Cucsat.G15539.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15539.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat
Locationctg2009: 696550 .. 698965 (+)
RNA-Seq ExpressionCucsat.G15539.T1
SyntenyCucsat.G15539.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGGGAGGAATGGTTGGAGTAATGAAACCATGCAGGTATAAAATGCAAATCAAAACTTTACGGTTTCATTCACTATCACTACTCACCGATGAAATTATTTTCCAATCACAGCTCTCATGGAATCACATCCATGCCCAACAATTCTTCCTTCAAACACTCCATTTCCCTCTCCAAACCTTCCTTCCTCTATTCCACATGGCATTCTCCACCACCGCCGGCGGTTTTGGCTGACCCTGTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTTCTCCCTTCCTTCAAACCCCACCATTTCATCGACCTCATCAACCAAAACCCTTTCTCTCTTTCCCCCTCCTCTCTCTTCTCCTTCTTCAATTGGCTCTCTTCTATCCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCTAATTTCCTCTCTGCCCATCAAATGTTCCAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACACTGCAGGTACGCGTTGTTCGAATTTTGTTTTTGATGCTTTGATGATTGCATATTGGGATTCCGGATTCGTCTCCGATGCTATTCAGTGTTTTAGGTTGGTTAGGAATAGTAATTTTCAAATCCCGTTTCATGGTTGCGGGTACTTGCTTGATAAAATGATAAATTCGAACTCCCCTGTTACAATTTGGACGTTTTATTCGGAAATTTTGGAATATGGGTTCCCGCCCAAAGTGCAGTATTACAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTATTAGAGATGCCAAGTTGATTTTTAATGAAATTAGGAAGAGGGGTTTGCGTCCTACAACTGTTAGTTTCAATACCTTGATTAATGGGCTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGACCATGGAAGAGAATAGAATATATCCTGATGTTTTCACTTACAGCGTTCTGATTCATGGATTATGCAAGGAAGGTAGGTTAGATGTTGCAGAACAACTGTTTGATGAAATGCAGCAGAGAGGATTGAGACCAAACGGCATTACGTTCACCGCATTGATTGACGGGCAATATAGGAGCAGACGAATGGACTCAGCTATGAACACTTATCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCTGATAAAATCACTTACACCACACTCATAGACGGTTATTGCAAAGAGGGAGATCTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGAGATGCAGAGAGGACCTTGAGGGAGATGGTGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATCGATGGGTATTGCAAGAAAGGCAATGTTAAGATGGGGTTTAAGCTGCTGAAAGAGATGCAAATCAATGGCCATAAACCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAGTAGATTATGCGTATTATACTTCTTTAGTCAGTGAATACAATAAATCCTTAAAGGATCGTCAAAAGAGGTGATGAAAGATTTGTTGTTGAGTGTTAACTTTTTCAGTTTGCAAGAGAATCCACATTGTAGATAAAGGGTTGTCTATGCATATAGGAGCTTGGAACTTCTTAAAAATTAAAAAAGAAGTGAAGGAGAAGGACAATGTGTTCAAATTTCATGGCGGCAATCTAGATGAGGTATCAACTCTTACAACCTTCTTGATAATCAAATTATGGAATGGTGGGTAGAGTTAGACATTTATCTCTCTAGATTAGTTAAGGTACACATGCTCTGAAACGAGAGAGAAAATGCTTTGCGTAACTCTTCTTTTTATACCGTTTGGATAATCGTCCATGGACGAGCTTGATTATAGGGAGTTGTTTGAAAATTTCTATTCTTATTTGAAAATTGTTTTTTCATCTGTGTATTGTAAAGCCCTCCCCAGGTAGGCACTAGATGCATGTCCACGCCTAAGGCTCATTCGAACAATTTTCATTATTTTTAAAAATATAATAATTTTAGTTTTTTCTTTCTTTATTAAT

Coding sequence (CDS)

ATGAAATTATTTTCCAATCACAGCTCTCATGGAATCACATCCATGCCCAACAATTCTTCCTTCAAACACTCCATTTCCCTCTCCAAACCTTCCTTCCTCTATTCCACATGGCATTCTCCACCACCGCCGGCGGTTTTGGCTGACCCTGTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTTCTCCCTTCCTTCAAACCCCACCATTTCATCGACCTCATCAACCAAAACCCTTTCTCTCTTTCCCCCTCCTCTCTCTTCTCCTTCTTCAATTGGCTCTCTTCTATCCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCTAATTTCCTCTCTGCCCATCAAATGTTCCAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACACTGCAGGTAGGTTAGATGTTGCAGAACAACTGTTTGATGAAATGCAGCAGAGAGGATTGAGACCAAACGGCATTACGTTCACCGCATTGATTGACGGGCAATATAGGAGCAGACGAATGGACTCAGCTATGAACACTTATCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCTGATAAAATCACTTACACCACACTCATAGACGGTTATTGCAAAGAGGGAGATCTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGAGATGCAGAGAGGACCTTGAGGGAGATGGTGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATCGATGGGTATTGCAAGAAAGGCAATGTTAAGATGGGGTTTAAGCTGCTGAAAGAGATGCAAATCAATGGCCATAAACCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAGTAGATTATGCGTATTATACTTCTTTAGTCAGTGAATACAATAAATCCTTAAAGGATCGTCAAAAGAGGTGA

Protein sequence

MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR
Homology
BLAST of Cucsat.G15539.T1 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.8e-105
Identity = 225/596 (37.75%), Postives = 307/596 (51.51%), Query Frame = 0

Query: 20  SFKHSISLSKPSFLYSTWHSPPPPAVL---ADPVLAAVSTAINNAQTKPL--------AS 79
           S  H    S+ SFL STW+S    +      DPVL  +S AI ++   P           
Sbjct: 12  SQSHPQRFSRASFLLSTWYSQESVSAADNDDDPVLVKLSVAIRDSYKDPPLEFSSFTDCP 71

Query: 80  SLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAH 139
           S+R++LPS   HH +DLIN NP SL   S+F+FF ++SS P FR T ++Y  +A FL+ H
Sbjct: 72  SIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVH 131

Query: 140 QMFQECQSIIRFLVSRKGKDSAASVFAAILD----------------------------- 199
           +MF E QS+I  +VSRKGK+SA+SVF ++++                             
Sbjct: 132 EMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQ 191

Query: 200 ------------------------------------------------------------ 259
                                                                       
Sbjct: 192 CFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251

Query: 260 ------------------------------------------------------------ 319
                                                                       
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311

Query: 320 ----------TAGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 379
                        ++D A  LFDEM +RGL PN + FT LI G  R+  +D    +Y +M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 380 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 439
           L+ G++PD+V+YNTL+NG CK GD+  AR +VD M   G++PDKITYTTLIDG+C+ GD+
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 440 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 446
           E+A+EIRK M++ G+ LD V F+AL+ G C++GRV DAER LREM+ AG+KPDD TYTM+
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491

BLAST of Cucsat.G15539.T1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-53
Identity = 100/286 (34.97%), Postives = 171/286 (59.79%), Query Frame = 0

Query: 161 AGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 220
           AG +DVA  LFD+M+ +G  PN +T+  LIDG  + R++D        M   G++P+L+ 
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277

Query: 221 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 280
           YN ++NGLC+ G + +   ++ EM   G   D++TY TLI GYCKEG+   A+ +   M 
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 281 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 340
             G+    + +T+LI   C+ G +  A   L +M   G+ P++ TYT ++DG+ +KG + 
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 341 MGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 400
             +++L+EM  NG  P V+TYN L+NG C  G+M++A  +LE M   G++PD ++Y+ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 401 EGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLVSEYNKSLKDRQ 444
            G C++   ++ L+++    EKG+  D   Y+SL+  + +  + ++
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503

BLAST of Cucsat.G15539.T1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.4e-52
Identity = 102/301 (33.89%), Postives = 173/301 (57.48%), Query Frame = 0

Query: 141 LVSRKGKDSAASVFAAILDTAGR---LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSR 200
           ++ RKG    + ++ +I+    R   L  AE+ F EM ++G+ P+ + +T LIDG  +  
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365

Query: 201 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 260
            + +A   +++M +  + PD++ Y  +++G C++GD+ +A KL  EM   G++PD +T+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425

Query: 261 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 320
            LI+GYCK G ++ A  +   M + G   + V +T LI G C++G +  A   L EM + 
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485

Query: 321 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNA 380
           G++P+  TY  +++G CK GN++   KL+ E +  G     +TY  LM+  CK G+M  A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545

Query: 381 NMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLVSE 436
             +L+ ML  G+ P  +T+N+L+ G C +G  ED  KL N    KG+  +   + SLV +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605

BLAST of Cucsat.G15539.T1 vs. ExPASy Swiss-Prot
Match: Q9FKR3 (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX=3702 GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-48
Identity = 113/369 (30.62%), Postives = 195/369 (52.85%), Query Frame = 0

Query: 95  PSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSR---------- 154
           PS  +SFF W  S+P+ +H+ QS   M   L+ H+ F+    ++  L  R          
Sbjct: 60  PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119

Query: 155 -------KGKDSAASVFAAIL---DTAGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 214
                  +  +  + VF+ ++     AG ++ +  +F++++  GL+P+    T L++   
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179

Query: 215 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKI 274
           + R  D+    + +M+ +GV  ++ +YN L++   K GD  KA KL+ EM+  G+ PD  
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239

Query: 275 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 334
           TY TLI  YCK+     A+ ++  M   GV  + V + + I GF R+GR+R+A R  RE 
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE- 299

Query: 335 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM 394
           ++  +  +  TYT +IDGYC+  ++    +L + M+  G  PGV+TYN ++  LC+ G++
Sbjct: 300 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 359

Query: 395 KNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSL 441
           + AN LL  M    + PD+IT N L+  +CK       +K++    E GL +D   Y +L
Sbjct: 360 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 419

BLAST of Cucsat.G15539.T1 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-48
Identity = 97/278 (34.89%), Postives = 161/278 (57.91%), Query Frame = 0

Query: 169 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 228
           +++++MQ+ G+ PN  T+  +++   +  R   A   + +M   GV  ++V YNTL+ GL
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313

Query: 229 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 288
           C+   +N+A K+VD+MK  G+ P+ ITY TLIDG+C  G L  A+ + + +   G+    
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373

Query: 289 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 348
           V +  L+SGFCR G    A + ++EM E G+KP   TYT++ID + +  N++   +L   
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433

Query: 349 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG- 408
           M+  G  P V TY+VL++G C +GQM  A+ L ++M+     P+++ YN ++ G+CK G 
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493

Query: 409 --KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 444
             +A  LLK   EK L  + A Y  ++    K  K ++
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

BLAST of Cucsat.G15539.T1 vs. NCBI nr
Match: XP_031737521.1 (putative pentatricopeptide repeat-containing protein At1g09680 isoform X2 [Cucumis sativus] >KAE8650482.1 hypothetical protein Csa_009738 [Cucumis sativus])

HSP 1 Score: 872 bits (2253), Expect = 0.0
Identity = 440/445 (98.88%), Postives = 442/445 (99.33%), Query Frame = 0

Query: 1   MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINN 60
           MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPP A LADPVLAAVSTAINN
Sbjct: 1   MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINN 60

Query: 61  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 120
           AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA
Sbjct: 61  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 120

Query: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGRLDVAEQLFDEMQQRGLR 180
           MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGRLDVAEQLFDEMQQRGLR
Sbjct: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGRLDVAEQLFDEMQQRGLR 180

Query: 181 PNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 240
           PNGITFTALIDGQ RSRR+DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL
Sbjct: 181 PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 240

Query: 241 VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 300
           VDEM+MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR
Sbjct: 241 VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 300

Query: 301 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 360
           DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT
Sbjct: 301 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 360

Query: 361 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 420
           YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG
Sbjct: 361 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 420

Query: 421 LIVDYAYYTSLVSEYNKSLKDRQKR 445
           LIVDYAYYTSLVSEYNKSLKDRQKR
Sbjct: 421 LIVDYAYYTSLVSEYNKSLKDRQKR 445

BLAST of Cucsat.G15539.T1 vs. NCBI nr
Match: XP_004140820.2 (putative pentatricopeptide repeat-containing protein At1g09680 isoform X1 [Cucumis sativus])

HSP 1 Score: 806 bits (2083), Expect = 1.28e-290
Identity = 440/604 (72.85%), Postives = 442/604 (73.18%), Query Frame = 0

Query: 1   MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINN 60
           MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPP A LADPVLAAVSTAINN
Sbjct: 1   MKLFSNHSSHGITSMPNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINN 60

Query: 61  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 120
           AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA
Sbjct: 61  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 120

Query: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG------------------ 180
           MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG                  
Sbjct: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 300

Query: 301 ---------------------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 360
                                RLDVAEQLFDEMQQRGLRPNGITFTALIDGQ RSRR+DS
Sbjct: 301 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 360

Query: 361 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLID 420
           AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM+MVGMKPDKITYTTLID
Sbjct: 361 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLID 420

Query: 421 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 445
           GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP
Sbjct: 421 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 480

BLAST of Cucsat.G15539.T1 vs. NCBI nr
Match: XP_008457121.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucumis melo] >KAA0047378.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK14055.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 736 bits (1901), Expect = 3.77e-263
Identity = 399/590 (67.63%), Postives = 418/590 (70.85%), Query Frame = 0

Query: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLL 74
           M NNSSFK SISLSKPSF YSTWHSPPPPA +ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60

Query: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120

Query: 135 QSIIRFLVSRKGKDSAASVFAAILDTAG-------------------------------- 194
           QSIIRFLVSRKGKDSAASVFAAILD AG                                
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNILINKFCKEGSTR 240

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 241 DAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEENRIYPDVFTYSVLI 300

Query: 315 -------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 374
                  RLD AEQLFDEMQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVK
Sbjct: 301 HRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVK 360

Query: 375 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 434
           PDLVMYNTLL GLCKVGDVNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EI
Sbjct: 361 PDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEI 420

Query: 435 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 445
           RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCK
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCK 480

BLAST of Cucsat.G15539.T1 vs. NCBI nr
Match: XP_038878138.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g09680 [Benincasa hispida])

HSP 1 Score: 687 bits (1772), Expect = 1.84e-243
Identity = 377/595 (63.36%), Postives = 403/595 (67.73%), Query Frame = 0

Query: 15  MPNNSSF---KHSISLSKPSFLYSTWHSPPPP--AVLADPVLAAVSTAINNAQTKPLASS 74
           M NNS F   + SI LSKPSF YSTWHSPPPP  A  ADPVLAAVST+I NAQTKPLASS
Sbjct: 1   MANNSLFSLSRFSIPLSKPSFRYSTWHSPPPPPAAAAADPVLAAVSTSITNAQTKPLASS 60

Query: 75  LRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQ 134
           LRRLLPSFKPHH IDLIN NPFSLSP SLFSFFNWLSS+PTFRHT Q+YCAMANFLSAHQ
Sbjct: 61  LRRLLPSFKPHHLIDLINHNPFSLSPLSLFSFFNWLSSVPTFRHTPQAYCAMANFLSAHQ 120

Query: 135 MFQECQSIIRFLVSRKGKDSAASVFAAILDTAG--------------------------- 194
           MF++ QS++RFLVSRKGKDSAASVFAA+L+ +G                           
Sbjct: 121 MFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDSGFVSDAIQC 180

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 181 FRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYFNILINKFCK 240

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 241 EGSIRDARLIFDEIGKRGLRPTTVSFNTLINGFCKSRNLDEGFRLKKIMEENRIYPDVFT 300

Query: 315 ------------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML 374
                       RLD AE+LFDEMQQRGLRPN +TFTALIDGQ RS R+DSAMNTY QML
Sbjct: 301 YSVLIHGLCKEGRLDDAERLFDEMQQRGLRPNDVTFTALIDGQCRSGRVDSAMNTYQQML 360

Query: 375 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 434
           TMGVKPDLVMYNTLLNGLCKVG+VN+ARKL+DEMKMVG+KPDKITYTTLIDGYCKEGDLE
Sbjct: 361 TMGVKPDLVMYNTLLNGLCKVGEVNEARKLIDEMKMVGLKPDKITYTTLIDGYCKEGDLE 420

Query: 435 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 445
           SAMEIRKGMNEEGVVLDNVAFTALISG CRDG+V+DAERTLREM EAGMKPDDATYTMVI
Sbjct: 421 SAMEIRKGMNEEGVVLDNVAFTALISGLCRDGKVKDAERTLREMTEAGMKPDDATYTMVI 480

BLAST of Cucsat.G15539.T1 vs. NCBI nr
Match: XP_023526542.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682 bits (1760), Expect = 3.07e-241
Identity = 380/599 (63.44%), Postives = 401/599 (66.94%), Query Frame = 0

Query: 10  HGITSMPNNSSFK---HSISL-SKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKP 69
           H ITSM  NS+FK    S SL SKPSF YSTWHSP PPA   DPVLAAVSTAINN +TKP
Sbjct: 23  HRITSMAANSTFKLSNFSNSLPSKPSFRYSTWHSPLPPAAAGDPVLAAVSTAINNVETKP 82

Query: 70  LASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFL 129
           LASSLRRLLPSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHT QSYCAMANFL
Sbjct: 83  LASSLRRLLPSFKPHHFIDLINHNPFSLSPVSLFSFFNWLSSVPTFRHTLQSYCAMANFL 142

Query: 130 SAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTA------------------------ 189
            AHQMF+E QSI+RFLVSRKGKDSAAS+FAAIL+                          
Sbjct: 143 CAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISD 202

Query: 190 ------------------------------------------------------------ 249
                                                                       
Sbjct: 203 AIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNILIN 262

Query: 250 ------------------------------------------------------------ 309
                                                                       
Sbjct: 263 KFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEESRIYP 322

Query: 310 ---------------GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTY 369
                          G++D AEQLFDEM+QRGLR N +TFTALIDGQ RS R+DSAMNTY
Sbjct: 323 DVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSAMNTY 382

Query: 370 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 429
            QML MGVKPDLVMYNTLLNGLCKVGDV+KARKLVDEMKMVGMKPDKITYTTLIDGYCKE
Sbjct: 383 QQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 442

Query: 430 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 445
           GDLESAMEIRKGMNEEGVVLDNVAFTA+ISG CRDGRV DAERTLREM EAGMKPDDATY
Sbjct: 443 GDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPDDATY 502

BLAST of Cucsat.G15539.T1 vs. ExPASy TrEMBL
Match: A0A5A7TWU4 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00320 PE=4 SV=1)

HSP 1 Score: 736 bits (1901), Expect = 1.82e-263
Identity = 399/590 (67.63%), Postives = 418/590 (70.85%), Query Frame = 0

Query: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLL 74
           M NNSSFK SISLSKPSF YSTWHSPPPPA +ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60

Query: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120

Query: 135 QSIIRFLVSRKGKDSAASVFAAILDTAG-------------------------------- 194
           QSIIRFLVSRKGKDSAASVFAAILD AG                                
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNILINKFCKEGSTR 240

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 241 DAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEENRIYPDVFTYSVLI 300

Query: 315 -------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 374
                  RLD AEQLFDEMQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVK
Sbjct: 301 HRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVK 360

Query: 375 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 434
           PDLVMYNTLL GLCKVGDVNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EI
Sbjct: 361 PDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEI 420

Query: 435 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 445
           RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCK
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCK 480

BLAST of Cucsat.G15539.T1 vs. ExPASy TrEMBL
Match: A0A1S3C629 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo OX=3656 GN=LOC103496868 PE=4 SV=1)

HSP 1 Score: 736 bits (1901), Expect = 1.82e-263
Identity = 399/590 (67.63%), Postives = 418/590 (70.85%), Query Frame = 0

Query: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLL 74
           M NNSSFK SISLSKPSF YSTWHSPPPPA +ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60

Query: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120

Query: 135 QSIIRFLVSRKGKDSAASVFAAILDTAG-------------------------------- 194
           QSIIRFLVSRKGKDSAASVFAAILD AG                                
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNILINKFCKEGSTR 240

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 241 DAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEENRIYPDVFTYSVLI 300

Query: 315 -------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 374
                  RLD AEQLFDEMQ+RGLRPNG+TFTALIDGQ + R++DSAMNTYHQMLTMGVK
Sbjct: 301 HRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVK 360

Query: 375 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 434
           PDLVMYNTLL GLCKVGDVNKARKL+DEM+MVGMKPDKI+YTTLIDGYCKEGDLESA+EI
Sbjct: 361 PDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEI 420

Query: 435 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 445
           RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM+EAGMKPDDATYTMVIDGYCK
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCK 480

BLAST of Cucsat.G15539.T1 vs. ExPASy TrEMBL
Match: A0A6J1IYZ9 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxima OX=3661 GN=LOC111481940 PE=4 SV=1)

HSP 1 Score: 677 bits (1746), Expect = 7.70e-240
Identity = 378/594 (63.64%), Postives = 396/594 (66.67%), Query Frame = 0

Query: 15  MPNNSSFK---HSISL-SKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSL 74
           M  NS+FK    S SL SKPSF YSTWHSPPPPA  ADPVLAAVSTAINN +TKPLASSL
Sbjct: 1   MAANSTFKLSNFSSSLPSKPSFRYSTWHSPPPPAAAADPVLAAVSTAINNVETKPLASSL 60

Query: 75  RRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQM 134
           RRLLPSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHT QSYCAMANFL  HQM
Sbjct: 61  RRLLPSFKPHHFIDLINHNPFSLSPVSLFSFFNWLSSVPTFRHTLQSYCAMANFLCTHQM 120

Query: 135 FQECQSIIRFLVSRKGKDSAASVFAAILDTA----------------------------- 194
           F+E QSIIRFLVSRKGKDSAAS+FAAIL+                               
Sbjct: 121 FEESQSIIRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCF 180

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 181 RLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNILINKFCKQ 240

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 241 GSIRDARLIFDEIGKRGFRPTTVSFNTLINGLCKSRNLDESFRLKKAMEENRIYPDVYTY 300

Query: 315 ----------GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLT 374
                     GR+D AEQLFDEM+QRGLR N +TFTALIDGQ RS R+DSAMNTY QML 
Sbjct: 301 SVLIHGLCKEGRVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLA 360

Query: 375 MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLES 434
           MGVKPDLVMYNTLLNGLCKVGDV+KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLES
Sbjct: 361 MGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLES 420

Query: 435 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVID 445
           AMEIRKGMN EGVVLDNVAFTA+ISG CRDGRV DAE TLREM EAGMKPDDATYTMVID
Sbjct: 421 AMEIRKGMNVEGVVLDNVAFTAIISGLCRDGRVMDAEGTLREMKEAGMKPDDATYTMVID 480

BLAST of Cucsat.G15539.T1 vs. ExPASy TrEMBL
Match: A0A6J1F410 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita moschata OX=3662 GN=LOC111441918 PE=4 SV=1)

HSP 1 Score: 672 bits (1734), Expect = 5.12e-238
Identity = 369/586 (62.97%), Postives = 393/586 (67.06%), Query Frame = 0

Query: 19  SSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLLPSFK 78
           S+F +S+  SKPSF YSTWHSP PPA  ADPVLAAVSTAINN +TKPLASSLRRLLPSFK
Sbjct: 10  SNFSNSLP-SKPSFRYSTWHSPLPPAAAADPVLAAVSTAINNVETKPLASSLRRLLPSFK 69

Query: 79  PHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSII 138
           PHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHT QSYCAMANFL  HQMF+E QSI+
Sbjct: 70  PHHFIDLINHNPFSLSPVSLFSFFNWLSSVPTFRHTLQSYCAMANFLCVHQMFEESQSIV 129

Query: 139 RFLVSRKGKDSAASVFAAILDTA------------------------------------- 198
           RFLVSRKGKDSAAS+FAAIL+                                       
Sbjct: 130 RFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCFRLVRKRNF 189

Query: 199 ------------------------------------------------------------ 258
                                                                       
Sbjct: 190 QIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNILINKFCKQGSIRDARL 249

Query: 259 ------------------------------------------------------------ 318
                                                                       
Sbjct: 250 IFDEIGKRGFRPTAVSFNTLINGLCKSRNLDECFRLKKAMEENRIHPDVYTYSVLIHGLC 309

Query: 319 --GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLV 378
             G++D AEQLFDEM+QRGLR N +TFTALIDGQ RS R+DSAMNTY QML MGVKPDLV
Sbjct: 310 KQGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLAMGVKPDLV 369

Query: 379 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 438
           MYNTL+NGLCKVGDV+KARKLVDEMKMV MKPDKITYTTLIDGYCKEGD+ESAMEIRKGM
Sbjct: 370 MYNTLINGLCKVGDVSKARKLVDEMKMVRMKPDKITYTTLIDGYCKEGDIESAMEIRKGM 429

Query: 439 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 445
           NEEGVVLDNVAFTA+ISG CRDGRV DAERTLREM EAGMKPDDATYTMVIDGYCK G+V
Sbjct: 430 NEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPDDATYTMVIDGYCKNGDV 489

BLAST of Cucsat.G15539.T1 vs. ExPASy TrEMBL
Match: A0A6J1CQA5 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica charantia OX=3673 GN=LOC111013174 PE=4 SV=1)

HSP 1 Score: 645 bits (1665), Expect = 1.55e-227
Identity = 363/589 (61.63%), Postives = 389/589 (66.04%), Query Frame = 0

Query: 21  FKHSISLS----KPSFLYSTWHSPPPPAVL-ADPVLAAVSTAINNAQTKPLASSLRRLLP 80
           FK S SLS    K SF YSTW+SPPPP+    D +LAAVSTAINNAQTKPLASSLRRLLP
Sbjct: 6   FKLSDSLSRLPPKSSFRYSTWYSPPPPSPPHTDDLLAAVSTAINNAQTKPLASSLRRLLP 65

Query: 81  SFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ 140
           S + HH ++L+N NPFSL P SLFSFFNWLSS PTFRHT QSYCAMA+FL AH+MF E  
Sbjct: 66  SLRAHHVVNLLNHNPFSLHPLSLFSFFNWLSSQPTFRHTVQSYCAMAHFLCAHRMFAESH 125

Query: 141 SIIRFLVSRKGKDSAASVFAAILDTAG--------------------------------- 200
           SI+RFLVSRKGKDSA+S+FAAIL+ AG                                 
Sbjct: 126 SIVRFLVSRKGKDSASSIFAAILEVAGTRSSNLVFDALMIAYADSGFVSDAIQCFRLVRK 185

Query: 201 ------------------------------------------------------------ 260
                                                                       
Sbjct: 186 YNFQIPSRGCGYLLDKMMNSNSTVSIWTFYSEIMDSGFPPNVKYFNILINKFCKEGNIRD 245

Query: 261 ------------------------------------------------------------ 320
                                                                       
Sbjct: 246 ARLIFFEIGKRGLRPTTVSFNTLINGLCKSQNLDEGFRLKKIMEENRIYPDVFTYSVLIH 305

Query: 321 ------RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKP 380
                 RL  AEQLFDEMQQRGL+PN +TFT LI+GQ RS ++DSAMNTY QMLTMGVKP
Sbjct: 306 GLCKEGRLYDAEQLFDEMQQRGLKPNDVTFTTLINGQCRSGQIDSAMNTYQQMLTMGVKP 365

Query: 381 DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 440
           DLVMYNTLLNGLCKVGDV+KARKL+ EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR
Sbjct: 366 DLVMYNTLLNGLCKVGDVSKARKLIGEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 425

Query: 441 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 445
           KGMNEEGVVLD+VAFTALISG CRDGRV DAERTLREM+EAGMKPDDATYTMVID YCKK
Sbjct: 426 KGMNEEGVVLDDVAFTALISGLCRDGRVIDAERTLREMMEAGMKPDDATYTMVIDEYCKK 485

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O044913.8e-10537.75Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
Q9FIX31.2e-5334.97Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q0WVK78.4e-5233.89Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FKR32.5e-4830.62Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX... [more]
Q9T0D67.4e-4834.89Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_031737521.10.098.88putative pentatricopeptide repeat-containing protein At1g09680 isoform X2 [Cucum... [more]
XP_004140820.21.28e-29072.85putative pentatricopeptide repeat-containing protein At1g09680 isoform X1 [Cucum... [more]
XP_008457121.13.77e-26367.63PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucum... [more]
XP_038878138.11.84e-24363.36LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g09... [more]
XP_023526542.13.07e-24163.44putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo s... [more]
Match NameE-valueIdentityDescription
A0A5A7TWU41.82e-26367.63Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3C6291.82e-26367.63putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo O... [more]
A0A6J1IYZ97.70e-24063.64putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxi... [more]
A0A6J1F4105.12e-23862.97putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita mosc... [more]
A0A6J1CQA51.55e-22761.63putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica char... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 303..445
e-value: 3.8E-38
score: 133.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 213..301
e-value: 6.5E-31
score: 109.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..212
e-value: 1.4E-16
score: 62.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 161..182
e-value: 4.2E-4
score: 18.3
coord: 289..322
e-value: 1.3E-9
score: 35.7
coord: 219..252
e-value: 1.8E-10
score: 38.4
coord: 184..217
e-value: 1.3E-5
score: 23.1
coord: 359..392
e-value: 1.2E-7
score: 29.4
coord: 394..417
e-value: 9.9E-4
score: 17.1
coord: 254..287
e-value: 8.1E-9
score: 33.1
coord: 325..357
e-value: 3.0E-9
score: 34.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 287..335
e-value: 9.6E-16
score: 57.7
coord: 160..192
e-value: 5.5E-8
score: 32.9
coord: 356..405
e-value: 1.5E-16
score: 60.4
coord: 216..265
e-value: 1.6E-18
score: 66.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..391
score: 11.904029
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..181
score: 8.670445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 12.452094
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 13.252269
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 10.566751
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 12.495939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 13.350921
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 44..162
coord: 161..445
NoneNo IPR availablePANTHERPTHR47932:SF51PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 44..162
NoneNo IPR availablePANTHERPTHR47932:SF51PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 161..445

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15539Cucsat.G15539gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15539.T1.E1Cucsat.G15539.T1.E1exon
Cucsat.G15539.T1.E2Cucsat.G15539.T1.E2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15539.T1.C1Cucsat.G15539.T1.C1CDS
Cucsat.G15539.T1.C2Cucsat.G15539.T1.C2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15539.T1Cucsat.G15539.T1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding