Cucsat.G13206 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13206
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	mediator of RNA polymerase II transcription subunit 15a-like
Location	ctg1838: 2203474 .. 2207899 (+)
RNA-Seq Expression	Cucsat.G13206
Synteny	Cucsat.G13206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGTAAGTTTCAACATTTGAATCTTTCGTCTCCCCCTAAACCCAAAAGAAGAAACTGCTTCTACTACTCACTTCTTTCAAACTCTCCGTTTTCCTCTTCTTTCCCTCTCTTTCCCTCTCTCCATCTCCATTCTATTTCTCACTCTTTTTCTCATATCCTTCTCTCTTCACTTCCTTCAATCACTCCATCCCTTGATTCTACCTTCCTCTCTGATTATGTAGGGTTTTTTTTTTTTTTCTTTTTTTTCTTTCTGTTTGCTTACTGGACAAGAAAGCTAGTATGGCTACTCCAACTGATTGGAGGACGGAAATAACTCAAGAAACTAGACAGCAAATTGTTCGTTCAATGTAATATTTCCTAAACTTGTACTCTGCTTTATTTATTTATTTATTTTAGACTTTTTAAGTGCTGCTTATTGATGTTTGATTACGATTACTTTGTTGCCTTTTTTTTTTCTAATTTCGTTGTTGAATTGAAAATTTCGTGCATTATTGCTTGAGTTTTACTCGATTTCCATTGATTTCTTGAATTATGAATTTGTGGATTTTATTGATAATAGTATGATATTGCAGATATATGATGTTGAAGGAACAGCCTTCTGAGTTGAATGTGAAACTAATTAGTGACCGTGCGAGGAAACATGAGATGAACTTGTTTAGTACTGCCAAATCTAAGGTATTATTAGTGAATTTTTCAATGTTTTCTAATATGAAACTGATGTTTTTCGTGCATTTGTGTTTTATTGTGTACTTTCCAATATTTGTGATCTAATCTGCTTATGCTTCTCAGGAAGAATATTTGTCTACTGGAACTGGAAAGATGATTAAGAGAGAAAATCACCAGGGGAGTTCAAGCGGTCAAGCAGTAGTGGTTTATCCGCAATATCATCAGCCAGCAGAGGCTAAGTCACTTTTGCTGCAACATATTCAGCGAACGCCACAGCTACATAGACAACATCCAAATGTGAGACAGGCACATCAACAATTTGCGATGCAGAATCAAAGCGGTGCTAGTCCACAAAATACATCAAATTCACAGTGCAGACCCCAGGGTTTCCCGAGACAAGATACTGGAATTCATCTGTCCTCAGAAATGTTCACGCAACATCCTAACTTTGTGAACTTGACCACTCAAGTTAAAAAGGTATTGAATTGTGTCTAGATGTGTAAATGGGCAGTTTGCTGGTACATCTAAATTAGATATATTGTGTTATGAAATTGAAACTGTATGTAACATAACAGGAAGTGGATAGCGAAGGTTTTATGGCCTCCAAATCCTCCGAGCAGCGTAAGCAACACTCCATGAGTGGAGCTTCTGCAGGTAAGTTTTTGTAGATGCTAAGCTTCAAATCACCTGCGATGATAATAACAACTAGCAGGAAATCTGGGAGGAAACTATTGTATTGGATTCAAACAATACTACAAAGTAGTCCGGAAACTATTGTATTGGATTCAATCAATACTACAAAGTAGTCTGGAAACTATTGTATTGGATTCAATCAATACTACAAAATAGTCCCGAAACTATTGTATTGTATTCAATCAATACTACAAAATAGTTCTTCAAGCCAAATAAGAGGGCTGTACTCTCCCCAATGAACACAGGTTCATACAAAACACATAAACAAATAAGATAACCAACCCTAACTAACATGTTGTCCATGTAGAATTTCCCTTTTTACCCCTCCTCTTATACACGGGTAATGGGTGGGCTAGTAGAGTTCCTATTTTCAAACACTATAATTTTTAGCCATATATAGATTGTGGATTTAATTTTAACAACTTGTATCTTTCATTTGCCTTTTGAATTTATGATGTTTTTAAGAAAGTGTTTAGATTCTTTTGTTTCTTAAAGTTCTTGTATTCTAAGAAATATATTTTTCTGTCACTTTTCTACTTGGCTTTTGATAGCTACGTTTGAAAAACAAAATACAATCTTTCTGGAAATTATTTTTTGATAAACTTTTTGAGAAATGTGTATTTGTGCAAACGAAATTATATGTTTTACCTCTAAAAATGAGAGCCGGCAAAATCATTATATAGTGAAGATGGATACTCTGCCTGCATGACTTATGTTTAGAAACATGGAGCTCAATCTACTTTATTAGCGAATATTTGGAACCATTACTGCGGTAGTCTGCTTATTTTTCTTTTTGTTACATAGATCCAGAAAGAATTCCAAATTCAGAAGTTTGGCATGATGCTGCTTTTGCTGAGGTAATTTTTAGTTATGAATATGAGTGAAAAATGGGAAAGGAGGTGGAAAAATATTGGCAGCCGTTGAAGATGACCAGGGTAAGAGTAACAAGGAAGAGAAAGGGAAAGAGAAATAGAAAAGAAAAAAAACAAATCAAGAAGACATTATATATATATTAATAAAGTGTTAAAGCCACCTTTTCCTTGCCAGATGGAACAGCTCAAGAAGACGTTCTTGCCTTATTTTATTAAGGCATATGAACCCTTTCGAAAGGTAATAAACTGACTTTAAATAAGTACTTCAGGGGAAACCATATTCATTGATCTTTATCCGACTTATCTCATGAAACTCTCTTCTGTCATATTTCTTATTATCCTTAAACTCTCTTCTGTCACATTTCTTAACGGTTCTTAATTTTGTAGGTTGTACACCAAGAGGGCCTACACAGGAGAGGGCTTGGGAAGACAATCGAAAGAATTCTGAGGTTTTTCCAATCGTCTAAGGAGAAAATCATTGCTTCTTACACCAAGGAGAAGTTTATTCGATGTTTGCAATATATTGAGCAAAGTGGGAACACAATTAAGAGCAATATCAATGTTGTTAATAAGCCGTCGTCCCTACATGATGGCCAGCCTGGCCTTAGTGGATCTCGCATAAACCATCCAGTTCAGCAAAGTGGTGATAATGTGAAACTCCATTGTCAATCAGTGATCCGAACTACAACTGGCTCTGGTAGTTCTTCCGTAGCACCACAAGAAATAGGATCCATAAGGTCAAAATTACATCCCCAATGGATTCATGGTTCAGGAAACACTCCATTTACTTATAGATCAGGAATCTCTTTGAATCCTCATTTGAACTCAAACTTTTCCCATGTTGCTGAGCGACCTCGTCCAACAAATCCTTGTACTTATCCATTGCATGGAAGAGCTTCTCCACCTCCATCTTCCTCTATAGTTGGACTTGAAAAAATCTCTCCAAATGTTACTTACCATTCAAGTTCGAACTTTCATTTCCGTCCACATTGTAACCCATATCAGTTACTTCATTCCAAAGCAGAAATGATCGCTGAACCTACTAGTCTTGGAATCAATGGGCAACTGTCAACGTATCAGGCTCATAATCGCTTACTTAAAGCGGTAAGTCTATGCAAGAATATCAAATGAAATGCATATTTCAAATATCAACTACTGACAGGAATGTGTTTGCATTTGTCCAATTATTTCAAATATCAACTGACAGAATGTGTTTGCATTTGTCCAATCTATTGGATTTCTCTAGGATGATAATTTCATTCTTCTTTTCCTTTGGCACTTACAATTAGTTTATTATGAGACATAACAAAATATGCAGGTTGGGTCATCATCAGAGGAAGCACTCAGAGCAGCTGTGTCGGGAATAACTTCAGTTGGGTATATGGAAGACGCGATAATAGATCCCCAGTGTCGTGCAAAGGTAACAAATTTAAGGTTGATAGACGGATTTGGTTCCTCAAATAATATGAAGCGCAAAATAAACGCAATGGCCTTAAACAACATACCATCGCCTAGCAGTGAGATTCTTGGATCTGAAGAAACAGTTACATCAAGAACAAAGAAACTCAAGAAACTGGTATGGCATCATCTTTATCTAGTCTCGTTGGAACTGTATTTCTATGCATTTTTCTTACAAATTTTCATTTCTCTACTGACAATCATGCAGTCTGATTCTTCCCTCTTAGAAGAAATGAGAAACATAAACAAGCAGTTCATCGAAACAGTCTTGGAACTAGATTTGGACGAGAACCTCAATCAACGATTAGCCAATGCGGGTACGGTTCTTCGATACTCCTATAGTGCTGTAAGTGATGGTACAAATTCTGTGAAACTGCCCGTGCTTACTATGAAGCTGCTTGTACCTCTTGATTATCCTGAAGACTATCCCGTATTTCTAAGCAAATTCGACTTGTCCTCCAGGTAACGACTGACTCTTGTATATGAGTAGTTTTCTTGTACCTTTCACTGAAGTTCTTTCATACATTTCTATAGCAACGTGGACGAAGAAAGTAGAAACCTGTCGAACGGTGCAATATCGATGTTACGTGCATTCCTTCGCACTGCTCCGGAATGTGTGTCTCTTGAAGATTATGCAAGGGCATGGGATGAATGTGCTCGCTCTGTGCTATCTGAGTATGTTCGACGTGCGGGTGGGGGAAGCTTCAGTGCTCGATATGGGTCTTGGGAGGACTCTGTTGTCGCCGCCTAACCCCTCCCTTTATTTTGAACCAAATCTATATACTATATGATCACCATGTAGTTCTTTTTTACAAATTTGCTATCTTTCTATTGTAGATTTAAGATTTAGTT

Coding sequence (CDS)

ATGGCTACTCCAACTGATTGGAGGACGGAAATAACTCAAGAAACTAGACAGCAAATTGTTCGTTCAATATATATGATGTTGAAGGAACAGCCTTCTGAGTTGAATGTGAAACTAATTAGTGACCGTGCGAGGAAACATGAGATGAACTTGTTTAGTACTGCCAAATCTAAGGAAGAATATTTGTCTACTGGAACTGGAAAGATGATTAAGAGAGAAAATCACCAGGGGAGTTCAAGCGGTCAAGCAGTAGTGGTTTATCCGCAATATCATCAGCCAGCAGAGGCTAAGTCACTTTTGCTGCAACATATTCAGCGAACGCCACAGCTACATAGACAACATCCAAATGTGAGACAGGCACATCAACAATTTGCGATGCAGAATCAAAGCGGTGCTAGTCCACAAAATACATCAAATTCACAGTGCAGACCCCAGGGTTTCCCGAGACAAGATACTGGAATTCATCTGTCCTCAGAAATGTTCACGCAACATCCTAACTTTGTGAACTTGACCACTCAAGTTAAAAAGGAAGTGGATAGCGAAGGTTTTATGGCCTCCAAATCCTCCGAGCAGCGTAAGCAACACTCCATGAGTGGAGCTTCTGCAGATCCAGAAAGAATTCCAAATTCAGAAGTTTGGCATGATGCTGCTTTTGCTGAGATGGAACAGCTCAAGAAGACGTTCTTGCCTTATTTTATTAAGGCATATGAACCCTTTCGAAAGGTTGTACACCAAGAGGGCCTACACAGGAGAGGGCTTGGGAAGACAATCGAAAGAATTCTGAGGTTTTTCCAATCGTCTAAGGAGAAAATCATTGCTTCTTACACCAAGGAGAAGTTTATTCGATGTTTGCAATATATTGAGCAAAGTGGGAACACAATTAAGAGCAATATCAATGTTGTTAATAAGCCGTCGTCCCTACATGATGGCCAGCCTGGCCTTAGTGGATCTCGCATAAACCATCCAGTTCAGCAAAGTGGTGATAATGTGAAACTCCATTGTCAATCAGTGATCCGAACTACAACTGGCTCTGGTAGTTCTTCCGTAGCACCACAAGAAATAGGATCCATAAGGTCAAAATTACATCCCCAATGGATTCATGGTTCAGGAAACACTCCATTTACTTATAGATCAGGAATCTCTTTGAATCCTCATTTGAACTCAAACTTTTCCCATGTTGCTGAGCGACCTCGTCCAACAAATCCTTGTACTTATCCATTGCATGGAAGAGCTTCTCCACCTCCATCTTCCTCTATAGTTGGACTTGAAAAAATCTCTCCAAATGTTACTTACCATTCAAGTTCGAACTTTCATTTCCGTCCACATTGTAACCCATATCAGTTACTTCATTCCAAAGCAGAAATGATCGCTGAACCTACTAGTCTTGGAATCAATGGGCAACTGTCAACGTATCAGGCTCATAATCGCTTACTTAAAGCGGTTGGGTCATCATCAGAGGAAGCACTCAGAGCAGCTGTGTCGGGAATAACTTCAGTTGGGTATATGGAAGACGCGATAATAGATCCCCAGTGTCGTGCAAAGGTAACAAATTTAAGGTTGATAGACGGATTTGGTTCCTCAAATAATATGAAGCGCAAAATAAACGCAATGGCCTTAAACAACATACCATCGCCTAGCAGTGAGATTCTTGGATCTGAAGAAACAGTTACATCAAGAACAAAGAAACTCAAGAAACTGTCTGATTCTTCCCTCTTAGAAGAAATGAGAAACATAAACAAGCAGTTCATCGAAACAGTCTTGGAACTAGATTTGGACGAGAACCTCAATCAACGATTAGCCAATGCGGGTACGGTTCTTCGATACTCCTATAGTGCTGTAAGTGATGGTACAAATTCTGTGAAACTGCCCGTGCTTACTATGAAGCTGCTTGTACCTCTTGATTATCCTGAAGACTATCCCGTATTTCTAAGCAAATTCGACTTGTCCTCCAGCAACGTGGACGAAGAAAGTAGAAACCTGTCGAACGGTGCAATATCGATGTTACGTGCATTCCTTCGCACTGCTCCGGAATGTGTGTCTCTTGAAGATTATGCAAGGGCATGGGATGAATGTGCTCGCTCTGTGCTATCTGAGTATGTTCGACGTGCGGGTGGGGGAAGCTTCAGTGCTCGATATGGGTCTTGGGAGGACTCTGTTGTCGCCGCCTAA

Protein sequence

MATPTDWRTEITQETRQQIVRSIYMMLKEQPSELNVKLISDRARKHEMNLFSTAKSKEEYLSTGTGKMIKRENHQGSSSGQAVVVYPQYHQPAEAKSLLLQHIQRTPQLHRQHPNVRQAHQQFAMQNQSGASPQNTSNSQCRPQGFPRQDTGIHLSSEMFTQHPNFVNLTTQVKKEVDSEGFMASKSSEQRKQHSMSGASADPERIPNSEVWHDAAFAEMEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKFIRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRTTTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPTNPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPTSLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYPVFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRAGGGSFSARYGSWEDSVVAA

Homology

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BLAST of Cucsat.G13206 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-29
Identity = 95/290 (32.76%), Postives = 149/290 (51.38%), Query Frame = 0


Query: 256  RLLKAVGSSSEEALRAAVSGITSVGYM------------------EDAIIDPQCRAKVTN 315
            RL++AV S S +AL +AVS I SV  M                  ED +   +CR +  N
Sbjct: 1049 RLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMTKCRLQARN 1108

Query: 316  LRLIDGFGSSNNMKRKINAMAL-----------NNIPSPSSEILGSEETVTSRTKKLKKL 375
                +G  ++  MKR   AM L           N      SE    E T TS  KK +  
Sbjct: 1109 FMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATSDGKKARTE 1168

Query: 376  SDSSLLEEMRNINKQFIETVLELDLDENLN-------QRLANAGTVLRYSYSAVSDG--- 435
            ++ +LLEE++ IN++ I+TV+E+  DE+           +   GT +R+S+ AVS     
Sbjct: 1169 TEHALLEEIKEINQRLIDTVVEISDDEDAADPSEVAISSIGCEGTTVRFSFIAVSLSPAL 1228

Query: 436  ----TNSVKLPVLTMKLLVPLDYPEDYPVFLSKFDLSSSNVDEESRNLSNGAISMLRAFL 495
                +++   P+  ++LLVP  YP   P  L K  + +S   +E+ +LS+ A++     L
Sbjct: 1229 KAHLSSTQMSPIQPLRLLVPCSYPNGSPSLLDKLPVETS---KENEDLSSKAMARFNILL 1288

Query: 496  RTAPECVSLEDYARAWDECARSVLSEYVRRAGGGSFSARYGSWEDSVVAA 503
            R+  + +SL+D A+ WD CAR+V+ EY ++ GGG+FS++YG+WE  V A+
Sbjct: 1289 RSLSQPMSLKDIAKTWDACARAVICEYAQQFGGGTFSSKYGTWEKYVAAS 1335

[Close]

BLAST of Cucsat.G13206 vs. ExPASy Swiss-Prot
Match: Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 75/282 (26.60%), Postives = 131/282 (46.45%), Query Frame = 0


Query: 255 NRLLKAVGSSSEEALRAAVSGITSVGYMEDAI-------------IDPQCRAKVTNLRLI 314
           +RL+KA  ++S ++L  +VS I+SV  M D I             +      +  N    
Sbjct: 661 DRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSERTRNFTTH 720

Query: 315 DGFGSSNNMKRKINAMALNNIPSPSSEILGSEE---------TVTSRTKKLKKLSDS-SL 374
           +    S  MKR IN +     P  SS+I   E+         + TS   K+  ++   +L
Sbjct: 721 EETNLSKRMKRSINIVP----PDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPGYAL 780

Query: 375 LEEMRNINKQFIETVLELDLDENLNQRLANAGTVLRYSYSAVS------DGTNSVKL--- 434
           L+E++  N + +ETV+E+  +++L       GT++  +Y+ V+      D   S K+   
Sbjct: 781 LQEIKETNGRLVETVVEICDEDSL-------GTIVTCTYAPVALSATFKDHYKSGKIIFY 840

Query: 435 --------PVLTMKLLVPLDYPEDYPVFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRT 494
                    +  ++LL P+DYP   P+ L +    +S    +  +LS    S     ++ 
Sbjct: 841 VSKCLMQAQIQPLRLLFPMDYPYSSPIVLEEISFDTS--VHKYEDLSARTRSRFSLSMKE 900

Query: 495 APECVSLEDYARAWDECARSVLSEYVRRAGGGSFSARYGSWE 497
             E    +  A+ W++CAR+ + EY  R GGG+FS++YG+WE
Sbjct: 901 FSEPGFSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWE 929

[Close]

BLAST of Cucsat.G13206 vs. NCBI nr
Match: XP_011652173.1 (uncharacterized protein LOC105434992 [Cucumis sativus] >KAE8651172.1 hypothetical protein Csa_002482 [Cucumis sativus])

HSP 1 Score: 989 bits (2558), Expect = 0.0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF
Sbjct: 220 MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 279

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
           IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT
Sbjct: 280 IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 339

Query: 121 TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT 180
           TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT
Sbjct: 340 TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT 399

Query: 181 NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT 240
           NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT
Sbjct: 400 NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT 459

Query: 241 SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL 300
           SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL
Sbjct: 460 SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL 519

Query: 301 IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK 360
           IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK
Sbjct: 520 IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK 579

Query: 361 QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP 420
           QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP
Sbjct: 580 QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP 639

Query: 421 VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV 480
           VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV
Sbjct: 640 VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV 699

Query: 481 RRAGGGSFSARYGSWEDSVVAA 502
           RRAGGGSFSARYGSWEDSVVAA
Sbjct: 700 RRAGGGSFSARYGSWEDSVVAA 721

[Close]

BLAST of Cucsat.G13206 vs. NCBI nr
Match: XP_008443239.1 (PREDICTED: uncharacterized protein LOC103486878 [Cucumis melo] >XP_008443241.1 PREDICTED: uncharacterized protein LOC103486878 [Cucumis melo] >XP_008443242.1 PREDICTED: uncharacterized protein LOC103486878 [Cucumis melo] >XP_016899629.1 PREDICTED: uncharacterized protein LOC103486878 [Cucumis melo] >ADN33883.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0053897.1 putative tartrate dehydrogenase/decarboxylase ttuC [Cucumis melo var. makuwa] >TYK25509.1 putative tartrate dehydrogenase/decarboxylase ttuC [Cucumis melo var. makuwa])

HSP 1 Score: 755 bits (1949), Expect = 9.57e-267
Identity = 411/555 (74.05%), Postives = 440/555 (79.28%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLP  IKAYEP+RKV H +  H+  L KT+ERIL FF S KEKIIASYTKE+F
Sbjct: 216 MEQLKKTFLPLIIKAYEPYRKV-HPDAQHKNRLMKTLERILTFFHSPKEKIIASYTKERF 275

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCL+YIEQ GNTIK N NV NK SSLH GQPGLSGSRINHP+QQS DNVKL CQSVIR 
Sbjct: 276 YRCLKYIEQFGNTIKCNTNVANKQSSLHGGQPGLSGSRINHPLQQS-DNVKLPCQSVIRA 335

Query: 121 TTGSGSSS--VAPQEIGSIRS---------------------KLHPQWIHGSGNTPFTYR 180
           TTGS  SS  +APQE GS+RS                     K+HPQWIH SGNTP TYR
Sbjct: 336 TTGSSGSSSPIAPQEKGSVRSETDYIQKNLLQNRQHYKSIKSKVHPQWIHASGNTPATYR 395

Query: 181 SGISLNPHLNSNFSH----------VAERPRPTNPCTYPLHGRASPPPSSSIVGLEKISP 240
           SG+SLN HLNSNFSH          VAERPRPT PCT PL+G ASP PSS IVGLEK SP
Sbjct: 396 SGMSLNHHLNSNFSHQIHDASQLCHVAERPRPTKPCTSPLYGIASPAPSSPIVGLEKTSP 455

Query: 241 NVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQLSTY 300
           NVTYHS  NF    HCNPYQLLHSK E                 +AEPTS GINGQ STY
Sbjct: 456 NVTYHSGLNFQSPQHCNPYQLLHSKTETQVPSQKIRSSSAMTSPVAEPTSPGINGQFSTY 515

Query: 301 QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSSNNMK 360
           QA++RLLKAVGSSS  ALRAAVSGITSVGYMEDAIIDP+C A VTNLRL++G GSSNNMK
Sbjct: 516 QAYSRLLKAVGSSSRAALRAAVSGITSVGYMEDAIIDPRCHAMVTNLRLLNGCGSSNNMK 575

Query: 361 RKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVLELDL 420
           RKINAMALNNIPSP S+I GSEETVTSRTKKLKK +DSSLLEE+RNINKQFIETVLELD+
Sbjct: 576 RKINAMALNNIPSPRSDIPGSEETVTSRTKKLKKHTDSSLLEEIRNINKQFIETVLELDV 635

Query: 421 DENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFLSKFD 480
           DENLN+RLANAGTVLR SYSAV DGTNS    VKLPVLTMKLLVPLDYPEDYPVFLSKFD
Sbjct: 636 DENLNRRLANAGTVLRCSYSAVIDGTNSEAYPVKLPVLTMKLLVPLDYPEDYPVFLSKFD 695

Query: 481 LSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRAGGGS 502
             SSNVDEE  NLSN A+SMLRAFLRTAPECVSLE+YAR WDECARSV+S+YV+RAGGGS
Sbjct: 696 SGSSNVDEECSNLSNEAMSMLRAFLRTAPECVSLEEYARVWDECARSVVSDYVQRAGGGS 755

[Close]

BLAST of Cucsat.G13206 vs. NCBI nr
Match: XP_038903081.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Benincasa hispida])

HSP 1 Score: 567 bits (1462), Expect = 5.67e-193
Identity = 331/559 (59.21%), Postives = 389/559 (69.59%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           ME+LKKT+LP   KA E   +VV  E + ++     +  +++F Q  ++KII +Y KEKF
Sbjct: 209 MERLKKTYLPLLEKACELSLQVVQAEQIQQQK-HDPLRGMMKFLQLPRDKIILTYDKEKF 268

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCLQ IE+ G  IKS  N+ NK   LH GQPG  GSR+N PVQQS ++VKLH Q VIR 
Sbjct: 269 YRCLQTIEKVGKAIKSKFNLGNKQQPLHGGQPGPGGSRLN-PVQQS-NSVKLHRQPVIRA 328

Query: 121 TTG--SGSSSVAPQEIGSIRSK---------------------LHPQWI----HGSGNTP 180
           TTG   G+S +A  E GS+RS+                        QW+    + +GN P
Sbjct: 329 TTGFPDGTSPIASPEKGSVRSETDCIQINLLQNRQHFENIESEFRSQWLQPKQNATGNIP 388

Query: 181 FTYRSGISLNP---------HLNSNFSHVAERPRPTNPCTYPLHGRASPPPSSSIVGLEK 240
             YRSG+SLN          H  S  S  AERP PTNPC   LHGRASP PSSSIV L+K
Sbjct: 389 AIYRSGMSLNHYCSNVSPQIHEASQLSQFAERPLPTNPCGSSLHGRASPAPSSSIVRLDK 448

Query: 241 ISPNVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQL 300
            SPNV+Y SSSNF F  +CNP + LH KAE+                 A PTSLG NGQL
Sbjct: 449 SSPNVSYLSSSNFQFPQNCNPLEFLHPKAEIEVQSQKIRSSSAMTSPFATPTSLGSNGQL 508

Query: 301 STY-QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSS 360
            T  QAHNRLLKAV S S EAL  AVSGI+SVGY +DA+IDP C AKVT++RL DG GSS
Sbjct: 509 PTATQAHNRLLKAVESLSNEALTIAVSGISSVGYSDDAMIDPWCHAKVTDVRLQDGSGSS 568

Query: 361 NNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVL 420
           NNMKRKINA ALNNIPSP S+I GSE TVTSR KKLKKLSD SLLEE+RNINKQF+ETVL
Sbjct: 569 NNMKRKINATALNNIPSPCSDITGSEPTVTSRRKKLKKLSDYSLLEELRNINKQFVETVL 628

Query: 421 ELDLDENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFL 480
           ELDLDE+LN++LANAGTVLR SYSA ++  NS    VKLPVL++KLLVPLDYPEDYPVFL
Sbjct: 629 ELDLDESLNRKLANAGTVLRCSYSAATECKNSEACPVKLPVLSVKLLVPLDYPEDYPVFL 688

Query: 481 SKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRA 502
           SKF+ +S NVD+E R+LSN A  MLRAFLRTAP+C+SL +YAR WDECARSV+SEY +RA
Sbjct: 689 SKFNTNSGNVDKEFRDLSNEATLMLRAFLRTAPDCLSLLEYARVWDECARSVVSEYAQRA 748

[Close]

BLAST of Cucsat.G13206 vs. NCBI nr
Match: XP_038903080.1 (probable mediator of RNA polymerase II transcription subunit 15c isoform X1 [Benincasa hispida])

HSP 1 Score: 567 bits (1462), Expect = 1.45e-192
Identity = 331/559 (59.21%), Postives = 389/559 (69.59%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           ME+LKKT+LP   KA E   +VV  E + ++     +  +++F Q  ++KII +Y KEKF
Sbjct: 239 MERLKKTYLPLLEKACELSLQVVQAEQIQQQK-HDPLRGMMKFLQLPRDKIILTYDKEKF 298

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCLQ IE+ G  IKS  N+ NK   LH GQPG  GSR+N PVQQS ++VKLH Q VIR 
Sbjct: 299 YRCLQTIEKVGKAIKSKFNLGNKQQPLHGGQPGPGGSRLN-PVQQS-NSVKLHRQPVIRA 358

Query: 121 TTG--SGSSSVAPQEIGSIRSK---------------------LHPQWI----HGSGNTP 180
           TTG   G+S +A  E GS+RS+                        QW+    + +GN P
Sbjct: 359 TTGFPDGTSPIASPEKGSVRSETDCIQINLLQNRQHFENIESEFRSQWLQPKQNATGNIP 418

Query: 181 FTYRSGISLNP---------HLNSNFSHVAERPRPTNPCTYPLHGRASPPPSSSIVGLEK 240
             YRSG+SLN          H  S  S  AERP PTNPC   LHGRASP PSSSIV L+K
Sbjct: 419 AIYRSGMSLNHYCSNVSPQIHEASQLSQFAERPLPTNPCGSSLHGRASPAPSSSIVRLDK 478

Query: 241 ISPNVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQL 300
            SPNV+Y SSSNF F  +CNP + LH KAE+                 A PTSLG NGQL
Sbjct: 479 SSPNVSYLSSSNFQFPQNCNPLEFLHPKAEIEVQSQKIRSSSAMTSPFATPTSLGSNGQL 538

Query: 301 STY-QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSS 360
            T  QAHNRLLKAV S S EAL  AVSGI+SVGY +DA+IDP C AKVT++RL DG GSS
Sbjct: 539 PTATQAHNRLLKAVESLSNEALTIAVSGISSVGYSDDAMIDPWCHAKVTDVRLQDGSGSS 598

Query: 361 NNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVL 420
           NNMKRKINA ALNNIPSP S+I GSE TVTSR KKLKKLSD SLLEE+RNINKQF+ETVL
Sbjct: 599 NNMKRKINATALNNIPSPCSDITGSEPTVTSRRKKLKKLSDYSLLEELRNINKQFVETVL 658

Query: 421 ELDLDENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFL 480
           ELDLDE+LN++LANAGTVLR SYSA ++  NS    VKLPVL++KLLVPLDYPEDYPVFL
Sbjct: 659 ELDLDESLNRKLANAGTVLRCSYSAATECKNSEACPVKLPVLSVKLLVPLDYPEDYPVFL 718

Query: 481 SKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRA 502
           SKF+ +S NVD+E R+LSN A  MLRAFLRTAP+C+SL +YAR WDECARSV+SEY +RA
Sbjct: 719 SKFNTNSGNVDKEFRDLSNEATLMLRAFLRTAPDCLSLLEYARVWDECARSVVSEYAQRA 778

[Close]

BLAST of Cucsat.G13206 vs. NCBI nr
Match: XP_022147806.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Momordica charantia])

HSP 1 Score: 414 bits (1063), Expect = 1.36e-132
Identity = 274/576 (47.57%), Postives = 349/576 (60.59%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHR-----RGLGKTIERILRFFQSSKEKIIASY 60
           M+ LK T LP   ++YE   K+  + G        +     ++++  F +  ++KI   +
Sbjct: 236 MQGLKMTCLPLLKESYERAAKLCLEVGQTEQIQKCKNHMSLMQKMTNFLELPRDKI-TYF 295

Query: 61  TKEKFIRCLQYIEQSGNTIKS-NINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHC 120
           TKEKF + ++ IE+     ++ N  +VNK   LH GQPG+S S IN PVQ+S DN   H 
Sbjct: 296 TKEKFYQSMKSIEKFAKAHENRNTFLVNKQQPLH-GQPGISQSHIN-PVQRS-DNANPHF 355

Query: 121 QSVIRTTTGSGSSSV--APQEIGS---------------------IRSKLHPQWIH---- 180
           Q +    TGS  SS    P EIGS                     I+ +    WI     
Sbjct: 356 QPLNLAATGSSDSSSPRTPSEIGSSRPEANRIQKNLLQKRQQPEIIKQEFQSSWIQQMQK 415

Query: 181 GSGNTPFTYRSGISLNPHLNSN-----------FSHVAERPRPTNPCT--YPLHGRASPP 240
            + +     RSG+SL  HLNS             S +AER    +PC+  Y   GRASP 
Sbjct: 416 STESIQAINRSGVSLQNHLNSKHSPQSHEEASQLSKIAERALSKDPCSSVYGRDGRASPT 475

Query: 241 PSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAE 300
           PSSS VGL K S NV+  SS NF +    N   LL+SK ++                 AE
Sbjct: 476 PSSSTVGLGKSSSNVSCLSSLNFQYPETRNSVNLLNSKTKIQVKSHEIRSSGISTSQFAE 535

Query: 301 PTSLGINGQLSTY-QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDP-----QCR 360
           PTSLG +  LST  Q  NRLLKAV S S++ALR A+SGI+SVG M D + +P     +C 
Sbjct: 536 PTSLGSSQHLSTATQPLNRLLKAVDSMSDQALRTAISGISSVGNMCDTVTEPSVFGTRCH 595

Query: 361 AKVTNLRLIDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLL 420
            K  +L L DGFGSSNNMKRKI A+ LN++PSP S+  GSE TVTSR+KKLKKL+D++LL
Sbjct: 596 QKAAHLSLQDGFGSSNNMKRKICAITLNDMPSPCSDNDGSELTVTSRSKKLKKLTDNALL 655

Query: 421 EEMRNINKQFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTN-------SVKLPVL 480
           EEMRNIN++ +ETVLELD  +N+N+R ANAGTV+R +YSAVSD  N       ++KLPVL
Sbjct: 656 EEMRNINQRLVETVLELDSAQNVNRRFANAGTVVRCTYSAVSDRNNLMFHFANTLKLPVL 715

Query: 481 TMKLLVPLDYPEDYPVFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYA 501
           ++KLLVPLDYPEDYPVFLSKF+    N DEE R+LS  A SMLRAFLRTAPE +SL +YA
Sbjct: 716 SVKLLVPLDYPEDYPVFLSKFNTDCGNEDEECRDLSRKATSMLRAFLRTAPERLSLGEYA 775

[Close]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL
Match: A0A0A0LET7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G819860 PE=4 SV=1)

HSP 1 Score: 989 bits (2558), Expect = 0.0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF
Sbjct: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
           IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT
Sbjct: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120

Query: 121 TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT 180
           TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT
Sbjct: 121 TTGSGSSSVAPQEIGSIRSKLHPQWIHGSGNTPFTYRSGISLNPHLNSNFSHVAERPRPT 180

Query: 181 NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT 240
           NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT
Sbjct: 181 NPCTYPLHGRASPPPSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEMIAEPT 240

Query: 241 SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL 300
           SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL
Sbjct: 241 SLGINGQLSTYQAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRL 300

Query: 301 IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK 360
           IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK
Sbjct: 301 IDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINK 360

Query: 361 QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP 420
           QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP
Sbjct: 361 QFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTNSVKLPVLTMKLLVPLDYPEDYP 420

Query: 421 VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV 480
           VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV
Sbjct: 421 VFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYV 480

Query: 481 RRAGGGSFSARYGSWEDSVVAA 502
           RRAGGGSFSARYGSWEDSVVAA
Sbjct: 481 RRAGGGSFSARYGSWEDSVVAA 502

[Close]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL
Match: A0A1S4DUH4 (uncharacterized protein LOC103486878 OS=Cucumis melo OX=3656 GN=LOC103486878 PE=4 SV=1)

HSP 1 Score: 755 bits (1949), Expect = 4.63e-267
Identity = 411/555 (74.05%), Postives = 440/555 (79.28%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLP  IKAYEP+RKV H +  H+  L KT+ERIL FF S KEKIIASYTKE+F
Sbjct: 216 MEQLKKTFLPLIIKAYEPYRKV-HPDAQHKNRLMKTLERILTFFHSPKEKIIASYTKERF 275

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCL+YIEQ GNTIK N NV NK SSLH GQPGLSGSRINHP+QQS DNVKL CQSVIR 
Sbjct: 276 YRCLKYIEQFGNTIKCNTNVANKQSSLHGGQPGLSGSRINHPLQQS-DNVKLPCQSVIRA 335

Query: 121 TTGSGSSS--VAPQEIGSIRS---------------------KLHPQWIHGSGNTPFTYR 180
           TTGS  SS  +APQE GS+RS                     K+HPQWIH SGNTP TYR
Sbjct: 336 TTGSSGSSSPIAPQEKGSVRSETDYIQKNLLQNRQHYKSIKSKVHPQWIHASGNTPATYR 395

Query: 181 SGISLNPHLNSNFSH----------VAERPRPTNPCTYPLHGRASPPPSSSIVGLEKISP 240
           SG+SLN HLNSNFSH          VAERPRPT PCT PL+G ASP PSS IVGLEK SP
Sbjct: 396 SGMSLNHHLNSNFSHQIHDASQLCHVAERPRPTKPCTSPLYGIASPAPSSPIVGLEKTSP 455

Query: 241 NVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQLSTY 300
           NVTYHS  NF    HCNPYQLLHSK E                 +AEPTS GINGQ STY
Sbjct: 456 NVTYHSGLNFQSPQHCNPYQLLHSKTETQVPSQKIRSSSAMTSPVAEPTSPGINGQFSTY 515

Query: 301 QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSSNNMK 360
           QA++RLLKAVGSSS  ALRAAVSGITSVGYMEDAIIDP+C A VTNLRL++G GSSNNMK
Sbjct: 516 QAYSRLLKAVGSSSRAALRAAVSGITSVGYMEDAIIDPRCHAMVTNLRLLNGCGSSNNMK 575

Query: 361 RKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVLELDL 420
           RKINAMALNNIPSP S+I GSEETVTSRTKKLKK +DSSLLEE+RNINKQFIETVLELD+
Sbjct: 576 RKINAMALNNIPSPRSDIPGSEETVTSRTKKLKKHTDSSLLEEIRNINKQFIETVLELDV 635

Query: 421 DENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFLSKFD 480
           DENLN+RLANAGTVLR SYSAV DGTNS    VKLPVLTMKLLVPLDYPEDYPVFLSKFD
Sbjct: 636 DENLNRRLANAGTVLRCSYSAVIDGTNSEAYPVKLPVLTMKLLVPLDYPEDYPVFLSKFD 695

Query: 481 LSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRAGGGS 502
             SSNVDEE  NLSN A+SMLRAFLRTAPECVSLE+YAR WDECARSV+S+YV+RAGGGS
Sbjct: 696 SGSSNVDEECSNLSNEAMSMLRAFLRTAPECVSLEEYARVWDECARSVVSDYVQRAGGGS 755

[Close]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL
Match: A0A5A7UH89 (Putative tartrate dehydrogenase/decarboxylase ttuC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006580 PE=4 SV=1)

HSP 1 Score: 755 bits (1949), Expect = 4.63e-267
Identity = 411/555 (74.05%), Postives = 440/555 (79.28%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLP  IKAYEP+RKV H +  H+  L KT+ERIL FF S KEKIIASYTKE+F
Sbjct: 216 MEQLKKTFLPLIIKAYEPYRKV-HPDAQHKNRLMKTLERILTFFHSPKEKIIASYTKERF 275

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCL+YIEQ GNTIK N NV NK SSLH GQPGLSGSRINHP+QQS DNVKL CQSVIR 
Sbjct: 276 YRCLKYIEQFGNTIKCNTNVANKQSSLHGGQPGLSGSRINHPLQQS-DNVKLPCQSVIRA 335

Query: 121 TTGSGSSS--VAPQEIGSIRS---------------------KLHPQWIHGSGNTPFTYR 180
           TTGS  SS  +APQE GS+RS                     K+HPQWIH SGNTP TYR
Sbjct: 336 TTGSSGSSSPIAPQEKGSVRSETDYIQKNLLQNRQHYKSIKSKVHPQWIHASGNTPATYR 395

Query: 181 SGISLNPHLNSNFSH----------VAERPRPTNPCTYPLHGRASPPPSSSIVGLEKISP 240
           SG+SLN HLNSNFSH          VAERPRPT PCT PL+G ASP PSS IVGLEK SP
Sbjct: 396 SGMSLNHHLNSNFSHQIHDASQLCHVAERPRPTKPCTSPLYGIASPAPSSPIVGLEKTSP 455

Query: 241 NVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQLSTY 300
           NVTYHS  NF    HCNPYQLLHSK E                 +AEPTS GINGQ STY
Sbjct: 456 NVTYHSGLNFQSPQHCNPYQLLHSKTETQVPSQKIRSSSAMTSPVAEPTSPGINGQFSTY 515

Query: 301 QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSSNNMK 360
           QA++RLLKAVGSSS  ALRAAVSGITSVGYMEDAIIDP+C A VTNLRL++G GSSNNMK
Sbjct: 516 QAYSRLLKAVGSSSRAALRAAVSGITSVGYMEDAIIDPRCHAMVTNLRLLNGCGSSNNMK 575

Query: 361 RKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVLELDL 420
           RKINAMALNNIPSP S+I GSEETVTSRTKKLKK +DSSLLEE+RNINKQFIETVLELD+
Sbjct: 576 RKINAMALNNIPSPRSDIPGSEETVTSRTKKLKKHTDSSLLEEIRNINKQFIETVLELDV 635

Query: 421 DENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFLSKFD 480
           DENLN+RLANAGTVLR SYSAV DGTNS    VKLPVLTMKLLVPLDYPEDYPVFLSKFD
Sbjct: 636 DENLNRRLANAGTVLRCSYSAVIDGTNSEAYPVKLPVLTMKLLVPLDYPEDYPVFLSKFD 695

Query: 481 LSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRAGGGS 502
             SSNVDEE  NLSN A+SMLRAFLRTAPECVSLE+YAR WDECARSV+S+YV+RAGGGS
Sbjct: 696 SGSSNVDEECSNLSNEAMSMLRAFLRTAPECVSLEEYARVWDECARSVVSDYVQRAGGGS 755

[Close]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL
Match: E5GBP1 (KIX_2 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 755 bits (1949), Expect = 4.63e-267
Identity = 411/555 (74.05%), Postives = 440/555 (79.28%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHRRGLGKTIERILRFFQSSKEKIIASYTKEKF 60
           MEQLKKTFLP  IKAYEP+RKV H +  H+  L KT+ERIL FF S KEKIIASYTKE+F
Sbjct: 216 MEQLKKTFLPLIIKAYEPYRKV-HPDAQHKNRLMKTLERILTFFHSPKEKIIASYTKERF 275

Query: 61  IRCLQYIEQSGNTIKSNINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHCQSVIRT 120
            RCL+YIEQ GNTIK N NV NK SSLH GQPGLSGSRINHP+QQS DNVKL CQSVIR 
Sbjct: 276 YRCLKYIEQFGNTIKCNTNVANKQSSLHGGQPGLSGSRINHPLQQS-DNVKLPCQSVIRA 335

Query: 121 TTGSGSSS--VAPQEIGSIRS---------------------KLHPQWIHGSGNTPFTYR 180
           TTGS  SS  +APQE GS+RS                     K+HPQWIH SGNTP TYR
Sbjct: 336 TTGSSGSSSPIAPQEKGSVRSETDYIQKNLLQNRQHYKSIKSKVHPQWIHASGNTPATYR 395

Query: 181 SGISLNPHLNSNFSH----------VAERPRPTNPCTYPLHGRASPPPSSSIVGLEKISP 240
           SG+SLN HLNSNFSH          VAERPRPT PCT PL+G ASP PSS IVGLEK SP
Sbjct: 396 SGMSLNHHLNSNFSHQIHDASQLCHVAERPRPTKPCTSPLYGIASPAPSSPIVGLEKTSP 455

Query: 241 NVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAEPTSLGINGQLSTY 300
           NVTYHS  NF    HCNPYQLLHSK E                 +AEPTS GINGQ STY
Sbjct: 456 NVTYHSGLNFQSPQHCNPYQLLHSKTETQVPSQKIRSSSAMTSPVAEPTSPGINGQFSTY 515

Query: 301 QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDPQCRAKVTNLRLIDGFGSSNNMK 360
           QA++RLLKAVGSSS  ALRAAVSGITSVGYMEDAIIDP+C A VTNLRL++G GSSNNMK
Sbjct: 516 QAYSRLLKAVGSSSRAALRAAVSGITSVGYMEDAIIDPRCHAMVTNLRLLNGCGSSNNMK 575

Query: 361 RKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLLEEMRNINKQFIETVLELDL 420
           RKINAMALNNIPSP S+I GSEETVTSRTKKLKK +DSSLLEE+RNINKQFIETVLELD+
Sbjct: 576 RKINAMALNNIPSPRSDIPGSEETVTSRTKKLKKHTDSSLLEEIRNINKQFIETVLELDV 635

Query: 421 DENLNQRLANAGTVLRYSYSAVSDGTNS----VKLPVLTMKLLVPLDYPEDYPVFLSKFD 480
           DENLN+RLANAGTVLR SYSAV DGTNS    VKLPVLTMKLLVPLDYPEDYPVFLSKFD
Sbjct: 636 DENLNRRLANAGTVLRCSYSAVIDGTNSEAYPVKLPVLTMKLLVPLDYPEDYPVFLSKFD 695

Query: 481 LSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYARAWDECARSVLSEYVRRAGGGS 502
             SSNVDEE  NLSN A+SMLRAFLRTAPECVSLE+YAR WDECARSV+S+YV+RAGGGS
Sbjct: 696 SGSSNVDEECSNLSNEAMSMLRAFLRTAPECVSLEEYARVWDECARSVVSDYVQRAGGGS 755

[Close]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL
Match: A0A6J1D3G7 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016654 PE=4 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 6.59e-133
Identity = 274/576 (47.57%), Postives = 349/576 (60.59%), Query Frame = 0


Query: 1   MEQLKKTFLPYFIKAYEPFRKVVHQEGLHR-----RGLGKTIERILRFFQSSKEKIIASY 60
           M+ LK T LP   ++YE   K+  + G        +     ++++  F +  ++KI   +
Sbjct: 236 MQGLKMTCLPLLKESYERAAKLCLEVGQTEQIQKCKNHMSLMQKMTNFLELPRDKI-TYF 295

Query: 61  TKEKFIRCLQYIEQSGNTIKS-NINVVNKPSSLHDGQPGLSGSRINHPVQQSGDNVKLHC 120
           TKEKF + ++ IE+     ++ N  +VNK   LH GQPG+S S IN PVQ+S DN   H 
Sbjct: 296 TKEKFYQSMKSIEKFAKAHENRNTFLVNKQQPLH-GQPGISQSHIN-PVQRS-DNANPHF 355

Query: 121 QSVIRTTTGSGSSSV--APQEIGS---------------------IRSKLHPQWIH---- 180
           Q +    TGS  SS    P EIGS                     I+ +    WI     
Sbjct: 356 QPLNLAATGSSDSSSPRTPSEIGSSRPEANRIQKNLLQKRQQPEIIKQEFQSSWIQQMQK 415

Query: 181 GSGNTPFTYRSGISLNPHLNSN-----------FSHVAERPRPTNPCT--YPLHGRASPP 240
            + +     RSG+SL  HLNS             S +AER    +PC+  Y   GRASP 
Sbjct: 416 STESIQAINRSGVSLQNHLNSKHSPQSHEEASQLSKIAERALSKDPCSSVYGRDGRASPT 475

Query: 241 PSSSIVGLEKISPNVTYHSSSNFHFRPHCNPYQLLHSKAEM----------------IAE 300
           PSSS VGL K S NV+  SS NF +    N   LL+SK ++                 AE
Sbjct: 476 PSSSTVGLGKSSSNVSCLSSLNFQYPETRNSVNLLNSKTKIQVKSHEIRSSGISTSQFAE 535

Query: 301 PTSLGINGQLSTY-QAHNRLLKAVGSSSEEALRAAVSGITSVGYMEDAIIDP-----QCR 360
           PTSLG +  LST  Q  NRLLKAV S S++ALR A+SGI+SVG M D + +P     +C 
Sbjct: 536 PTSLGSSQHLSTATQPLNRLLKAVDSMSDQALRTAISGISSVGNMCDTVTEPSVFGTRCH 595

Query: 361 AKVTNLRLIDGFGSSNNMKRKINAMALNNIPSPSSEILGSEETVTSRTKKLKKLSDSSLL 420
            K  +L L DGFGSSNNMKRKI A+ LN++PSP S+  GSE TVTSR+KKLKKL+D++LL
Sbjct: 596 QKAAHLSLQDGFGSSNNMKRKICAITLNDMPSPCSDNDGSELTVTSRSKKLKKLTDNALL 655

Query: 421 EEMRNINKQFIETVLELDLDENLNQRLANAGTVLRYSYSAVSDGTN-------SVKLPVL 480
           EEMRNIN++ +ETVLELD  +N+N+R ANAGTV+R +YSAVSD  N       ++KLPVL
Sbjct: 656 EEMRNINQRLVETVLELDSAQNVNRRFANAGTVVRCTYSAVSDRNNLMFHFANTLKLPVL 715

Query: 481 TMKLLVPLDYPEDYPVFLSKFDLSSSNVDEESRNLSNGAISMLRAFLRTAPECVSLEDYA 501
           ++KLLVPLDYPEDYPVFLSKF+    N DEE R+LS  A SMLRAFLRTAPE +SL +YA
Sbjct: 716 SVKLLVPLDYPEDYPVFLSKFNTDCGNEDEECRDLSRKATSMLRAFLRTAPERLSLGEYA 775

The following BLAST results are available for this feature:

BLAST of Cucsat.G13206 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I171	2.3e-29	32.76	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ...	[more]
Q9SHV7	1.3e-13	26.60	Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ...	[more]

BLAST of Cucsat.G13206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652173.1	0.0	100.00	uncharacterized protein LOC105434992 [Cucumis sativus] >KAE8651172.1 hypothetica...	[more]
XP_008443239.1	9.57e-267	74.05	PREDICTED: uncharacterized protein LOC103486878 [Cucumis melo] >XP_008443241.1 P...	[more]
XP_038903081.1	5.67e-193	59.21	mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Beninca...	[more]
XP_038903080.1	1.45e-192	59.21	probable mediator of RNA polymerase II transcription subunit 15c isoform X1 [Ben...	[more]
XP_022147806.1	1.36e-132	47.57	mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Momordi...	[more]

BLAST of Cucsat.G13206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LET7	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G819860 PE=4 SV=1	[more]
A0A1S4DUH4	4.63e-267	74.05	uncharacterized protein LOC103486878 OS=Cucumis melo OX=3656 GN=LOC103486878 PE=...	[more]
A0A5A7UH89	4.63e-267	74.05	Putative tartrate dehydrogenase/decarboxylase ttuC OS=Cucumis melo var. makuwa O...	[more]
E5GBP1	4.63e-267	74.05	KIX_2 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1D3G7	6.59e-133	47.57	mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momor...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33137:SF4	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	coord: 36..477
IPR044661	Mediator of RNA polymerase II transcription subunit 15a/b/c-like	PANTHER	PTHR33137	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	coord: 36..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13206.T1	Cucsat.G13206.T1	mRNA
Cucsat.G13206.T3	Cucsat.G13206.T3	mRNA
Cucsat.G13206.T2	Cucsat.G13206.T2	mRNA
Cucsat.G13206.T4	Cucsat.G13206.T4	mRNA
Cucsat.G13206.T6	Cucsat.G13206.T6	mRNA
Cucsat.G13206.T5	Cucsat.G13206.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0003712	transcription coregulator activity