTTTATTTTAGCCAGGAACAGGGTGGATTGGAAACACGTGGTTTTTAGCTTCTATGATCTGTAATTATATGATGAAATACTTGGGATTATTCTATGTTTCTTTTTTTCTTTCTTTTTATTTTTTATTTTTTGAATTTTCTTCTAAATCAAATTTAATTTGTTTTTCCCGATTATAAGAAAATAACGTTTCTGTGTGCAGAGTAATTGTTTCCCAGGCTTTGAATGCAGAAGTATTAATTTTGAATTGTGTATTGTGAGGAAGAGACATGAGTACGAAACTCTTGCATATCCAGCCTAAGGAATTACAATTCTTATGTAAGTGCATTACTAGTAATACTAGTCATTGCTTGCTTTTTGAAAAAGAATTGATGTAAAGTACCTTGCTACTTTCAGTTGAATTGAGGAAACAAAGTACGTGCACAGTTCAACTATCCAATAATACCCATCATCATGTTGCCTTTAAAGTATGAACAACCTTCTTTTCTTTTTGTTCATCTCTTGTTTCTTTGATAATTCATATGATTTTTCATGTCATGTGTGCAATGTTATTATTATGTTTGGCAGGTTAAAACTACGTCTCCTAAGAAATATTGTGTTCGACCAAATGTTGGGATAATTTTGCCAAAATCAACATGTGAATTTTCAGGTACATTCTTTATAATTTTCTTCTAATCTAACATATTTGGCCACCTGGGACATTTGATTCCCGGTCCCCCAGAAACAAAAAAGAGAGTGTTTCTAGATATTTTAACGAAGTTACTACCATGATGATTGACGTTTCAATGAAGTTGATTCTTCCATCTAGTACTTGACATGTACAGTATCTGATCGGCTCAATGTCTTTCTTTAGTTGAATCAAAATTATGAGGACTATCTGGAAAGTTTTAAAAGGGAAATTTGAGAACATATCACTTTAGTGTTTTGAGGAATAAAAACTAAGAATGTCTAATATCATGTCATGATTCAATCCTGCATTTAACAACTATTTCTCCCTTACAGTTTCTTTTAGGAAGACTGTGCAACTGTCTTACTGTAATACTTGCGTCCTTTTTTTTTCTTTGCTTTTGTTCTTGTTTTTCCTAAAAAGAAAACCTAAACCTGGAAGTTGGCTGTGTATTGTTGCTTTTCCTCCTCTTTTTAGAAGCTAATTTCTTCTATGATTCTGACGTAGTTATAATGCAAGCTCAACGGGCTGCCCCACCTGATATGTTATGTAAAGACAAGTTTTTAATTCAAAGCACAATCGTTCCTTCAGGGATAACAGAAGAGGACATCACTGCAAGTATGGTAAGTTTTTTGGATACATTCAGCTTTCATGCCTTGGGTTTTGAACTGTTTACATTTCTTTCCAGTTTTCAAAAGATGGAGGCAAATATATTGAAGAGGATAAGCTCAAAGTGGCGCTCATTAGTCCGCTGAATTCCCCAATACTCTCGCCTTCTGATGGAGCATTGGACGCTAGAATGGATGACGTTATGAAATTGAATGAAGATAGTGGACCATTAAGTGATGGGATGGACACCAATGAAACCCCAAAGCTGAAAGATCAAAATGGTGCATCAGATGAGGTACTTCCCTCCGTGGTTCCAATCCTAAGATATCAAAATGGACTATCAAATGAGGGCATGACCCATGAGGCTTCAAGATTCAAAGATGATTTTGTTGCATTGAAGGGGGAGCGGACCATTGAAGCTTTAAAGCCATCTGATCAAAATGGAGCATTCAGGGAGGAGGTTCTGCCTCATGAGTTTTCAAAACTGAAGGATCCAAATGAAACATCAAAGGAAGAGCTACCTCGTGAAGCATTAAAACCGAGAGATCAAAATCGAGCATTAAAGGAAGAGGAGTTGAGTGTTGAATCACCAACAAAAAAAGTTCAAAATGGTGCACTGAAGTGGGGAGCCTACGGAAGTTCACATCTGGAGAATCCAGTACCAGACACAAAAGTAAGAAAAAACTTTCCTTATCAAATTTGATGATATACTGACTAATTTTTGTTGTTCTAAGAAATTTTTGGAGCCAGAGGTCTCTTTATAGTAACCTCTTCCACATTTCCTAGGGAGGGTGCCTTATCTTTTCCTTGTTTTTCCCAGTAGAAAGTGTTTCTTTTCTAGAGAGGAAAAAAAAAAATTGTAGTAGGAAACTGTAGACCGTGTCATGATTTAGGCATTGTTCAATTTGAGATTTTCAGTTTCCTGTGCATTGGCTTCTAGAACATTGAAGTTTTTCTCTTGTGCATCAGTTTCCTGAGGATGCGGATGAATCCCTAGAGCTAAACAATAGCATGTCAAGATTACAAAAGACTGCTGAGATAAAGCAAGGCACAGAATTGGAACCTTTGAAACTGAAAAAAGCGGAACAGCTACAGTTAGTTAAGGACATTGATGAGATGAAATCGAAGCTACATGAAATTGAATTAAAGCTTGGAGAGGTGATTTTTTATTGCCTTTTGTGCTTTTCTCGTTCTTGTGCTGCCTTTAAGCTATTATTGAAAATCTGATCATTGAGATTGTTGATCCTCACCTAATTCAATTAAGAAATAGGACTGTGATTGATTTTTAATTTTGTTGATGCGCATGCGTATTCAATTTATCTATGAACTTACCATAACAGTTGATTTGTAGAAAGAACCAGCGACCTATGTCAAACAACTTTTAGATAAAAAACTGAAATTTATTCAGAAAAAGAGAGCTTGTTAAATCATCATTTGACCCTAAAGCTTAAACTAGTGGGTTATGGTAAATTTTATTATACAAACACTTAAACACTCTTACCCACTTTTGGGCTTGAAATTTTGTAGATGACCGAATGAATAGAAATTAATATTATGTGGAGAGAAAATGACATTACACCTATAGAAGGGAGGGGAGGAGAGGGGGGGGAGGGGAGGGGGAGGGGAGGGCGACGAGTTCTCCCTAAAAATCTTTGTAGAATATTAAGAAAATCACTCCCAAAAGAATTAGTTCTGAAACCATTAGAAAGAAATCTTCATAAAGAAGCCAAAAAATCAAGCCTTGTCCCGAAAATGATCAAGAATCTTATATGCCGTTTGAAAGTTTGCACTCTGTTTGTTAAAACAATTTCCTGATGAGATTCATTTCACCCTGTTGCAAATTGCACTCCCTGAAATTTGTTAAACTTGGTTCATTTGCTAATTCATTTGGATGTTCAGTAATGCAACTTTTGTGGTTGATTTTGATTTTTCACTGCATCTAGATAAGCTTGGTTTTGTGATACAGGTTGATTCTTAAAATTTGTTTAAACTTGGTCTCAGTTGCCGGTTATCATCTGTTTTTTTTCCTTTTCCCTTCGAGGTTTGCAATGTTTTTCCTTAATTAGATGAAGAATTAGGCGAGGGCTTCCTTTAATCATAATCATCTCAGTACCCAAGAAATGAAATGTTGATGGAAAGGAAAGAAACTACTTCACTAATATTCATTTTTCATTTGCCGTATTATTGTACTTTTTATTGACCAACACAATTGTTAATATGTTTTTTTGCCACATCATTTAATAGGCTCAAGGTACCATTTCAATGCTGTCTGAAGCGAGGAGATTAAGTGCTCAAGAAGTGAAAATCTTGAAGGAGAAATTGGTAACTTCCTGGACCTTATTTTTCTGTTAGTGGATGTTCTTCTTCCATGTTAGAGTCTTATGATGTCCATTTGATATTCAAGCCTTGCCACCCCAAGGGACCCTAATATTAGAGAGATTAGGTACCTTTTTCCCCAGCCGTAAGGATTGGAGATGTATTCAAGGTACTAGGTTGAAACTTCTCGCTTGAAAATTTGAAATCGTTACTGTCTCACTTTGGAGTGGTTGAAGTCCTCTCAGGGTGTACGGGCCTCTCAGTTTTAGTTGGTGGAATGGGATATTATGGCCCACGGGGCTCTAACTATAACAGATTAACTCAGCGCCCCAGCACCACCTCCTTACAATTTAGTTTGAGGTGTACTAATACTAATGCAAAGTAGAAGGAATAGAGTGCCTAAATGTCTGTTGTCCCATCAAGAAAAAATAGTGCAGGGGTAGCTTTAGTGGAGCCATCTCAAAAGTAATATTGTTATTTAGTTCACTTGTTTTGATCTTTTTGGACACTCTGCTCTCAGAAATTCATTCTTAACTGTACTTGTGCTTCCGGATTTTGTATACTATTGGATTTCAGCTGGTTCCTCAATAGCTGCATTCATGGTTTCTCTCACTTCCATTTCTTCTATCATTACTTCTCGTGACTCAGTGTTTTATCTTACTATTTTCTCAGCTGGAACTGAGTAGGAGGGGCAGGGCGAGCAATCAAGTCGGTTTTCCTCCTTTGTTTATCTGTATGGTGGCGTTAATTTGCATTGTGTTCGGATTCGTTTTGCACCATTGAAGTGTAAGGTGGGGAGGAGATGAGATGAGGATTGCAGAAAATATGTAAAGAAAAATATTTTACTTATGTAGATAGATCAGTAGCTAGTGCGGTGTGTTGTCAATAAGATGCACATTTTGATTTTGGGCACTGGAAGTTTGCTGCTCTTAGTATGCAATTCAGATTTTGGGTATAAATCTAACACGATGCTCATCTGCTTTTACCAATGTTTGAAGATGAGTTGTGATGGTTGACCAAATGTTGGGTTTCATATTGGTCTTCTTTTCTCTCTTTTCCCTTTTTCTTTTTGTGATTTGTTTCTGAGTTAGTCTATGTGCTGATTCTAACCGAATTTGAACTTTTTTTTTTTTGTATTGGAAAGTCATACTTGTTCAGTTGTGTTCTAATATGAGCATTTTTGGTCTTC

Coding sequence (CDS)

ATGAGTACGAAACTCTTGCATATCCAGCCTAAGGAATTACAATTCTTATTTGAATTGAGGAAACAAAGTACGTGCACAGTTCAACTATCCAATAATACCCATCATCATGTTGCCTTTAAAGTTAAAACTACGTCTCCTAAGAAATATTGTGTTCGACCAAATGTTGGGATAATTTTGCCAAAATCAACATGTGAATTTTCAGTTATAATGCAAGCTCAACGGGCTGCCCCACCTGATATGTTATGTAAAGACAAGTTTTTAATTCAAAGCACAATCGTTCCTTCAGGGATAACAGAAGAGGACATCACTGCAAGTATGGTAAGTTTTTTGGATACATTCAGCTTTCATGCCTTGGGTTTTGAACTGTTTACATTTCTTTCCAGTTTTCAAAAGATGGAGGCAAATATATTGAAGAGGATAAGCTCAAAGTGGCGCTCATTAGTCCGCTGA

Protein sequence

MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILPKSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVSFLDTFSFHALGFELFTFLSSFQKMEANILKRISSKWRSLVR
Homology
[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-38
Identity = 76/108 (70.37%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           M+  LL IQP+ LQF  +L+KQ++C VQL+N THH+VAFKVKTTSPKKYCVRPNVG++ P
Sbjct: 1   MNMPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           KSTCEF+VIMQA +  PPDM+CKDKFLIQST V +  T+EDITASM S
Sbjct: 61  KSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.1e-31
Identity = 61/107 (57.01%), Postives = 84/107 (78.50%), Query Frame = 0 

Query: 2   STKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILPK 61
           +++LL ++P +LQF FEL+KQ +C++ L+N T ++VAFKVKTT+PKKYCVRPN G++LP+
Sbjct: 19  NSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPR 78

Query: 62  STCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           STCE  V MQAQ+ AP DM CKDKFL+Q  I   G+T +++T  M S
Sbjct: 79  STCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFS 125

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS +LL I P +LQF FEL+KQ +C++ L N T ++VAFKVKTT+PKKYCVRPN G++ P
Sbjct: 1   MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 109
           +S+ E  V MQAQ+ AP D+ CKDKFL+Q  +   G T +D+T  M S
Sbjct: 61  RSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27
Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 5   LLHIQPKELQFLFELRKQSTCTVQLSNNTHHH-VAFKVKTTSPKKYCVRPNVGIILPKST 64
           L++I P EL+F FEL+KQS+C++QL+N T    VAFKVKTT+P+KYCVRPN G++LP  +
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 65  CEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM 107
           C  +V MQAQ+ AP DM CKDKFL+Q+ +V  G T +++ A M
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEM 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-27
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 0 

Query: 4  KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILPKST 63
          +L+ IQP EL+FLFEL KQS C ++++N T ++VAFKVKTTSPKKY VRPN G+I P  +
Sbjct: 8  QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 64 CEFSVIMQAQRAAPPDMLCKDKFLIQSTIVP 95
          C   V +QAQR  PPDM CKDKFL+QSTIVP
Sbjct: 68 CIIRVTLQAQREYPPDMQCKDKFLLQSTIVP 98

[Close]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match: XP_008455518.1 (PREDICTED: vesicle-associated protein 2-2 isoform X2 [Cucumis melo])

HSP 1 Score: 216 bits (551), Expect = 2.53e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match: XP_004139205.1 (vesicle-associated protein 2-2 isoform X2 [Cucumis sativus] >KAE8651570.1 hypothetical protein Csa_019344 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 2.53e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match: XP_008455504.1 (PREDICTED: vesicle-associated protein 2-2 isoform X1 [Cucumis melo])

HSP 1 Score: 216 bits (551), Expect = 6.29e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match: XP_011648789.1 (vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_011648790.1 vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_031737157.1 vesicle-associated protein 2-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 6.29e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match: KAA0063645.1 (vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa] >TYK18380.1 vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 215 bits (547), Expect = 2.57e-65
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS+KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSSKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match: A0A1S3C0N6 (vesicle-associated protein 2-2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495652 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 1.22e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match: A0A0A0LIH5 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013300 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.05e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match: A0A1S3C2B8 (vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495652 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.05e-66
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match: A0A5D3D4C3 (Vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001030 PE=4 SV=1)

HSP 1 Score: 215 bits (547), Expect = 1.24e-65
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MS+KLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSSKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASM S
Sbjct: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFS 108

[Close]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match: A0A6J1CPY8 (vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC111013073 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 8.92e-63
Identity = 101/108 (93.52%), Postives = 106/108 (98.15%), Query Frame = 0 

Query: 1   MSTKLLHIQPKELQFLFELRKQSTCTVQLSNNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60
           MSTKLL+IQPKELQF+FEL+KQSTCTVQL+NNTHHHVAFKVKTTSPKKYCVRPNVGIILP
Sbjct: 1   MSTKLLNIQPKELQFIFELKKQSTCTVQLANNTHHHVAFKVKTTSPKKYCVRPNVGIILP 60

Query: 61  KSTCEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMVS 108
           KSTC+FSVIMQAQRAAPPDMLCKDKFLIQSTIVPSG TEEDITASM S
Sbjct: 61  KSTCDFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGTTEEDITASMFS 108

The following BLAST results are available for this feature:
BLAST of Cucsat.G19868.T33 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9DHD71.8e-3870.37Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=... [more]
Q8VZ956.1e-3157.01Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=... [more]
Q9SHC82.2e-2855.56Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=... [more]
Q84WW51.4e-2756.31Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=... [more]
Q9LVU13.1e-2764.84Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=... [more]
BLAST of Cucsat.G19868.T33 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455518.12.53e-6699.07PREDICTED: vesicle-associated protein 2-2 isoform X2 [Cucumis melo][more]
XP_004139205.12.53e-6699.07vesicle-associated protein 2-2 isoform X2 [Cucumis sativus] >KAE8651570.1 hypoth... [more]
XP_008455504.16.29e-6699.07PREDICTED: vesicle-associated protein 2-2 isoform X1 [Cucumis melo][more]
XP_011648789.16.29e-6699.07vesicle-associated protein 2-2 isoform X1 [Cucumis sativus] >XP_011648790.1 vesi... [more]
KAA0063645.12.57e-6598.15vesicle-associated protein 2-2 isoform X1 [Cucumis melo var. makuwa] >TYK18380.1... [more]
BLAST of Cucsat.G19868.T33 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C0N61.22e-6699.07vesicle-associated protein 2-2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349565... [more]
A0A0A0LIH53.05e-6699.07MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013300 PE=4 SV... [more]
A0A1S3C2B83.05e-6699.07vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349565... [more]
A0A5D3D4C31.24e-6598.15Vesicle-associated protein 2-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1CPY88.92e-6393.52vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC1110130... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 1..117
e-value: 3.9E-39
score: 135.4
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 6..106
e-value: 2.1E-31
score: 108.0
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 5..149
score: 25.859221
NoneNo IPR availablePANTHERPTHR10809:SF45VESICLE-ASSOCIATED PROTEIN 2-2coord: 1..113
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 1..113
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 4..104

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G19868Cucsat.G19868gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19868.T33.E1Cucsat.G19868.T33.E1exon
Cucsat.G19868.T33.E2Cucsat.G19868.T33.E2exon
Cucsat.G19868.T33.E3Cucsat.G19868.T33.E3exon
Cucsat.G19868.T33.E4Cucsat.G19868.T33.E4exon
Cucsat.G19868.T33.E5Cucsat.G19868.T33.E5exon
Cucsat.G19868.T33.E6Cucsat.G19868.T33.E6exon
Cucsat.G19868.T33.E7Cucsat.G19868.T33.E7exon
Cucsat.G19868.T33.E8Cucsat.G19868.T33.E8exon
Cucsat.G19868.T33.E9Cucsat.G19868.T33.E9exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19868.T33.C1Cucsat.G19868.T33.C1CDS
Cucsat.G19868.T33.C2Cucsat.G19868.T33.C2CDS
Cucsat.G19868.T33.C3Cucsat.G19868.T33.C3CDS
Cucsat.G19868.T33.C4Cucsat.G19868.T33.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G19868.T33Cucsat.G19868.T33-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0061817 endoplasmic reticulum-plasma membrane tethering
biological_process GO:0090158 endoplasmic reticulum membrane organization
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane