Cucsat.G13680 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13680
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DNA topoisomerase 6 subunit A
Location	ctg184: 827812 .. 836277 (-)
RNA-Seq Expression	Cucsat.G13680
Synteny	Cucsat.G13680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCACGTTTGGCTTCAGCTCCAAAATTCCTTCATCGACGGCACCCGCCGCCCGCTCATTTTTGGTGGAACGTATGGCGGGGACTCTATCGGCTTCACTGACTTCCAATTCTGCACTTCCTCAAAGGAAATCTAGCCAATCTTCGCGTGTCTTCTACATTCCTCGTTGTCGGAACCTTCTCTTTAATTACAGTTTTTCGCACTGCAGCAATATTGTGAGACTCTCACTACGGCGAACTGGCGTCGTTGTCTCGGCAATATCTGGTTCTCCCGGTGAGTTAAATTGCTCTTCGCGTTACGGTTTTTCCCTCGTGATTTCGGGATGTGGTTTATGAAACGTGGTTTACAGGAATTGGATCGTATGTGGAGAGTGGGAACACTGCAGATTTACTGGAATCGGTGAAGGTGTTTGACTTGAACGGGAATGGAATTCCGATTTCCGATCTCTGGAAAGATAGGAAAGCTGTTGTTGCATTTGCGCGTCATTTTGGGTACTTTGTTTGAATTTTATATTATAGCTAATTGACAACAGTTTTTCAATTTCTATTTTTCGGTTTATGAGTAGATGTAAGTTGTTACAGGTGTGTCTTTTGCCGAAAACGTGCTGATTATCTTGCATCTAAGAAGGTAACGAAGCTGAGTTATCAATACAATAGTTGCTTAAATTGAATATACTTGCTTCAACTTGATTCAGAGGCAGTTGACATTACTTATTCATATTCATTTGAAGTTGGAGGTTCAAATTCTCAATTCTCACATTGAGGATCGCAATGTTTATAGGATATATGTTACTATTCACAATTAATTTTGAGCTGGAACTTCATGTTATTTAATATGGTATGAGAAACTATTAAGTCTAAACGAGCATACGGTCCAATAATATAAATTAGTATCCAATCCAAGAATGGTAAATCTAAAGAAACACCATTTTGAAGTACATGTTTGAGGATCTCGCATAATATAAATTAAGATTTTATAAAACCACGAGCTACTCCTCCCATTGTCGGTTGGTTTTATGATGGTATCTCATGTGTTGATACTAAAAAAATTTGAATACATATGTTTTGGAGATATTGTTCACTTCAAGTAATTTTCCTTCTTAATCTTTGATCAAATTAATTAGCTTGCTCCATTTATAATTTTGTACTGTTTATGGTGAAAATAGAATTAGTATCTAACCATTAATTTGATTATACATATACAAATATACACACACAACATATATATAAAAGATATTTTCAAGAATTAAGTCACACAGTTCATGATATGGTAGCAGGATTTATTGGATGCATCCGGTGTGGCTCTTGTGCTGATTGGACCTGGTAGCATTGATCAGGTATGAAACTAGTCTCAATGAATAATTTGCAGAATGCTGGGGATTTTATTAGGTACTGGGTTTTGGATTACGACACACTTTATTTGTTAAGCCACATTATTTCCATTTTATCTTTTTGAGTTGGACCGTATGGTTATGGATAATTAGTAGATTATCACTGCATCATTATCTCCCATTAAAATCTGTCAGTTCACTTTATTGATCCTTATTTAACTTAATGTTAACAATCTGATGTAGGCAAAAGCATTCAGTGAGCAAACAAAATTTCAGGGAGGTAAGTTTCTGCCAATGTAGAAAAATTTTGGAACCGAGTTTTTGTGGCTTCTTTATGTGTACATTATATAATAGAGATCAATCAGGTGTTGATGAAGAAATGTGCAGGATGTAATGGAAGTTATCTAGTTAGGCTACTGCTAGTTAGATATTTTATTCTCAATAAATATTCCTTTGAACCATATGTTGATCTGATCAGAGAAGTTTAACAGTTGTCTTTTTTATCTTTAAGTATTTCTGTTGAGGACCTGAGAATGGATAAAATTAAAAACAATATTAGGTAAGAACGATGGCAGATCTAGATAAGTTTTGGTAGTAAGATTGGATTATTGACTTTCTTCTGAATCGATGTTAACCAGTTATATATGTGTTTAGAATTGTAATCTAGAATAAGCAGGGACGGTTTTTTGTTTTGACCGACTGATGAACGTGTACTATCTTTTACAGAAGTTTATGCTGATCCTGCTCATTCATCATACGAGGCTCTAAATTTTGTCTCTGGGTTTACAACCACATTTACTCCCAAAGTAGGTTAGGAGTTAAGTATAACAGTAAACTAATATTCACCGGCAATAACAGATTGTGGTGCTTACCTTGGTTGCTTGTATGACTTTATACTTAGGCGGGTCTCAAGATTATTGAGCTATATATGGAAGGCTATCGGCAAGATTGGAATCTTTCTTTCCAAAAGGACACTGTGACTAGAGGGGGCTGGTAATTGAAAATTCTAATTGTTTTATTTCTCTCTATCTCTCCATTGTTTTGAAAGTTATAAAACCGTGTTAAACAATGAGAAGTCGGAAAAGAAAATAGAAGAAGAAGAATGATGATTCAATGAACTCACCTCCTCACCGTCAAGGGATTAGGCAAATACATAACTCTTTCCTTTATGTGCCACTTTAAGAATGTTAGGAAAATTCAAGAATAGCCAACGGCACAAAAACACTAAAAGATAAAAATATATATTGCATTGAAGAAACTTCAAAATCATAGCTTTTCGAGAGGACTACACTCTCCCAAATTTGACCATGAAAATTACTACTAAAATGATCCACGTCTCTAATGACCCTAACATATTATATTTATAACCAAAGTACCCCTAGCCAATGATCCTCCTGCCCTTGCTATTAACCTACTTAATAATCTTAATATATCTCTAAGTAGGCTCTCACATGTTCATTATAAAGAGTAAAAATGGCAATTCAGATTTATGACTACACCCTTGAACTGCGATTAGATTCCATGAGCTGACATGAACAGGCAGTGAGATCCCCTAATCTTGAGATATTCTACCTTATCACTTAAGCAAACTTACATTTGAGTATGTCCTCGATTCATTTGATTAAAGTGGAGGGCTCATGTTGAATATGATATATCATAATCTCTGATTCACTTTGGATAGTCTTCTCACTTTCTGTGGGAAACTCATCATTGTATGTCTTAAGAAATATAGTTCAGTACCCAAAAGACTTGGTTATTAATCAAAAGAATTTAGATTCATTGATCAGTCGTTTCTTTTTCACATCTCTCTCATTATGCTTAATGAGAAAATATATTCGTGCCATTCTCAGGCAGCAAGGTGGCATCATAGTTGCAGGTCCCGGTAAAAATAACATCTCTTACATTCACAAGGTATGACACTTTTCCTATATCTGTTCTTATTTGTTATCTTGGAATATCTTGAATCTATTATTTTTATGCTAAGATTTAGAGAATTGGATTATATATCATCTCTCTAGTTCCTGAGGCACCCATGCAATCAGTACTTTGGCACTTCCTCTCTAATAATACAACTACTCTCCCTTTGCCCATGAACATTGTTATATATAATACTGTTAGTGAACCATATAAACATTTGTGTCGTACTTCTACTATTTACATTTTCTGTTTATCTCTGATTGTCAAATTCATAACATTTTTTGCTATGATAAAATCCAAATCAATGATTTTTATCGATTTTATTATCCTGGTAAAACAATATCCAAAAGATTTCCCAACACAGGAAAAATAATACCAATACCAACAATAAAACTCCGACCCCAGGCCTTCAGGGTTGAATCTAAGATAAACTTCGTAACTTTCTGAAAACCCCTTTTAAATCTTTTGGTAGATGTAAAGCTTCACATAGTCAACTTTTGTTATTATTACTATTAATATTATTATTTTTTAAACTTTAGGATAAAGAAGCTGGGGATGATCCAGATATCCAAGAAATTCTCAAGGCATGTTGCTCATAAAGTTGAGATAGATTCTCACACTGCCAAGATCCAGTGCTACCTTAAACGCTGGCTTGCAATAAGGTAGTAATTATGGAACCAAAACACCTTGAAATTAATACCCCACTTGAAAATGAAAACTGATATGAAGGAAAAAGTAGAGTATATATAATTTTTATTAAGGGAGCAGTTAGTTTTATAATCTGAAGTATACTATGAATACTTGTAGATATGGATGATAAAGTTAGAGAATCAGGTGAATGAAATTCATTTTCTATGTATTTTCAGGCCAGAAAGTGTTCGAATAATTATTGAATCATGCAAAATGGTATCAGAAGTATATATTGAGAAAAACTCAGAAAATATTAGAACTAATGGAGTGACCTTTTCTTTCTAGACAAATTATGGAGTTGGAAAATTGATTAAAAATTTCCCAAATTATACTAAAAAATCTCTTTAATCTTCTTCCTTTTTTTAACCCTACTATTTCTTCTTACTCTTTAATGATCCTTTAGTTAGTCAAATTGAAAAACTCAGCTCCATAATAAACAAAATGGATGTGTTGATGTGTTGTCAACGTGCAGAAATTTTGGAATTTGACAAATTAAAGGGACAGTGGGTGTATATACTAGATGTTGATTTTCCTCACGCTCGAACCCTCTATCTGTTGCTCGTGCTCTTCCTCACTCTCATTCATTGACTCACTCATTCGTTGCTTTGAAAAAAGCATAGAGAAGTGATTTATAACATCGAAAAAATGTTACTTTATTTGTTTTTGGAATATGAGGGAATGACCTTTTAAACATAAAATGTATCTATCTTTCCAACAAAAATTTTGGACCAAACCAATTAGAATTATCATAAATATTTAAAATATAATAAAATCTATATTTAAAATATAATAAATTTAGATTTTATCGATAATAAACATTCGGGAGGATAGTTACCGTTAATGTATGGAAGTTTGTTATGTTAAATAATTTAGTTAATTTTGGTATATTTGAAAATGATTATTATTTTATTTTTTTGCTCTATCAACACTTCAATTCACTTGAAGCCCTAAATAGTAGATAGAGCAGATAGAGTCATTTCCCGCTTCTTCCCGTCTCAATCGCTCTTATCTCTCCCTCCATTTCAATGGCCGACAAGAGAAAACGCCGGCGATCTGAACTGAATTCCGAAGACGAAGCTCAACTTCCCTTCAAGAACAAACTCAAGCCTGATTCCTTCATTCTTCAAATTCTCAAAGAGCTCAGTGACGCCTCCACTGCCTCATCTTCCTCTTCATCCAAAACCCTTGACGACCTCGGCCTCTCCTCCTCCTGCCGCGAGGTGACCGATCTTTCGCTTTCGTCCGTGCAAGCCACAATTGAATCTGTGATCCTTAAAATTGCTCGTTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGGGGCCAACCAGTTGTACGTTCCAGAGCTCGATCGAATCGTTTTGAAAGATAAAACTGCCCTCCGTCCCTACGCCAATATTTCTACTGTCCGAAAATCCACCATTACTACTCGCATTCTTCAGCTGGTCCACCAGCTCTGCATAAAAAACATCCACGTAACCAAGCGAGATCTGTTCTACACGGATGTGAAGCTCTTCCAGGATCAGACTCAGTCAGATTCTGTGCTTGATGATGTTTCTTGCATTCTCGGTTGTACAAGGTCGAGTCTCAATGTGATTGCTGCAGAGAAAGGGGTGGTTGTGGGAAGACTAATTTTTAGTGACAATGGAGATATGATAGATTGTACTAAAATGGGTATGGGAGGAAAAGCGATTCCACCAAATATTGATAGAGTTGGAGATATGCAGAGTGATGCATTGTTTATACTCTTAGTTGAGAAAGATGCTGCTTATATTAGGTTAGCTGAGGATAGATTCTACAATCGTTTTCCATGTATAATTGTGACGGCTAAGGGACAGCCAGATGTGGCCACAAGATTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTCCCAGTGCTTGCCCTTGTGGACAGTGATCCATATGGGTTGAAGATTCTATCTGTCTATGGGTGTGGATCAAAGAATATGTCTTATGACAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTGGGGATTAGGCCGAGCGATTTGGATAAATATAAGATACCTGAGCAGTGCAGGTTACCAATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAAGATTTTGTCAAGAAGAATCCTGGTTGGGTTGAAGAGCTCAGTTTAATGGTGAAAACAAAGCAAAAGGCTGAAATTCAGGCATTGAGTTCATTTGGTTTTCAGTATTTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGACCTAAGAGTTTGTTAGTATGTATTGTAATCAATTGTTGAATTTCTGTTGCAACATTATGAAAGTTGAGAAATGATCAGGATAATGTTATTTCTGACCAAATCATATCCAGCTTTCAAAGGTATAGAAATACATGCTTTCAGGAAGGATTAGAATACATACTTTTGCTTCCAATTTCATGTTTGTTGCTCTTTTATTTTAGTTATTTGAGTGCAGTGGCATAATATTCAAGAAGAATTGAAATCACAGATCCTGATATCAATGAGGTAAGTTTATCTTAGAGGTTAGTTAAATGCAGTTTTTAAAGCTGATCTCATTGTATATCTGCATGTTCTTAGGGTTGGTCTTCTATTTAAATGGAGACTGAACAATTCTGTCCTAAGTAGAGATATGTAGTTGAAGGAATATAAACTAGTGTTTATTTTTGGTTTTCTTTCTTACTCTTTCGCGCTGACCCTTCTATTGGTAAGGTTTTGTATCAAGTTGTTTTATTCTGCATATGAAAAGTTTGGCTTCTCATTTAAAAATAAAGCTGATCAAGTAATGCAACACTAGTTTTCTTTCGAATTTTGTATCAAGTCTCTTCAATCCGCATGTTATCGCGGTTGTAACCTTTTCAAATAGGAACTAATAACCAGAACAAGAGTAGGTGTTTCTGTTGAGTTCTAACATGTGGGCTGAGACTTAGAATCTTTTATTAGTTGAGGGTGTGATGCCTTACCCAGTAGAACACTTTTGTGATTATATGCTATTGAATGTCATTTTTGTAGATTCTGCCTCTTTCTCGTAGGCTTTTCTTTGCTTTCCTTTTTTTCTTTTTCACCCTTATGCGTTTTTCATTCTTTTCCCAATAAAAGTTTGGTTATTCATGAAAAGAAAACATAGTAGTTGAACAAAAGGGGTGTATACCTTTTTATTAATGAATGACGGTAAAGATTTTCATTTGGAGTTTACAAGAGAGACCATGGAGTAAGATTACTTATACTGCTATACAGGAAAAGAAAAGTAATTACAAGATATTGAACATCATCGTTATATCTTAAACAAAAAATCATTGTGGGAGTTTTGCATTTTCTACTATTACCTATTTCTTTGCAGCCAATCTTGGAGTGATTTCTTGGTGACTTTTAGCCTCTGTACATCTGCTGGTTTCCTAGTGAAGTACTTATTCCTTCCCATAGTTCCTTTCAGTTTTGTTGTATGAGAAATTTTTGAGCTTTCTGAATTTGGTACTTTATCAAGAGCAATTGTAGGTCCTGTAGGAAGAACCTCAAGCCCTAATTCATCTTGCAAGAGTCTGGTTATTGCATCTCTCACCTCGAAGTTCTGTGGAACTAAATCTGTTTCAACTTTATTCACTTCTAAGATGATGAATATATCATCTTTTACTGATTCTCCTGCAGCCAAGATAGATAAAAAAATGTAAGTAACTATTCCTTAAGAGTAATAGATGCAGCTGAGCTTTCCTCAAGTACTATTCCCTTGTATTCATAAAAACAAACCCTGGAATGGAATGTGGCAAATAGATATTGTTCAAATATGGTAGTATGTATATTTTTCTAAGGAATATGTCAATACCTAATGCATAATTTTCCTTGATCATTCGTAAAACTGCAAGAACAACTATTCGAGCTTCAACCTGATGAAATGCAGAAGATGATTAGTCTCATGCAGGTGGGTTCTCAAATTACAAATATCAAAGGTTACTTTGCGAACTTAAGGTTGAGTTGTTTGTGCTGTTTACACAGACCTTTGTTAGCTCCTGAAGATCAATTGTAAGGCTTTCGGCAAAGCTCTTCTGCAGATGGTCGGCAACTTTTTCAAGAATCAAACATCGTGGTTTCCCAATGTCAATTTTGTTGCAGGGAGTTATCTCAACTGGCTGCTGATTGTTTTTCTGTATAACTCCTTCACACCACTCCGCAATCAACTCTTTGAGATAATGATCATTGGATTTGAACCTGAAAATTTTCAGTTAGAATAATTTCCATTACATCTAAAGAAAATAAGGGAGTCTAGGCATTGCAAAAAGGCTTGCCAAGCTAGAAGAATGATGCCCCAAAACAAACCTTTATTTTGAAAGGAAATAATAATCCTTACTATTTCAGTATTCTGAGGGCATGAAATATTGTTTTATTTTACTTCATTGTGGGGAATTTTAATACCAATCAACATGAACAAGAGACTAAAAATCAGCAACGGTAACTGGATTTCAACATGGTTCCACTACAGAGAAGGAGAAT

Coding sequence (CDS)

ATGGCCGACAAGAGAAAACGCCGGCGATCTGAACTGAATTCCGAAGACGAAGCTCAACTTCCCTTCAAGAACAAACTCAAGCCTGATTCCTTCATTCTTCAAATTCTCAAAGAGCTCAGTGACGCCTCCACTGCCTCATCTTCCTCTTCATCCAAAACCCTTGACGACCTCGGCCTCTCCTCCTCCTGCCGCGAGGTGACCGATCTTTCGCTTTCGTCCGTGCAAGCCACAATTGAATCTGTGATCCTTAAAATTGCTCGTTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGGGGCCAACCAGTTGTACGTTCCAGAGCTCGATCGAATCGTTTTGAAAGATAAAACTGCCCTCCGTCCCTACGCCAATATTTCTACTGTCCGAAAATCCACCATTACTACTCGCATTCTTCAGCTGGTCCACCAGCTCTGCATAAAAAACATCCACGTAACCAAGCGAGATCTGTTCTACACGGATGTGAAGCTCTTCCAGGATCAGACTCAGTCAGATTCTGTGCTTGATGATGTTTCTTGCATTCTCGGTTGTACAAGGTCGAGTCTCAATGTGATTGCTGCAGAGAAAGGGGTGGTTGTGGGAAGACTAATTTTTAGTGACAATGGAGATATGATAGATTGTACTAAAATGGGTATGGGAGGAAAAGCGATTCCACCAAATATTGATAGAGTTGGAGATATGCAGAGTGATGCATTGTTTATACTCTTAGTTGAGAAAGATGCTGCTTATATTAGGTTAGCTGAGGATAGATTCTACAATCGTTTTCCATGTATAATTGTGACGGCTAAGGGACAGCCAGATGTGGCCACAAGATTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTCCCAGTGCTTGCCCTTGTGGACAGTGATCCATATGGGTTGAAGATTCTATCTGTCTATGGGTGTGGATCAAAGAATATGTCTTATGACAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTGGGGATTAGGCCGAGCGATTTGGATAAATATAAGATACCTGAGCAGTGCAGGTTACCAATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAAGATTTTGTCAAGAAGAATCCTGGTTGGGTTGAAGAGCTCAGTTTAATGGTGAAAACAAAGCAAAAGGCTGAAATTCAGGCATTGAGTTCATTTGGTTTTCAGTATTTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGA

Protein sequence

MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL

Homology

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BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot
Match: Q9LZ03 (DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 6.7e-200
Identity = 360/430 (83.72%), Postives = 395/430 (91.86%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEA-QLPFKNKLKPDSFILQILKELSDAS---------TASSSSS 60
           MADK+KR+RS+   +DEA +LPFK+ L+ D  I ++LK    +S          +SSSS 
Sbjct: 1   MADKKKRKRSK---DDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSSK 60

Query: 61  SKTLDDLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYV 120
             TL DL LSSSCREV DLSLSSVQ  IE+VI++IARSIL+G+GF+F VPSR+ +NQLYV
Sbjct: 61  PLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYV 120

Query: 121 PELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQ 180
           PELDRIVLKDK+ LRP+A++S+VRK+TITTRIL L+HQLC++NIHVTKRDLFYTDVKLFQ
Sbjct: 121 PELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQ 180

Query: 181 DQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240
           DQTQSD+VLDDVSC+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP
Sbjct: 181 DQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240

Query: 241 NIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300
           NIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM
Sbjct: 241 NIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300

Query: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360
           ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ
Sbjct: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360

Query: 361 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYL 420
           CRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYL
Sbjct: 361 CRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot
Match: A2XFC1 (DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 PE=1 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 290/409 (70.90%), Postives = 350/409 (85.57%), Query Frame = 0


Query: 23  KNKLKPDSFILQILKELSDA--------STASSSSSSKTL---DDLGLSSSCREVTDLSL 82
           ++KL+PD+ IL  L+ L+ A        S++SSSS+SK L   DD   ++S   V D   
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDD--PAASYIVVADQDS 95

Query: 83  SSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANIS 142
           +SV + I  ++L  ARSILSG GF+F VPSR+ +NQ+Y+P+LDRIVL  + + RP+AN++
Sbjct: 96  ASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVA 155

Query: 143 TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRS 202
           T RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRS
Sbjct: 156 TARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRS 215

Query: 203 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKD 262
           SL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKD
Sbjct: 216 SLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKD 275

Query: 263 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 322
           AA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILS
Sbjct: 276 AAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILS 335

Query: 323 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 382
           VY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDF
Sbjct: 336 VYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDF 395

Query: 383 VKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           VK+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 VKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

[Close]

BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot
Match: Q0DSV9 (Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 PE=2 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 290/409 (70.90%), Postives = 350/409 (85.57%), Query Frame = 0


Query: 23  KNKLKPDSFILQILKELSDA--------STASSSSSSKTL---DDLGLSSSCREVTDLSL 82
           ++KL+PD+ IL  L+ L+ A        S++SSSS+SK L   DD   ++S   V D   
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDD--PAASYIVVADQDS 95

Query: 83  SSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANIS 142
           +SV + I  ++L  ARSILSG GF+F VPSR+ +NQ+Y+P+LDRIVL  + + RP+AN++
Sbjct: 96  ASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVA 155

Query: 143 TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRS 202
           T RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRS
Sbjct: 156 TARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRS 215

Query: 203 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKD 262
           SL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKD
Sbjct: 216 SLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKD 275

Query: 263 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 322
           AA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILS
Sbjct: 276 AAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILS 335

Query: 323 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 382
           VY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDF
Sbjct: 336 VYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDF 395

Query: 383 VKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           VK+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 VKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

[Close]

BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot
Match: Q9Y5K1 (Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.8e-65
Identity = 130/355 (36.62%), Postives = 219/355 (61.69%), Query Frame = 0


Query: 70  SLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYAN 129
           S S V A+IE++I  I  S+      AF + +RS    +   +   + +      R   +
Sbjct: 43  SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102

Query: 130 IS--TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILG 189
            S  + +K ++  +IL ++++L   N + TKRD++YTD +LF +QT  D++++D+SC+L 
Sbjct: 103 DSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162

Query: 190 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFIL 249
            +R SL++++  KG++ G L +  ++G  ++CT  G    A+P NI  + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 222

Query: 250 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 309
           +VEKDA + RL +D F N+  PCI++T KG PD+ TRL ++K+     +PV  LVD+DP+
Sbjct: 223 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 282

Query: 310 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 369
           G++I+ +Y  GS +MS+++ +LT P I+WLG+ PSDL +  +P+   +P+T++D      
Sbjct: 283 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 342

Query: 370 LLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           +L   +V   P W +E+ +M  +K KAEIQAL+     YLS VYLP KL+   W+
Sbjct: 343 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396

[Close]

BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot
Match: Q9WTK8 (Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-64
Identity = 135/363 (37.19%), Postives = 212/363 (58.40%), Query Frame = 0


Query: 70  SLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYAN 129
           S S V   IE++I  I +S+      AF + +RS          + I+  D   LR    
Sbjct: 43  SSSEVLTAIENIIQDIIKSLARNEVPAFTIDNRS--------SWENIMFDDSVGLRMIPQ 102

Query: 130 IST----------VRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVL 189
            +T          V+K  +  ++L ++++L   + + TKRD++YTD +LF +Q   DS +
Sbjct: 103 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAI 162

Query: 190 DDVSCILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDM 249
           DD+SC+L   R SL+V++  KG++ G L +  ++G  + CT       A+P NI  +  +
Sbjct: 163 DDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHL 222

Query: 250 QSDALFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVL 309
            +DA F+L+VEKDA + RL +D F +R  PCI+VT KG PD+ TRL ++K+     +PV 
Sbjct: 223 ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVF 282

Query: 310 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 369
            LVD+DPYG++I+ +Y  GS +MS+++ NLT P I+WLG+ PSD+ +  IP+   +P+T+
Sbjct: 283 TLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTK 342

Query: 370 QDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 421
            D      +L+  ++   P W +EL +M  +K KAEIQAL+     YLS VYLP KL+  
Sbjct: 343 HDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFG 396

[Close]

BLAST of Cucsat.G13680 vs. NCBI nr
Match: XP_004142105.1 (DNA topoisomerase 6 subunit A [Cucumis sativus] >KGN54191.1 hypothetical protein Csa_018095 [Cucumis sativus])

HSP 1 Score: 813 bits (2100), Expect = 1.28e-296
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. NCBI nr
Match: XP_008447225.1 (PREDICTED: DNA topoisomerase 6 subunit A [Cucumis melo] >KAA0047308.1 DNA topoisomerase 6 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 800 bits (2066), Expect = 1.94e-291
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. NCBI nr
Match: XP_038881252.1 (DNA topoisomerase 6 subunit A [Benincasa hispida])

HSP 1 Score: 793 bits (2048), Expect = 1.07e-288
Identity = 409/420 (97.38%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSE N + EAQLPFK  LKPDSFILQILKE SD+STASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSEPNPDGEAQLPFKKSLKPDSFILQILKEFSDSSTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. NCBI nr
Match: XP_022143741.1 (DNA topoisomerase 6 subunit A [Momordica charantia])

HSP 1 Score: 789 bits (2037), Expect = 5.10e-287
Identity = 404/420 (96.19%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN +DEAQLPFKN+LKPDS ILQI+KE  D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. NCBI nr
Match: XP_022950775.1 (DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033876.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 786 bits (2030), Expect = 5.95e-286
Identity = 405/420 (96.43%), Postives = 409/420 (97.38%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN + EAQLPFKN LK DS ILQILKE SD STA SSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIE +ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL
Match: A0A0A0L216 (DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 813 bits (2100), Expect = 6.18e-297
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL
Match: A0A5A7TWM5 (DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 800 bits (2066), Expect = 9.40e-292
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL
Match: A0A1S3BGY2 (DNA topoisomerase 6 subunit A OS=Cucumis melo OX=3656 GN=LOC103489716 PE=3 SV=1)

HSP 1 Score: 800 bits (2066), Expect = 9.40e-292
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL
Match: A0A6J1CR74 (DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=3 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 2.47e-287
Identity = 404/420 (96.19%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN +DEAQLPFKN+LKPDS ILQI+KE  D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL
Match: A0A6J1GGP2 (DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3 SV=1)

HSP 1 Score: 786 bits (2030), Expect = 2.88e-286
Identity = 405/420 (96.43%), Postives = 409/420 (97.38%), Query Frame = 0


Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN + EAQLPFKN LK DS ILQILKE SD STA SSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIE +ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

The following BLAST results are available for this feature:

BLAST of Cucsat.G13680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ03	6.7e-200	83.72	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1	[more]
A2XFC1	7.2e-162	70.90	DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 ...	[more]
Q0DSV9	7.2e-162	70.90	Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 P...	[more]
Q9Y5K1	2.8e-65	36.62	Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1	[more]
Q9WTK8	1.8e-64	37.19	Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2	[more]

BLAST of Cucsat.G13680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142105.1	1.28e-296	100.00	DNA topoisomerase 6 subunit A [Cucumis sativus] >KGN54191.1 hypothetical protein...	[more]
XP_008447225.1	1.94e-291	98.33	PREDICTED: DNA topoisomerase 6 subunit A [Cucumis melo] >KAA0047308.1 DNA topois...	[more]
XP_038881252.1	1.07e-288	97.38	DNA topoisomerase 6 subunit A [Benincasa hispida]	[more]
XP_022143741.1	5.10e-287	96.19	DNA topoisomerase 6 subunit A [Momordica charantia]	[more]
XP_022950775.1	5.95e-286	96.43	DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomera...	[more]

BLAST of Cucsat.G13680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L216	6.18e-297	100.00	DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1	[more]
A0A5A7TWM5	9.40e-292	98.33	DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE...	[more]
A0A1S3BGY2	9.40e-292	98.33	DNA topoisomerase 6 subunit A OS=Cucumis melo OX=3656 GN=LOC103489716 PE=3 SV=1	[more]
A0A6J1CR74	2.47e-287	96.19	DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=...	[more]
A0A6J1GGP2	2.88e-286	96.43	DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004085	DNA topoisomerase VI, subunit A	PRINTS	PR01552	TPISMRASE6A	coord: 391..414 score: 42.19 coord: 166..183 score: 32.64 coord: 100..120 score: 30.95 coord: 275..295 score: 47.62 coord: 219..237 score: 34.87
IPR004085	DNA topoisomerase VI, subunit A	HAMAP	MF_00132	Top6A	coord: 68..420 score: 36.319901
IPR002815	Spo11/DNA topoisomerase VI subunit A	PRINTS	PR01550	TOP6AFAMILY	coord: 269..290 score: 49.43 coord: 158..169 score: 53.65 coord: 172..189 score: 39.24 coord: 301..317 score: 55.15 coord: 190..205 score: 44.92 coord: 245..262 score: 51.04
IPR002815	Spo11/DNA topoisomerase VI subunit A	PANTHER	PTHR10848	MEIOTIC RECOMBINATION PROTEIN SPO11	coord: 46..420
None	No IPR available	GENE3D	3.40.1360.10		coord: 199..420 e-value: 4.3E-78 score: 263.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10848:SF4	DNA TOPOISOMERASE 6 SUBUNIT A	coord: 46..420
IPR013049	Spo11/DNA topoisomerase VI, subunit A, N-terminal	PFAM	PF04406	TP6A_N	coord: 134..195 e-value: 2.2E-20 score: 72.4
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 60..198 e-value: 6.9E-39 score: 135.1
IPR034136	Topoisomerase 6 subunit A/Spo11, TOPRIM domain	CDD	cd00223	TOPRIM_TopoIIB_SPO	coord: 244..404 e-value: 1.93884E-72 score: 222.515
IPR036078	Spo11/DNA topoisomerase VI subunit A superfamily	SUPERFAMILY	56726	DNA topoisomerase IV, alpha subunit	coord: 134..420

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13680.T8	Cucsat.G13680.T8	mRNA
Cucsat.G13680.T2	Cucsat.G13680.T2	mRNA
Cucsat.G13680.T3	Cucsat.G13680.T3	mRNA
Cucsat.G13680.T4	Cucsat.G13680.T4	mRNA
Cucsat.G13680.T5	Cucsat.G13680.T5	mRNA
Cucsat.G13680.T6	Cucsat.G13680.T6	mRNA
Cucsat.G13680.T7	Cucsat.G13680.T7	mRNA
Cucsat.G13680.T19	Cucsat.G13680.T19	mRNA
Cucsat.G13680.T16	Cucsat.G13680.T16	mRNA
Cucsat.G13680.T1	Cucsat.G13680.T1	mRNA
Cucsat.G13680.T12	Cucsat.G13680.T12	mRNA
Cucsat.G13680.T14	Cucsat.G13680.T14	mRNA
Cucsat.G13680.T9	Cucsat.G13680.T9	mRNA
Cucsat.G13680.T13	Cucsat.G13680.T13	mRNA
Cucsat.G13680.T10	Cucsat.G13680.T10	mRNA
Cucsat.G13680.T11	Cucsat.G13680.T11	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0000706	meiotic DNA double-strand break processing
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0006265	DNA topological change
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0009330	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
cellular_component	GO:0000228	nuclear chromosome
cellular_component	GO:0005694	chromosome
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016776	phosphotransferase activity, phosphate group as acceptor
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0019205	nucleobase-containing compound kinase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0003824	catalytic activity