Cucsat.G13680.T6 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13680.T6
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionDNA topoisomerase 6 subunit A
Locationctg184: 827812 .. 832421 (-)
RNA-Seq ExpressionCucsat.G13680.T6
SyntenyCucsat.G13680.T6
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTCTCACACTGCCAAGATCCAGTGCTACCTTAAACGCTGGCTTGCAATAAGGTAGTAATTATGGAACCAAAACACCTTGAAATTAATACCCCACTTGAAAATGAAAACTGATATGAAGGAAAAAGTAGAGTATATATAATTTTTATTAAGGGAGCAGTTAGTTTTATAATCTGAAGTATACTATGAATACTTGTAGATATGGATGATAAAGTTAGAGAATCAGGTGAATGAAATTCATTTTCTATGTATTTTCAGGCCAGAAAGTGTTCGAATAATTATTGAATCATGCAAAATGGTATCAGAAGTATATATTGAGAAAAACTCAGAAAATATTAGAACTAATGGAGTGACCTTTTCTTTCTAGACAAATTATGGAGTTGGAAAATTGATTAAAAATTTCCCAAATTATACTAAAAAATCTCTTTAATCTTCTTCCTTTTTTTAACCCTACTATTTCTTCTTACTCTTTAATGATCCTTTAGTTAGTCAAATTGAAAAACTCAGCTCCATAATAAACAAAATGGATGTGTTGATGTGTTGTCAACGTGCAGAAATTTTGGAATTTGACAAATTAAAGGGACAGTGGGTGTATATACTAGATGTTGATTTTCCTCACGCTCGAACCCTCTATCTGTTGCTCGTGCTCTTCCTCACTCTCATTCATTGACTCACTCATTCGTTGCTTTGAAAAAAGCATAGAGAAGTGATTTATAACATCGAAAAAATGTTACTTTATTTGTTTTTGGAATATGAGGGAATGACCTTTTAAACATAAAATGTATCTATCTTTCCAACAAAAATTTTGGACCAAACCAATTAGAATTATCATAAATATTTAAAATATAATAAAATCTATATTTAAAATATAATAAATTTAGATTTTATCGATAATAAACATTCGGGAGGATAGTTACCGTTAATGTATGGAAGTTTGTTATGTTAAATAATTTAGTTAATTTTGGTATATTTGAAAATGATTATTATTTTATTTTTTTGCTCTATCAACACTTCAATTCACTTGAAGCCCTAAATAGTAGATAGAGCAGATAGAGTCATTTCCCGCTTCTTCCCGTCTCAATCGCTCTTATCTCTCCCTCCATTTCAATGGCCGACAAGAGAAAACGCCGGCGATCTGAACTGAATTCCGAAGACGAAGCTCAACTTCCCTTCAAGAACAAACTCAAGCCTGATTCCTTCATTCTTCAAATTCTCAAAGAGCTCAGTGACGCCTCCACTGCCTCATCTTCCTCTTCATCCAAAACCCTTGACGACCTCGGCCTCTCCTCCTCCTGCCGCGAGGTGACCGATCTTTCGCTTTCGTCCGTGCAAGCCACAATTGAATCTGTGATCCTTAAAATTGCTCGTTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGGGGCCAACCAGTTGTACGTTCCAGAGCTCGATCGAATCGTTTTGAAAGATAAAACTGCCCTCCGTCCCTACGCCAATATTTCTACTGTCCGAAAATCCACCATTACTACTCGCATTCTTCAGCTGGTCCACCAGCTCTGCATAAAAAACATCCACGTAACCAAGCGAGATCTGTTCTACACGGATGTGAAGCTCTTCCAGGATCAGACTCAGTCAGATTCTGTGCTTGATGATGTTTCTTGCATTCTCGGTTGTACAAGGTCGAGTCTCAATGTGATTGCTGCAGAGAAAGGGGTGGTTGTGGGAAGACTAATTTTTAGTGACAATGGAGATATGATAGATTGTACTAAAATGGGTATGGGAGGAAAAGCGATTCCACCAAATATTGATAGAGTTGGAGATATGCAGAGTGATGCATTGTTTATACTCTTAGTTGAGAAAGATGCTGCTTATATTAGGTTAGCTGAGGATAGATTCTACAATCGTTTTCCATGTATAATTGTGACGGCTAAGGGACAGCCAGATGTGGCCACAAGATTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTCCCAGTGCTTGCCCTTGTGGACAGTGATCCATATGGGTTGAAGATTCTATCTGTCTATGGGTGTGGATCAAAGAATATGTCTTATGACAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTGGGGATTAGGCCGAGCGATTTGGATAAATATAAGATACCTGAGCAGTGCAGGTTACCAATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAAGATTTTGTCAAGAAGAATCCTGGTTGGGTTGAAGAGCTCAGTTTAATGGTGAAAACAAAGCAAAAGGCTGAAATTCAGGCATTGAGTTCATTTGGTTTTCAGTATTTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGACCTAAGAGTTTGTTAGTATGTATTGTAATCAATTGTTGAATTTCTGTTGCAACATTATGAAAGTTGAGAAATGATCAGGATAATGTTATTTCTGACCAAATCATATCCAGCTTTCAAAGGTATAGAAATACATGCTTTCAGGAAGGATTAGAATACATACTTTTGCTTCCAATTTCATGTTTGTTGCTCTTTTATTTTAGTTATTTGAGTGCAGTGGCATAATATTCAAGAAGAATTGAAATCACAGATCCTGATATCAATGAGGTAAGTTTATCTTAGAGGTTAGTTAAATGCAGTTTTTAAAGCTGATCTCATTGTATATCTGCATGTTCTTAGGGTTGGTCTTCTATTTAAATGGAGACTGAACAATTCTGTCCTAAGTAGAGATATGTAGTTGAAGGAATATAAACTAGTGTTTATTTTTGGTTTTCTTTCTTACTCTTTCGCGCTGACCCTTCTATTGGTAAGGTTTTGTATCAAGTTGTTTTATTCTGCATATGAAAAGTTTGGCTTCTCATTTAAAAATAAAGCTGATCAAGTAATGCAACACTAGTTTTCTTTCGAATTTTGTATCAAGTCTCTTCAATCCGCATGTTATCGCGGTTGTAACCTTTTCAAATAGGAACTAATAACCAGAACAAGAGTAGGTGTTTCTGTTGAGTTCTAACATGTGGGCTGAGACTTAGAATCTTTTATTAGTTGAGGGTGTGATGCCTTACCCAGTAGAACACTTTTGTGATTATATGCTATTGAATGTCATTTTTGTAGATTCTGCCTCTTTCTCGTAGGCTTTTCTTTGCTTTCCTTTTTTTCTTTTTCACCCTTATGCGTTTTTCATTCTTTTCCCAATAAAAGTTTGGTTATTCATGAAAAGAAAACATAGTAGTTGAACAAAAGGGGTGTATACCTTTTTATTAATGAATGACGGTAAAGATTTTCATTTGGAGTTTACAAGAGAGACCATGGAGTAAGATTACTTATACTGCTATACAGGAAAAGAAAAGTAATTACAAGATATTGAACATCATCGTTATATCTTAAACAAAAAATCATTGTGGGAGTTTTGCATTTTCTACTATTACCTATTTCTTTGCAGCCAATCTTGGAGTGATTTCTTGGTGACTTTTAGCCTCTGTACATCTGCTGGTTTCCTAGTGAAGTACTTATTCCTTCCCATAGTTCCTTTCAGTTTTGTTGTATGAGAAATTTTTGAGCTTTCTGAATTTGGTACTTTATCAAGAGCAATTGTAGGTCCTGTAGGAAGAACCTCAAGCCCTAATTCATCTTGCAAGAGTCTGGTTATTGCATCTCTCACCTCGAAGTTCTGTGGAACTAAATCTGTTTCAACTTTATTCACTTCTAAGATGATGAATATATCATCTTTTACTGATTCTCCTGCAGCCAAGATAGATAAAAAAATGTAAGTAACTATTCCTTAAGAGTAATAGATGCAGCTGAGCTTTCCTCAAGTACTATTCCCTTGTATTCATAAAAACAAACCCTGGAATGGAATGTGGCAAATAGATATTGTTCAAATATGGTAGTATGTATATTTTTCTAAGGAATATGTCAATACCTAATGCATAATTTTCCTTGATCATTCGTAAAACTGCAAGAACAACTATTCGAGCTTCAACCTGATGAAATGCAGAAGATGATTAGTCTCATGCAGGTGGGTTCTCAAATTACAAATATCAAAGGTTACTTTGCGAACTTAAGGTTGAGTTGTTTGTGCTGTTTACACAGACCTTTGTTAGCTCCTGAAGATCAATTGTAAGGCTTTCGGCAAAGCTCTTCTGCAGATGGTCGGCAACTTTTTCAAGAATCAAACATCGTGGTTTCCCAATGTCAATTTTGTTGCAGGGAGTTATCTCAACTGGCTGCTGATTGTTTTTCTGTATAACTCCTTCACACCACTCCGCAATCAACTCTTTGAGATAATGATCATTGGATTTGAACCTGAAAATTTTCAGTTAGAATAATTTCCATTACATCTAAAGAAAATAAGGGAGTCTAGGCATTGCAAAAAGGCTTGCCAAGCTAGAAGAATGATGCCCCAAAACAAACCTTTATTTTGAAAGGAAATAATAATCCTTACTATTTCAGTATTCTGAGGGCATGAAATATTGTTTTATTTTACTTCATTGTGGGGAATTTTAATACCAATCAACATGAACAAGAGACTAAAAATCAGCAACGGTAACTGGATTTCAACATGGTTCCACTACAGAGAAGGAGAAT

Coding sequence (CDS)

ATGGCCGACAAGAGAAAACGCCGGCGATCTGAACTGAATTCCGAAGACGAAGCTCAACTTCCCTTCAAGAACAAACTCAAGCCTGATTCCTTCATTCTTCAAATTCTCAAAGAGCTCAGTGACGCCTCCACTGCCTCATCTTCCTCTTCATCCAAAACCCTTGACGACCTCGGCCTCTCCTCCTCCTGCCGCGAGGTGACCGATCTTTCGCTTTCGTCCGTGCAAGCCACAATTGAATCTGTGATCCTTAAAATTGCTCGTTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGGGGCCAACCAGTTGTACGTTCCAGAGCTCGATCGAATCGTTTTGAAAGATAAAACTGCCCTCCGTCCCTACGCCAATATTTCTACTGTCCGAAAATCCACCATTACTACTCGCATTCTTCAGCTGGTCCACCAGCTCTGCATAAAAAACATCCACGTAACCAAGCGAGATCTGTTCTACACGGATGTGAAGCTCTTCCAGGATCAGACTCAGTCAGATTCTGTGCTTGATGATGTTTCTTGCATTCTCGGTTGTACAAGGTCGAGTCTCAATGTGATTGCTGCAGAGAAAGGGGTGGTTGTGGGAAGACTAATTTTTAGTGACAATGGAGATATGATAGATTGTACTAAAATGGGTATGGGAGGAAAAGCGATTCCACCAAATATTGATAGAGTTGGAGATATGCAGAGTGATGCATTGTTTATACTCTTAGTTGAGAAAGATGCTGCTTATATTAGGTTAGCTGAGGATAGATTCTACAATCGTTTTCCATGTATAATTGTGACGGCTAAGGGACAGCCAGATGTGGCCACAAGATTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTCCCAGTGCTTGCCCTTGTGGACAGTGATCCATATGGGTTGAAGATTCTATCTGTCTATGGGTGTGGATCAAAGAATATGTCTTATGACAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTGGGGATTAGGCCGAGCGATTTGGATAAATATAAGATACCTGAGCAGTGCAGGTTACCAATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAAGATTTTGTCAAGAAGAATCCTGGTTGGGTTGAAGAGCTCAGTTTAATGGTGAAAACAAAGCAAAAGGCTGAAATTCAGGCATTGAGTTCATTTGGTTTTCAGTATTTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGA

Protein sequence

MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Homology
BLAST of Cucsat.G13680.T6 vs. ExPASy Swiss-Prot
Match: Q9LZ03 (DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 6.7e-200
Identity = 360/430 (83.72%), Postives = 395/430 (91.86%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEA-QLPFKNKLKPDSFILQILKELSDAS---------TASSSSS 60
           MADK+KR+RS+   +DEA +LPFK+ L+ D  I ++LK    +S          +SSSS 
Sbjct: 1   MADKKKRKRSK---DDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSSK 60

Query: 61  SKTLDDLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYV 120
             TL DL LSSSCREV DLSLSSVQ  IE+VI++IARSIL+G+GF+F VPSR+ +NQLYV
Sbjct: 61  PLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYV 120

Query: 121 PELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQ 180
           PELDRIVLKDK+ LRP+A++S+VRK+TITTRIL L+HQLC++NIHVTKRDLFYTDVKLFQ
Sbjct: 121 PELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQ 180

Query: 181 DQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240
           DQTQSD+VLDDVSC+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP
Sbjct: 181 DQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240

Query: 241 NIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300
           NIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM
Sbjct: 241 NIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300

Query: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360
           ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ
Sbjct: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360

Query: 361 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYL 420
           CRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYL
Sbjct: 361 CRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy Swiss-Prot
Match: A2XFC1 (DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 PE=1 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 290/409 (70.90%), Postives = 350/409 (85.57%), Query Frame = 0

Query: 23  KNKLKPDSFILQILKELSDA--------STASSSSSSKTL---DDLGLSSSCREVTDLSL 82
           ++KL+PD+ IL  L+ L+ A        S++SSSS+SK L   DD   ++S   V D   
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDD--PAASYIVVADQDS 95

Query: 83  SSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANIS 142
           +SV + I  ++L  ARSILSG GF+F VPSR+ +NQ+Y+P+LDRIVL  + + RP+AN++
Sbjct: 96  ASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVA 155

Query: 143 TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRS 202
           T RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRS
Sbjct: 156 TARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRS 215

Query: 203 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKD 262
           SL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKD
Sbjct: 216 SLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKD 275

Query: 263 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 322
           AA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILS
Sbjct: 276 AAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILS 335

Query: 323 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 382
           VY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDF
Sbjct: 336 VYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDF 395

Query: 383 VKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           VK+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 VKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

BLAST of Cucsat.G13680.T6 vs. ExPASy Swiss-Prot
Match: Q0DSV9 (Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 PE=2 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 290/409 (70.90%), Postives = 350/409 (85.57%), Query Frame = 0

Query: 23  KNKLKPDSFILQILKELSDA--------STASSSSSSKTL---DDLGLSSSCREVTDLSL 82
           ++KL+PD+ IL  L+ L+ A        S++SSSS+SK L   DD   ++S   V D   
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDD--PAASYIVVADQDS 95

Query: 83  SSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANIS 142
           +SV + I  ++L  ARSILSG GF+F VPSR+ +NQ+Y+P+LDRIVL  + + RP+AN++
Sbjct: 96  ASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVA 155

Query: 143 TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRS 202
           T RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRS
Sbjct: 156 TARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRS 215

Query: 203 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKD 262
           SL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKD
Sbjct: 216 SLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKD 275

Query: 263 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 322
           AA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILS
Sbjct: 276 AAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILS 335

Query: 323 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 382
           VY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDF
Sbjct: 336 VYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDF 395

Query: 383 VKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           VK+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 VKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

BLAST of Cucsat.G13680.T6 vs. ExPASy Swiss-Prot
Match: Q9Y5K1 (Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.8e-65
Identity = 130/355 (36.62%), Postives = 219/355 (61.69%), Query Frame = 0

Query: 70  SLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYAN 129
           S S V A+IE++I  I  S+      AF + +RS    +   +   + +      R   +
Sbjct: 43  SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102

Query: 130 IS--TVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILG 189
            S  + +K ++  +IL ++++L   N + TKRD++YTD +LF +QT  D++++D+SC+L 
Sbjct: 103 DSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162

Query: 190 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFIL 249
            +R SL++++  KG++ G L +  ++G  ++CT  G    A+P NI  + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 222

Query: 250 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 309
           +VEKDA + RL +D F N+  PCI++T KG PD+ TRL ++K+     +PV  LVD+DP+
Sbjct: 223 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 282

Query: 310 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 369
           G++I+ +Y  GS +MS+++ +LT P I+WLG+ PSDL +  +P+   +P+T++D      
Sbjct: 283 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 342

Query: 370 LLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           +L   +V   P W +E+ +M  +K KAEIQAL+     YLS VYLP KL+   W+
Sbjct: 343 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396

BLAST of Cucsat.G13680.T6 vs. ExPASy Swiss-Prot
Match: Q9WTK8 (Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-64
Identity = 135/363 (37.19%), Postives = 212/363 (58.40%), Query Frame = 0

Query: 70  SLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYAN 129
           S S V   IE++I  I +S+      AF + +RS          + I+  D   LR    
Sbjct: 43  SSSEVLTAIENIIQDIIKSLARNEVPAFTIDNRS--------SWENIMFDDSVGLRMIPQ 102

Query: 130 IST----------VRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVL 189
            +T          V+K  +  ++L ++++L   + + TKRD++YTD +LF +Q   DS +
Sbjct: 103 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAI 162

Query: 190 DDVSCILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDM 249
           DD+SC+L   R SL+V++  KG++ G L +  ++G  + CT       A+P NI  +  +
Sbjct: 163 DDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHL 222

Query: 250 QSDALFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVL 309
            +DA F+L+VEKDA + RL +D F +R  PCI+VT KG PD+ TRL ++K+     +PV 
Sbjct: 223 ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVF 282

Query: 310 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 369
            LVD+DPYG++I+ +Y  GS +MS+++ NLT P I+WLG+ PSD+ +  IP+   +P+T+
Sbjct: 283 TLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTK 342

Query: 370 QDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 421
            D      +L+  ++   P W +EL +M  +K KAEIQAL+     YLS VYLP KL+  
Sbjct: 343 HDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFG 396

BLAST of Cucsat.G13680.T6 vs. NCBI nr
Match: XP_004142105.1 (DNA topoisomerase 6 subunit A [Cucumis sativus] >KGN54191.1 hypothetical protein Csa_018095 [Cucumis sativus])

HSP 1 Score: 813 bits (2100), Expect = 1.28e-296
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. NCBI nr
Match: XP_008447225.1 (PREDICTED: DNA topoisomerase 6 subunit A [Cucumis melo] >KAA0047308.1 DNA topoisomerase 6 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 800 bits (2066), Expect = 1.94e-291
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. NCBI nr
Match: XP_038881252.1 (DNA topoisomerase 6 subunit A [Benincasa hispida])

HSP 1 Score: 793 bits (2048), Expect = 1.07e-288
Identity = 409/420 (97.38%), Postives = 413/420 (98.33%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSE N + EAQLPFK  LKPDSFILQILKE SD+STASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSEPNPDGEAQLPFKKSLKPDSFILQILKEFSDSSTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. NCBI nr
Match: XP_022143741.1 (DNA topoisomerase 6 subunit A [Momordica charantia])

HSP 1 Score: 789 bits (2037), Expect = 5.10e-287
Identity = 404/420 (96.19%), Postives = 413/420 (98.33%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN +DEAQLPFKN+LKPDS ILQI+KE  D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. NCBI nr
Match: XP_022950775.1 (DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033876.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 786 bits (2030), Expect = 5.95e-286
Identity = 405/420 (96.43%), Postives = 409/420 (97.38%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN + EAQLPFKN LK DS ILQILKE SD STA SSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIE +ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy TrEMBL
Match: A0A0A0L216 (DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 813 bits (2100), Expect = 6.18e-297
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy TrEMBL
Match: A0A5A7TWM5 (DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 800 bits (2066), Expect = 9.40e-292
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy TrEMBL
Match: A0A1S3BGY2 (DNA topoisomerase 6 subunit A OS=Cucumis melo OX=3656 GN=LOC103489716 PE=3 SV=1)

HSP 1 Score: 800 bits (2066), Expect = 9.40e-292
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN EDEAQLPFKNKLK DSFILQILKELSD+S  SSSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy TrEMBL
Match: A0A6J1CR74 (DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=3 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 2.47e-287
Identity = 404/420 (96.19%), Postives = 413/420 (98.33%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN +DEAQLPFKN+LKPDS ILQI+KE  D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

BLAST of Cucsat.G13680.T6 vs. ExPASy TrEMBL
Match: A0A6J1GGP2 (DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3 SV=1)

HSP 1 Score: 786 bits (2030), Expect = 2.88e-286
Identity = 405/420 (96.43%), Postives = 409/420 (97.38%), Query Frame = 0

Query: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60
           MADKRKRRRSELN + EAQLPFKN LK DS ILQILKE SD STA SSSSSKTLDDLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120
           SSCREVTDLSLSSVQ+TIE +ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LZ036.7e-20083.72DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1[more]
A2XFC17.2e-16270.90DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 ... [more]
Q0DSV97.2e-16270.90Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 P... [more]
Q9Y5K12.8e-6536.62Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1[more]
Q9WTK81.8e-6437.19Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
XP_004142105.11.28e-296100.00DNA topoisomerase 6 subunit A [Cucumis sativus] >KGN54191.1 hypothetical protein... [more]
XP_008447225.11.94e-29198.33PREDICTED: DNA topoisomerase 6 subunit A [Cucumis melo] >KAA0047308.1 DNA topois... [more]
XP_038881252.11.07e-28897.38DNA topoisomerase 6 subunit A [Benincasa hispida][more]
XP_022143741.15.10e-28796.19DNA topoisomerase 6 subunit A [Momordica charantia][more]
XP_022950775.15.95e-28696.43DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomera... [more]
Match NameE-valueIdentityDescription
A0A0A0L2166.18e-297100.00DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1[more]
A0A5A7TWM59.40e-29298.33DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE... [more]
A0A1S3BGY29.40e-29298.33DNA topoisomerase 6 subunit A OS=Cucumis melo OX=3656 GN=LOC103489716 PE=3 SV=1[more]
A0A6J1CR742.47e-28796.19DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=... [more]
A0A6J1GGP22.88e-28696.43DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004085DNA topoisomerase VI, subunit APRINTSPR01552TPISMRASE6Acoord: 391..414
score: 42.19
coord: 166..183
score: 32.64
coord: 100..120
score: 30.95
coord: 275..295
score: 47.62
coord: 219..237
score: 34.87
IPR004085DNA topoisomerase VI, subunit AHAMAPMF_00132Top6Acoord: 68..420
score: 36.319901
IPR002815Spo11/DNA topoisomerase VI subunit APRINTSPR01550TOP6AFAMILYcoord: 269..290
score: 49.43
coord: 158..169
score: 53.65
coord: 172..189
score: 39.24
coord: 301..317
score: 55.15
coord: 190..205
score: 44.92
coord: 245..262
score: 51.04
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 46..420
NoneNo IPR availableGENE3D3.40.1360.10coord: 199..420
e-value: 4.3E-78
score: 263.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10848:SF4DNA TOPOISOMERASE 6 SUBUNIT Acoord: 46..420
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminalPFAMPF04406TP6A_Ncoord: 134..195
e-value: 2.2E-20
score: 72.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 60..198
e-value: 6.9E-39
score: 135.1
IPR034136Topoisomerase 6 subunit A/Spo11, TOPRIM domainCDDcd00223TOPRIM_TopoIIB_SPOcoord: 244..404
e-value: 1.93884E-72
score: 222.515
IPR036078Spo11/DNA topoisomerase VI subunit A superfamilySUPERFAMILY56726DNA topoisomerase IV, alpha subunitcoord: 134..420

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13680Cucsat.G13680gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13680.T6.E1Cucsat.G13680.T6.E1exon
Cucsat.G13680.T6.E2Cucsat.G13680.T6.E2exon
Cucsat.G13680.T6.E3Cucsat.G13680.T6.E3exon
Cucsat.G13680.T6.E4Cucsat.G13680.T6.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13680.T6.C1Cucsat.G13680.T6.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13680.T6Cucsat.G13680.T6-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
biological_process GO:0098869 cellular oxidant detoxification
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0006265 DNA topological change
biological_process GO:0000706 meiotic DNA double-strand break processing
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0042138 meiotic DNA double-strand break formation
cellular_component GO:0005694 chromosome
cellular_component GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
cellular_component GO:0000228 nuclear chromosome
molecular_function GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016209 antioxidant activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0019205 nucleobase-containing compound kinase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016776 phosphotransferase activity, phosphate group as acceptor