Cucsat.G15539 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15539
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat
Locationctg2009: 696568 .. 699038 (+)
RNA-Seq ExpressionCucsat.G15539
SyntenyCucsat.G15539
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGGGAGGAATGGTTGGAGTAATGAAACCATGCAGGTATAAAATGCAAATCAAAACTTTACGGTTTCATTCACTATCACTACTCACCGATGAAATTATTTTCCAATCACAGCTCTCATGGAATCACATCCATGCCCAACAATTCTTCCTTCAAACACTCCATTTCCCTCTCCAAACCTTCCTTCCTCTATTCCACATGGCATTCTCCACCACCGCCGGCGGTTTTGGCTGACCCTGTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTTCTCCCTTCCTTCAAACCCCACCATTTCATCGACCTCATCAACCAAAACCCTTTCTCTCTTTCCCCCTCCTCTCTCTTCTCCTTCTTCAATTGGCTCTCTTCTATCCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCTAATTTCCTCTCTGCCCATCAAATGTTCCAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACACTGCAGGTACGCGTTGTTCGAATTTTGTTTTTGATGCTTTGATGATTGCATATTGGGATTCCGGATTCGTCTCCGATGCTATTCAGTGTTTTAGGTTGGTTAGGAATAGTAATTTTCAAATCCCGTTTCATGGTTGCGGGTACTTGCTTGATAAAATGATAAATTCGAACTCCCCTGTTACAATTTGGACGTTTTATTCGGAAATTTTGGAATATGGGTTCCCGCCCAAAGTGCAGTATTACAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTATTAGAGATGCCAAGTTGATTTTTAATGAAATTAGGAAGAGGGGTTTGCGTCCTACAACTGTTAGTTTCAATACCTTGATTAATGGGCTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGACCATGGAAGAGAATAGAATATATCCTGATGTTTTCACTTACAGCGTTCTGATTCATGGATTATGCAAGGAAGGTAGGTTAGATGTTGCAGAACAACTGTTTGATGAAATGCAGCAGAGAGGATTGAGACCAAACGGCATTACGTTCACCGCATTGATTGACGGGCAATATAGGAGCAGACGAATGGACTCAGCTATGAACACTTATCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCTGATAAAATCACTTACACCACACTCATAGACGGTTATTGCAAAGAGGGAGATCTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGAGATGCAGAGAGGACCTTGAGGGAGATGGTGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATCGATGGGTATTGCAAGAAAGGCAATGTTAAGATGGGGTTTAAGCTGCTGAAAGAGATGCAAATCAATGGCCATAAACCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAGTAGATTATGCGTATTATACTTCTTTAGTCAGTGAATACAATAAATCCTTAAAGGATCGTCAAAAGAGGTGATGAAAGATTTGTTGTTGAGTGTTAACTTTTTCAGTTTGCAAGAGAATCCACATTGTAGATAAAGGGTTGTCTATGCATATAGGAGCTTGGAACTTCTTAAAAATTAAAAAAGAAGTGAAGGAGAAGGACAATGTGTTCAAATTTCATGGCGGCAATCTAGATGAGGTATCAACTCTTACAACCTTCTTGATAATCAAATTATGGAATGGTGGGTAGAGTTAGACATTTATCTCTCTAGATTAGTTAAGGTACACATGCTCTGAAACGAGAGAGAAAATGCTTTGCGTAACTCTTCTTTTTATACCGTTTGGATAATCGTCCATGGACGAGCTTGATTATAGGGAGTTGTTTGAAAATTTCTATTCTTATTTGAAAATTGTTTTTTCATCTGTGTATTGTAAAGCCCTCCCCAGGTAGGCACTAGATGCATGTCCACGCCTAAGGCTCATTCGAACAATTTTCATTATTTTTAAAAATATAATAATTTTAGTTTTTTCTTTCTTTATTAAT

Coding sequence (CDS)

ATGAAATTATTTTCCAATCACAGCTCTCATGGAATCACATCCATGCCCAACAATTCTTCCTTCAAACACTCCATTTCCCTCTCCAAACCTTCCTTCCTCTATTCCACATGGCATTCTCCACCACCGCCGGCGGTTTTGGCTGACCCTGTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTTCTCCCTTCCTTCAAACCCCACCATTTCATCGACCTCATCAACCAAAACCCTTTCTCTCTTTCCCCCTCCTCTCTCTTCTCCTTCTTCAATTGGCTCTCTTCTATCCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCTAATTTCCTCTCTGCCCATCAAATGTTCCAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACACTGCAGGTAGGTTAGATGTTGCAGAACAACTGTTTGATGAAATGCAGCAGAGAGGATTGAGACCAAACGGCATTACGTTCACCGCATTGATTGACGGGCAATATAGGAGCAGACGAATGGACTCAGCTATGAACACTTATCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCTGATAAAATCACTTACACCACACTCATAGACGGTTATTGCAAAGAGGGAGATCTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGAGATGCAGAGAGGACCTTGAGGGAGATGGTGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATCGATGGGTATTGCAAGAAAGGCAATGTTAAGATGGGGTTTAAGCTGCTGAAAGAGATGCAAATCAATGGCCATAAACCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAGTAGATTATGCGTATTATACTTCTTTAGTCAGTGAATACAATAAATCCTTAAAGGATCGTCAAAAGAGGTGA

Protein sequence

MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR
Homology
BLAST of Cucsat.G15539 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.4e-89
Identity = 154/272 (56.62%), Postives = 207/272 (76.10%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M +RGL PN + FT LI G  R+  +D    +Y +ML+ G++PD+V+YNTL+NG CK GD
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           +  AR +VD M   G++PDKITYTTLIDG+C+ GD+E+A+EIRK M++ G+ LD V F+A
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           L+ G C++GRV DAER LREM+ AG+KPDD TYTM++D +CKKG+ + GFKLLKEMQ +G
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H P V+TYNVL+NGLCK GQMKNA+MLL+AMLN+GV PDDITYN LLEGH ++  +    
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 273
             + E G++ D A Y S+V+E +++ KD + R
Sbjct: 576 IQKPEIGIVADLASYKSIVNELDRASKDHRNR 607

BLAST of Cucsat.G15539 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-49
Identity = 97/268 (36.19%), Postives = 158/268 (58.96%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M+ +G  P+ I+++ +++G  R   +D        M   G+KP+  +Y +++  LC++  
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           + +A +   EM   G+ PD + YTTLIDG+CK GD+ +A +    M+   +  D + +TA
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           +ISGFC+ G + +A +   EM   G++PD  T+T +I+GYCK G++K  F++   M   G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
             P V+TY  L++GLCK+G + +AN LL  M  +G+ P+  TYN ++ G CK+G  E+ +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 241 KLRNE---KGLIVDYAYYTSLVSEYNKS 266
           KL  E    GL  D   YT+L+  Y KS
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKS 539

BLAST of Cucsat.G15539 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.4e-49
Identity = 92/273 (33.70%), Postives = 161/273 (58.97%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M+ +G  PN +T+  LIDG  + R++D        M   G++P+L+ YN ++NGLC+ G 
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           + +   ++ EM   G   D++TY TLI GYCKEG+   A+ +   M   G+    + +T+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LI   C+ G +  A   L +M   G+ P++ TYT ++DG+ +KG +   +++L+EM  NG
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
             P V+TYN L+NG C  G+M++A  +LE M   G++PD ++Y+ +L G C++   ++ L
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 KLRN---EKGLIVDYAYYTSLVSEYNKSLKDRQ 271
           +++    EKG+  D   Y+SL+  + +  + ++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503

BLAST of Cucsat.G15539 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.5e-47
Identity = 97/273 (35.53%), Postives = 156/273 (57.14%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQ+ G+ PN  T+  +++   +  R   A   + +M   GV  ++V YNTL+ GLC+   
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           +N+A K+VD+MK  G+ P+ ITY TLIDG+C  G L  A+ + + +   G+    V +  
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           L+SGFCR G    A + ++EM E G+KP   TYT++ID + +  N++   +L   M+  G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAE 240
             P V TY+VL++G C +GQM  A+ L ++M+     P+++ YN ++ G+CK G   +A 
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 241 DLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 271
            LLK   EK L  + A Y  ++    K  K ++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

BLAST of Cucsat.G15539 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-45
Identity = 90/271 (33.21%), Postives = 156/271 (57.56%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M +  + PN  TF  LIDG ++   +  +M  + +ML   VKP+++ YN+L+NGLC  G 
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           +++A  + D+M   G++P+ ITY  LI+G+CK   L+ A+++   +  +G V     +  
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LI  +C+ G++ D      EM   G+ PD  TY  +I G C+ GN++   KL  ++   G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
             P ++T+++LM G C++G+ + A MLL+ M  +G+ P  +TYNI+++G+CK G  +   
Sbjct: 467 -LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 526

Query: 241 KLR----NEKGLIVDYAYYTSLVSEYNKSLK 268
            +R     E+ L ++ A Y  L+  Y++  K
Sbjct: 527 NMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556

BLAST of Cucsat.G15539 vs. NCBI nr
Match: XP_031737521.1 (putative pentatricopeptide repeat-containing protein At1g09680 isoform X2 [Cucumis sativus] >KAE8650482.1 hypothetical protein Csa_009738 [Cucumis sativus])

HSP 1 Score: 543 bits (1398), Expect = 6.84e-192
Identity = 269/272 (98.90%), Postives = 271/272 (99.63%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQQRGLRPNGITFTALIDGQ RSRR+DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD
Sbjct: 174 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 233

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VNKARKLVDEM+MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA
Sbjct: 234 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 293

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING
Sbjct: 294 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 353

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL
Sbjct: 354 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 413

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR
Sbjct: 414 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 445

BLAST of Cucsat.G15539 vs. NCBI nr
Match: XP_004140820.2 (putative pentatricopeptide repeat-containing protein At1g09680 isoform X1 [Cucumis sativus])

HSP 1 Score: 543 bits (1398), Expect = 1.63e-189
Identity = 269/272 (98.90%), Postives = 271/272 (99.63%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQQRGLRPNGITFTALIDGQ RSRR+DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD
Sbjct: 333 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 392

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VNKARKLVDEM+MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA
Sbjct: 393 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 452

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING
Sbjct: 453 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 512

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL
Sbjct: 513 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 572

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR
Sbjct: 573 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 604

BLAST of Cucsat.G15539 vs. NCBI nr
Match: XP_008457121.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucumis melo] >KAA0047378.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK14055.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 518 bits (1334), Expect = 5.28e-180
Identity = 252/272 (92.65%), Postives = 267/272 (98.16%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVKPDLVMYNTLL GLCKVGD
Sbjct: 319 MQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGD 378

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EIRKGMNEEGVVLDNVAFTA
Sbjct: 379 VNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEIRKGMNEEGVVLDNVAFTA 438

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCKKG+VK GFK+LKEMQING
Sbjct: 439 LISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCKKGDVKTGFKMLKEMQING 498

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           HKPGVITYNVLMNGLCKQGQMKNA+MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNAHMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGLI+DYAYYTSLV EY+KSLKDRQKR
Sbjct: 559 KLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR 590

BLAST of Cucsat.G15539 vs. NCBI nr
Match: XP_038878138.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g09680 [Benincasa hispida])

HSP 1 Score: 501 bits (1291), Expect = 2.07e-173
Identity = 245/272 (90.07%), Postives = 259/272 (95.22%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQQRGLRPN +TFTALIDGQ RS R+DSAMNTY QMLTMGVKPDLVMYNTLLNGLCKVG+
Sbjct: 324 MQQRGLRPNDVTFTALIDGQCRSGRVDSAMNTYQQMLTMGVKPDLVMYNTLLNGLCKVGE 383

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VN+ARKL+DEMKMVG+KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA
Sbjct: 384 VNEARKLIDEMKMVGLKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 443

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISG CRDG+V+DAERTLREM EAGMKPDDATYTMVIDGYCKKG+VK GFKLLKEMQ NG
Sbjct: 444 LISGLCRDGKVKDAERTLREMTEAGMKPDDATYTMVIDGYCKKGDVKTGFKLLKEMQTNG 503

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG+ EDLL
Sbjct: 504 HNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGRPEDLL 563

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGL+VDYA YTSLV EY+K +KDR+KR
Sbjct: 564 KLRNEKGLVVDYACYTSLVGEYDKCIKDRRKR 595

BLAST of Cucsat.G15539 vs. NCBI nr
Match: XP_022143262.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Momordica charantia])

HSP 1 Score: 499 bits (1284), Expect = 2.30e-172
Identity = 246/272 (90.44%), Postives = 259/272 (95.22%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQQRGL+PN +TFT LI+GQ RS ++DSAMNTY QMLTMGVKPDLVMYNTLLNGLCKVGD
Sbjct: 323 MQQRGLKPNDVTFTTLINGQCRSGQIDSAMNTYQQMLTMGVKPDLVMYNTLLNGLCKVGD 382

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           V+KARKL+ EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD+VAFTA
Sbjct: 383 VSKARKLIGEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDDVAFTA 442

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISG CRDGRV DAERTLREM+EAGMKPDDATYTMVID YCKKG+VKMGFKLLKEMQ NG
Sbjct: 443 LISGLCRDGRVIDAERTLREMMEAGMKPDDATYTMVIDEYCKKGDVKMGFKLLKEMQRNG 502

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED +
Sbjct: 503 HNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDSI 562

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGL+VDYAYYTSLV EY+KSLKDRQKR
Sbjct: 563 KLRNEKGLVVDYAYYTSLVGEYDKSLKDRQKR 594

BLAST of Cucsat.G15539 vs. ExPASy TrEMBL
Match: A0A5A7TWU4 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00320 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 2.55e-180
Identity = 252/272 (92.65%), Postives = 267/272 (98.16%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVKPDLVMYNTLL GLCKVGD
Sbjct: 319 MQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGD 378

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EIRKGMNEEGVVLDNVAFTA
Sbjct: 379 VNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEIRKGMNEEGVVLDNVAFTA 438

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCKKG+VK GFK+LKEMQING
Sbjct: 439 LISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCKKGDVKTGFKMLKEMQING 498

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           HKPGVITYNVLMNGLCKQGQMKNA+MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNAHMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGLI+DYAYYTSLV EY+KSLKDRQKR
Sbjct: 559 KLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR 590

BLAST of Cucsat.G15539 vs. ExPASy TrEMBL
Match: A0A1S3C629 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo OX=3656 GN=LOC103496868 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 2.55e-180
Identity = 252/272 (92.65%), Postives = 267/272 (98.16%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVKPDLVMYNTLL GLCKVGD
Sbjct: 319 MQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGD 378

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           VNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EIRKGMNEEGVVLDNVAFTA
Sbjct: 379 VNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEIRKGMNEEGVVLDNVAFTA 438

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCKKG+VK GFK+LKEMQING
Sbjct: 439 LISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCKKGDVKTGFKMLKEMQING 498

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           HKPGVITYNVLMNGLCKQGQMKNA+MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNAHMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGLI+DYAYYTSLV EY+KSLKDRQKR
Sbjct: 559 KLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR 590

BLAST of Cucsat.G15539 vs. ExPASy TrEMBL
Match: A0A6J1CQA5 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica charantia OX=3673 GN=LOC111013174 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 1.12e-172
Identity = 246/272 (90.44%), Postives = 259/272 (95.22%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           MQQRGL+PN +TFT LI+GQ RS ++DSAMNTY QMLTMGVKPDLVMYNTLLNGLCKVGD
Sbjct: 323 MQQRGLKPNDVTFTTLINGQCRSGQIDSAMNTYQQMLTMGVKPDLVMYNTLLNGLCKVGD 382

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           V+KARKL+ EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD+VAFTA
Sbjct: 383 VSKARKLIGEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDDVAFTA 442

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           LISG CRDGRV DAERTLREM+EAGMKPDDATYTMVID YCKKG+VKMGFKLLKEMQ NG
Sbjct: 443 LISGLCRDGRVIDAERTLREMMEAGMKPDDATYTMVIDEYCKKGDVKMGFKLLKEMQRNG 502

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED +
Sbjct: 503 HNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDSI 562

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
           KLRNEKGL+VDYAYYTSLV EY+KSLKDRQKR
Sbjct: 563 KLRNEKGLVVDYAYYTSLVGEYDKSLKDRQKR 594

BLAST of Cucsat.G15539 vs. ExPASy TrEMBL
Match: A0A6J1F410 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita moschata OX=3662 GN=LOC111441918 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 1.20e-169
Identity = 242/272 (88.97%), Postives = 255/272 (93.75%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M+QRGLR N +TFTALIDGQ RS R+DSAMNTY QML MGVKPDLVMYNTL+NGLCKVGD
Sbjct: 323 MRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLINGLCKVGD 382

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           V+KARKLVDEMKMV MKPDKITYTTLIDGYCKEGD+ESAMEIRKGMNEEGVVLDNVAFTA
Sbjct: 383 VSKARKLVDEMKMVRMKPDKITYTTLIDGYCKEGDIESAMEIRKGMNEEGVVLDNVAFTA 442

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           +ISG CRDGRV DAERTLREM EAGMKPDDATYTMVIDGYCK G+VK GFKLLKEMQ NG
Sbjct: 443 IISGLCRDGRVMDAERTLREMKEAGMKPDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNG 502

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK+G+AED L
Sbjct: 503 HNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFL 562

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
            LRNEKGL+VDYAYYTSLV EY+KSLKDR+KR
Sbjct: 563 HLRNEKGLVVDYAYYTSLVGEYDKSLKDRRKR 594

BLAST of Cucsat.G15539 vs. ExPASy TrEMBL
Match: A0A6J1IYZ9 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxima OX=3661 GN=LOC111481940 PE=4 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 3.42e-169
Identity = 243/272 (89.34%), Postives = 254/272 (93.38%), Query Frame = 0

Query: 1   MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 60
           M+QRGLR N +TFTALIDGQ RS R+DSAMNTY QML MGVKPDLVMYNTLLNGLCKVGD
Sbjct: 323 MRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGD 382

Query: 61  VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 120
           V+KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN EGVVLDNVAFTA
Sbjct: 383 VSKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNVEGVVLDNVAFTA 442

Query: 121 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 180
           +ISG CRDGRV DAE TLREM EAGMKPDDATYTMVIDGYCK G+VK GFKLLKEMQ NG
Sbjct: 443 IISGLCRDGRVMDAEGTLREMKEAGMKPDDATYTMVIDGYCKNGDVKPGFKLLKEMQRNG 502

Query: 181 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 240
           H PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK+G+AED L
Sbjct: 503 HNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFL 562

Query: 241 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 272
            LRNEKGL+VDYAYYTSLV EY+KSLKDR+KR
Sbjct: 563 HLRNEKGLVVDYAYYTSLVGEYDKSLKDRRKR 594

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O044912.4e-8956.62Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
Q0WVK71.8e-4936.19Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FIX32.4e-4933.70Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9T0D66.5e-4735.53Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX... [more]
O045041.2e-4533.21Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_031737521.16.84e-19298.90putative pentatricopeptide repeat-containing protein At1g09680 isoform X2 [Cucum... [more]
XP_004140820.21.63e-18998.90putative pentatricopeptide repeat-containing protein At1g09680 isoform X1 [Cucum... [more]
XP_008457121.15.28e-18092.65PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucum... [more]
XP_038878138.12.07e-17390.07LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g09... [more]
XP_022143262.12.30e-17290.44putative pentatricopeptide repeat-containing protein At1g09680 [Momordica charan... [more]
Match NameE-valueIdentityDescription
A0A5A7TWU42.55e-18092.65Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3C6292.55e-18092.65putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo O... [more]
A0A6J1CQA51.12e-17290.44putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica char... [more]
A0A6J1F4101.20e-16988.97putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita mosc... [more]
A0A6J1IYZ93.42e-16989.34putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxi... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 303..445
e-value: 3.8E-38
score: 133.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 213..301
e-value: 6.5E-31
score: 109.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..212
e-value: 1.4E-16
score: 62.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 161..182
e-value: 4.2E-4
score: 18.3
coord: 289..322
e-value: 1.3E-9
score: 35.7
coord: 219..252
e-value: 1.8E-10
score: 38.4
coord: 184..217
e-value: 1.3E-5
score: 23.1
coord: 359..392
e-value: 1.2E-7
score: 29.4
coord: 394..417
e-value: 9.9E-4
score: 17.1
coord: 254..287
e-value: 8.1E-9
score: 33.1
coord: 325..357
e-value: 3.0E-9
score: 34.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 287..335
e-value: 9.6E-16
score: 57.7
coord: 160..192
e-value: 5.5E-8
score: 32.9
coord: 356..405
e-value: 1.5E-16
score: 60.4
coord: 216..265
e-value: 1.6E-18
score: 66.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..391
score: 11.904029
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..181
score: 8.670445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 12.452094
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 13.252269
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 10.566751
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 12.495939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 13.350921
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 44..162
coord: 161..445
NoneNo IPR availablePANTHERPTHR47932:SF51PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 44..162
NoneNo IPR availablePANTHERPTHR47932:SF51PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 161..445

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15539.T1Cucsat.G15539.T1mRNA
Cucsat.G15539.T2Cucsat.G15539.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding