Cucsat.G13879 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATTTACCGCAGGCAAATATAATAGAGTAAAGGGAGTACCCTCCTCGGAAGTAACTATTTTTAAAATTTTGTGTTTCCTCACATCCTTAGTTATCAACTCCCTCACCACTTCCTTTTTCTCTCCGCCACTATCCGGTGCTTCAATGGCGTTGACACTGAATACACTTCCATCTCTAAGATTGTCCAGCATCCATGCCAATAGAGTTCGATTTCAATCTTCTTTATCGCCAGTTTCTGTTTCTTTTTCTAGTGAGTTTCACTCTCTAATGCTTTACTGATTTCTGCAAACAACCAAACCAAATTGAAACGCGTTCATATCCCATAGCCTTCGAATTGAAGAATGAGCGTTTTCATTTAAGCCCTATGTTACTTCCATTGTCCTTCCAATTTTCTTTTTCTTCTTCACGGATTTCTCTGGCTTCCATGTCGATTTTGAGATATTAAGTGTTAGTTCTTATTTCTACTGGTAACGACAATTGTTCATTGTTCTAGGAAGGAGGCTCTCGGTTGTTGCTGCTGAAACTGACGCGAATGAAGGTACCTGTTGCTTTTTTTTTTTTTCTTTTTACATAGTTTGGTTCTTTTTTTTTTTCTTTTTTTATGTTGACCGGTGGAATACTTTGACTCTCGGCAGTTTAGATAATTTCGAGAAATTTGCAGAATCGATTTAATTGGAGCTGTCGTATTTACATTTTTCTTATTTGTTTTGATCAGTTAAATCTAAGGCGTCAGATAAAGCGCCGGCAGGTGGTGGTTCGAGCTTCAACCAGCTTCTTGGAATTAAAGGCGCTGCGCAAGAAACTGTGAGTTACCTTCATGTTCTCAGCTTGTTTTTTAGGAAGATTTGAATGTAAGTCCTTAATAAATTCTTCATGTGCACTTTATGCAGAATAAATGGAAGATTCGACTTCAATTGACAAAGCCTGTTACATGGCCGCCCTTGGTTTGGGGGGTAGTTTGTGGTGCTGCTGCTTCTGGTACTCATTTTGTACATACTGAGACACTAAAATTGCATATGAAAAGTTGTTGATGAACTACTAACACGTATTACTATCAACTTACTTCCTAGTCATGATGAAAATTAGCGAGTTCTTCTCTTTTCAGAACTTTAAAATCTATTCTCGTGTTGTGTATTGTATGGTCAAATGCATCAGATGGTGGTCAAATGATTGATTACGCATATAGATCAAATGGGGACAGTACTAACTGATCTTTATTATGCTTTATTGATTAGTTTCCCCATCGAACTATTGAATATGGCTTCAACGATACATTATTTTTTTACAGGTAACTTCCATTGGACTATTGAGGATGTGGCAAAATCAATTGCTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTATACGCAGGTGAGCTCTCTTTGATGTAAAGCTTTCCTATGACTCATGAAAGTATTCAAGCACAAATAAGATAGACACGGTACTTTGGTTTTTTAGACAATCAATGATTGGTATGATCGAGAGATTGATGCAATTAATGAACCTTATCGTCCAATCCCTTCTGGTGCAATATCTGAGAATGAGGTATGAGTAAACCACTTGATATCCATTGACAGAGGCATATATGGTCCTTCCTTACCGGTTTCTTCCTTTCACATATTTGATCAGGTTATAACTCAAATATGGGTGTTGCTTCTAGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGTAGGTTCATAGAATTTGTGGAACTCGTCTTTCATGTCGACTGTTTTTCTTAAACTTCGTCCTTATTCTTCTCAGGCAGGACACGACTTTCCTACAGTCTTTTACCTTGCTCTAGGTGGCTCTTTGTTATCATATATATACTCTGCTCCACCTCTAAAGGTAACAAACAAAAGTTTAGTGTTTCTAAATTGGATCTTCTGGATGCTAAGAACATTTATTTTGTGGTTGCAGCTAAAACAAAATGGATGGATTGGAAATTTTGCGCTTGGAGCTAGTTATATTAGTTTACCATGGTGAGAAATCCTGTGATCTGTAGTTATAGGTAAATTGACATGCATTGTGAAGGATAAAGTCAATCAACCATTTCAATCTGTAATTGACTGGTTGATGAAGTCGATTGTGTTTCATATGAAAATTTGAAAACTTTCTTTGTGTTTAGTTTGCTTCATCTGAAGTCAATTTTCTTCTTTGTAGTGTTCACTCATTTTTTGAATTCCCTCCTACTTTTGAGCATATTGTTATCCCAGATAAAAGCTGATCGAAAGATGTATCCTGTGTATTGACCATGAAATCTATTTGCCATGATTAACACTACCCGCACAAATTTATTACTTATCCGCTTATAATGCACTTTGAATGGGGCCTCGAGTGTTGAACTCAAGTCCTATATATGGAACCATCAATCGATGGCTAGTTTGCCCTTTGCGGCTATCGGCAATTTCTTTTCTGTGTAAAGTTTATTGGATTGTTCCAGGCTCCACATTAATCATACTTATCACAAATTTCTCATTCTTTATAATGCGATAAGTTTGCCTTTTCCAGTAACAGCCAATTTTCAATCTCAGGTGGGCAGGTCAAGCTTTATTTGGGACTCTCACTCCTGATATTATCGTTCTCACACTCTTGTACAGCATAGCTGGTGTATGCTTCTCAATTTATTTTTGAGTTCCTAACTTCAAAAAATCCAATCCTAATCCGACTTCTGCTTTGTCTTAATCAGTTAGGAATAGCCATAGTAAATGATTTCAAAAGTGTTGAGGGCGATAGAGCTTTAGGACTTCAGGTATTTCATTCTAAAACACACTTTTTGATTACGTTAAATTAGTTTAGGCCTTATCAGGTTGTTTTTATTCTGTTATTCTATAGTCATCTTTTGTTATTTACTGCCCTTACAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGGGCTATTGACATAACTCAATTATCTGTTGCTGGTAATTCATTTAGTACTTTTTATTCCTAAGGGATTCTCTCTTTAGAACAATGCGCAAGTTTAAAGCACACTATATCATTTTCTGATTGTACCGAGAAAATAAAAATACAAGTTGCTCGTTTCTTGGCTTCTGCCTTTCTGTAATATACATTTTGAAGGTTCTTCACTTGTTTGGGCTTCATCTTTTTGTACATGCATCAGTTCAAATAATCTTGTAACAATTGTATCCTATCATCCAATATCCGTACATCTACAAGATATGTCTTCAACTCTCAACGAAGCAGTTAACTGATAAGGACAAATGTCCCAAAAGTTTGTATGCAACAAAGAAAATATTAAACATTTGGCATTCTGATTGTTGGAAGGAAGAATTGGTCGGTCTATCCTTCGGTTCTCTTGCAAAATAATTCCTGTATCTCAATCAGAAAGATGGCGTTCTTCGGCTAAAGTTCCAAAAACATTTCTCTTAGCTTACTTCTATGAACTTGCATTATTGTAGGAGACCACTTATGGGACTTTGATACTAAAAGCTAAAACTATTATCTTGCCATGTTAGATCAAAAGAATTCTTATTTGTTTGCAATGTAGATTGAGAAATCACAAGCACTATTATAAAGTATAATGTAGATGCAAGAGTTTGATTTGGAATTGGTTAAAGACTGTTCCCTTTAATATATTTGAAATGAATGTGACTACTAATAATGTTCACTTATTGCAGGTTATCTGTTGGGAGCCGGCAAGCCGTATTACGCATTAGCACTGCTCGCTCTTATTGGTCCCCAAGTTTTCTTCCAGGTAAATACTTTAAAGAATTGTCATATGGTCAGTCTTCTCTTGAGTAGGCAGGCGCTACTGAAAACTGAACATAGTTAAGTACAACCTTACGTACTATGTACAAAGGAACATTCAGTATAGTGAGCCCTATATAATTTAGCAACTTAAAACAAAAGTATGCGTGTCAGAATGATAACACTTTTTAATATGCAAGTCAGGTTACTAGTCTTTGCAATAACGACAGGATCGGATCAACGGTATAGTAATGTGAGGTCTTATTATTTGTCGTTGCAAATTCCGTTAGCGATCTGGTCAACCATGCAGTAATTTGAGGTCTTATTTCCAATTGAATATTTGATGCCGCTCGCTCTCTATATATATGTAATTATAATTGGATGGATGTAATTATAATTGGATGGATGTGTATGCTTCGATAATCAGGCCTTAGCTGTACTTCCCTTTTAGTTGGAAAAAAAAACATGAATACTCTACTAATCCATATTATCATAATTCTTAATAGTTCAAGTACTTCCTCAAGGACCCCGTCAAGTATGATGTCAAATATCAGGTACTCAAATTCTTTCTCAAGGTGTAGATTTACATTTATAGAAACTAGAGCTGTGATGAAACATTGAAACATTAAAGTTCCCCAAGAAATCAAAAGCCCATGTCGACGCCAGACTGGCAAATTTTGGGACACAATTATTCCACCTTATGTTTGCAATAACATTTCAGGCCAGTGCGCAGCCATTTCTTGTGCTAGGTCTGTTGGTCACTGCTTTAGCAACCAGCCACTGAACCCAACATTGGAGAGAATTAAGCGCACACCTATGAAGCATGCGAGACAAATGCAAGGCCAGAGAAAGCAGGAAGCCAAGTCTTGTCACTCCCCCCCGACAGCAACTGGCTCAATTCAGGTTAAATTTTACCTTGTTTGGTAACAGCAGGTTTTGGATTTCTACCAACATGTTTCAAAGCTTTGATTTAGGATTGTATCACTATCAGTTCTTAGGTTAGGTTTGGTCTCCTATTACACGTCAGTTCCTACCATTGATGTCTTCTTACTCCGGGATGCAATAGGTTCATAATGCATACCTCTTATTCCATACAACCAACCAACCCTGTTTTGCTTGAGACATTTACTCATTTTGGGAATGTTTCATTTTAACCATCCTCAATAAAGATATGCATATCCATATCCCTTATGTTTAGCCATATGTGGCATTTGTAGGCAGATACACTAGAAAAAGACCGACTTTAACTGCTCACTCAAGGCAGAAACATCGATATACAGACCTGAAGTAGGCTATAAAGCCTTGAAATACAATTATTTATTCTAGACACTTTTAGGGAAAGTAGAAACTAAAAAAACAAAAAAAAGAAACTAAAGATGAAAATGGAACATAGAAGTTTAGATTGAAGACACATTGTGAAAGGGTGGTTTTTGTATTTTTTATTTATTCCTGAACTTGGATTCGTCAATCTCAACACCTTCCTCAGCAGCACGTTCTCCTCCAGACATACCTGTGTTGCTTAGCCCTCCTTTACGGCCCATCTCTTGGTATCCTTCGTGTCCCAGCTGCTCCTTC TTTACCGCAGGCAAATATAATAGAGTAAAGGGAGTACCCTCCTCGGAAGTAACTATTTTTAAAATTTTGTGTTTCCTCACATCCTTAGTTATCAACTCCCTCACCACTTCCTTTTTCTCTCCGCCACTATCCGGTGCTTCAATGGCGTTGACACTGAATACACTTCCATCTCTAAGATTGTCCAGCATCCATGCCAATAGAGTTCGATTTCAATCTTCTTTATCGCCAGTTTCTGTTTCTTTTTCTAGAAGGAGGCTCTCGGTTGTTGCTGCTGAAACTGACGCGAATGAAGTTAAATCTAAGGCGTCAGATAAAGCGCCGGCAGGTGGTGGTTCGAGCTTCAACCAGCTTCTTGGAATTAAAGGCGCTGCGCAAGAAACTAATAAATGGAAGATTCGACTTCAATTGACAAAGCCTGTTACATGGCCGCCCTTGGTTTGGGGGGTAGTTTGTGGTGCTGCTGCTTCTGGTAACTTCCATTGGACTATTGAGGATGTGGCAAAATCAATTGCTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTATACGCAGACAATCAATGATTGGTATGATCGAGAGATTGATGCAATTAATGAACCTTATCGTCCAATCCCTTCTGGTGCAATATCTGAGAATGAGGTTATAACTCAAATATGGGTGTTGCTTCTAGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGCAGGACACGACTTTCCTACAGTCTTTTACCTTGCTCTAGGTGGCTCTTTGTTATCATATATATACTCTGCTCCACCTCTAAAGCTAAAACAAAATGGATGGATTGGAAATTTTGCGCTTGGAGCTAGTTATATTAGTTTACCATGGTGGGCAGGTCAAGCTTTATTTGGGACTCTCACTCCTGATATTATCGTTCTCACACTCTTGTACAGCATAGCTGGTTTAGGAATAGCCATAGTAAATGATTTCAAAAGTGTTGAGGGCGATAGAGCTTTAGGACTTCAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGGGCTATTGACATAACTCAATTATCTGTTGCTGGTTATCTGTTGGGAGCCGGCAAGCCGTATTACGCATTAGCACTGCTCGCTCTTATTGGTCCCCAAGTTTTCTTCCAGTTCAAGTACTTCCTCAAGGACCCCGTCAAGTATGATGTCAAATATCAGGCCAGTGCGCAGCCATTTCTTGTGCTAGGTCTGTTGGTCACTGCTTTAGCAACCAGCCACTGA FTAGKYNRVKGVPSSEVTIFKILCFLTSLVINSLTTSFFSPPLSGASMALTLNTLPSLRLSSIHANRVRFQSSLSPVSVSFSRRRLSVVAAETDANEVKSKASDKAPAGGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTIEDVAKSIACMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLAGLLDVWAGHDFPTVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIGPQVFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH Homology
BLAST of Cucsat.G13879 vs. ExPASy Swiss-Prot
Match: Q38833 (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 5.0e-106 Identity = 191/220 (86.82%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy Swiss-Prot
Match: Q5W6H5 (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CHLG PE=2 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.8e-103 Identity = 190/220 (86.36%), Postives = 198/220 (90.00%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy Swiss-Prot
Match: Q9M3W5 (Chlorophyll synthase, chloroplastic OS=Avena sativa OX=4498 GN=CHLG PE=1 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 7.4e-102 Identity = 187/220 (85.00%), Postives = 195/220 (88.64%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy Swiss-Prot
Match: P33326 (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=bchG PE=4 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25 Identity = 73/215 (33.95%), Postives = 112/215 (52.09%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy Swiss-Prot
Match: P26170 (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=bchG PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.4e-21 Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 0
BLAST of Cucsat.G13879 vs. NCBI nr
Match: XP_004148612.1 (chlorophyll synthase, chloroplastic [Cucumis sativus] >KGN54387.1 hypothetical protein Csa_018018 [Cucumis sativus]) HSP 1 Score: 412 bits (1058), Expect = 3.41e-142 Identity = 210/220 (95.45%), Postives = 213/220 (96.82%), Query Frame = 0
BLAST of Cucsat.G13879 vs. NCBI nr
Match: XP_008464210.1 (PREDICTED: chlorophyll synthase, chloroplastic [Cucumis melo]) HSP 1 Score: 409 bits (1052), Expect = 2.78e-141 Identity = 209/220 (95.00%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. NCBI nr
Match: XP_030479806.1 (chlorophyll synthase, chloroplastic [Cannabis sativa]) HSP 1 Score: 407 bits (1046), Expect = 2.12e-140 Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. NCBI nr
Match: KAF4379089.1 (hypothetical protein F8388_022176 [Cannabis sativa] >QKZ93261.1 putative aromatic prenyltransferase [Cannabis sativa]) HSP 1 Score: 407 bits (1046), Expect = 2.12e-140 Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. NCBI nr
Match: XP_038883867.1 (chlorophyll synthase, chloroplastic [Benincasa hispida]) HSP 1 Score: 407 bits (1045), Expect = 3.23e-140 Identity = 207/220 (94.09%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy TrEMBL
Match: A0A0A0L1C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G311220 PE=4 SV=1) HSP 1 Score: 412 bits (1058), Expect = 1.65e-142 Identity = 210/220 (95.45%), Postives = 213/220 (96.82%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy TrEMBL
Match: A0A1S3CLE7 (chlorophyll synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502144 PE=4 SV=1) HSP 1 Score: 409 bits (1052), Expect = 1.35e-141 Identity = 209/220 (95.00%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy TrEMBL
Match: A0A7D5DNH8 (Putative aromatic prenyltransferase OS=Cannabis sativa OX=3483 GN=PT9 PE=2 SV=1) HSP 1 Score: 407 bits (1046), Expect = 1.03e-140 Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy TrEMBL
Match: A0A803QFK2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 407 bits (1046), Expect = 1.03e-140 Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Cucsat.G13879 vs. ExPASy TrEMBL
Match: A0A6J1HPP2 (chlorophyll synthase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466211 PE=4 SV=1) HSP 1 Score: 405 bits (1042), Expect = 4.47e-140 Identity = 204/220 (92.73%), Postives = 211/220 (95.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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