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Cucsat.G10417 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATCAACAAAAATGGAATAAATAACAAAATTTTGGCATAAATTCCCGCCAGAAATTCCCGCCTCTTCGCAGTTAGTCACTTAAAATTCTCAATCTCTCTCTCTCTCTGAATCGTGCAAGGAAGACTCGTCGTCTCACAGGTACGCATTAGAAATGGTTCTGAGCCACCAGATTTAGGGTTTGAGACTCTCTCCTACTTAGATCGTTCAGTTATGTAACAACTTGAACTTCTTCTATATTGTACGTAAGGTAGTTGCTGTGATAATCTGTTCGAAATGTTTCATTTGATCGATTGTAATCTTCTTCGCACAAAACAGTGTAATTGATTGCTCTTTCCGTGTTTGTTTCTTTTAAAGTTGGATTCTGTTTCTGCATCAATTTTGTTATACGCAACGCCATGAGTTGAGCAGAGTTACTACAGGTCATGATATTAATTGTCTGTTGTGCTAAATGTTATAGTTGCATTAAGTTGTTTGTTCCTGATGTTTTACCGTTGAGACTAAAGGATGATGTTTATTTATTTGGTGAAAGACATTTTACTTCTGTGGAATAGAGTTCTTAATTTGCTTTCCAACGCTTTTGCTTTATCCCTTGAATGTAGAAGGAGTGCTATCATATTAGATTTATAAGGGGGAAATCCCTTTATAATTATAATCTAAACATTGAACTTGTTGATCCAAGCCTTTAACTTTGAACATTGAATCAATTTAGACCTTTCCGATTAGAATTAGTTTTAATACTGTTAATGCAACCTAGCTACTTTGGTAATTTGTTGAATGCCATTATTTATAGATGATTTCGAACTTTTTAAATGGATGTAAAAATAGCTATTGATTACTAGTAATTGATTTGAATTGATTCATTGTTTATATTTTAAATTGATACAAATATAGTTTGACGTTTAGTGATACAATCTCCAAAGTTCAAGGGTAAAACTATAAACTGATTTTTGCCTTGATTTATTCAATTTGTAAGTGTAGACTACACATGTTTCCAGTTAATTTAGTCTGGATTGAACATTATACTGTCGTGATGTTATCACACTAACTGTACTATCCCAAGCATCATGCCATTCGTCATTGTTGATTTTTCAGGATATGGATACGTCAAACCCTGCAGTTTTTGTTAATGGTGAGTTATTGAGCATGCATTGTGGAAGAAAGATTCGAGCAGTGGTTCAAGTTATCCAAAGTGATGGTGGAATTGTTACGGGAAAGTCTACGGATGAACAACAATTGACTATTCATGGCTTGCCCACGGTCCCTCACATGAACTTCGTAGAGGTAGTTGGTATTGCTGAAAGCAACAAGACCATCAAGGTTGAAGATTGGACAGACTTTGGAACCACTTTTGGTATGCATTCTAACCATTTCTTTATGTTATCCTTATGAGGTAAGGATAATAAACAATCATGGATCCATCTAGTAGTAAAAAAAGAGACAGCCTCACAAACTAACTAAAAGGTTATGAGTTCAATTGACCACCTACTAGGAGTTAATTTTCTAGAATTCCCTTCCCACACAAATGTCGTAGAGTGAAACAGGTAGTCCCACAATATTAGTTTCACACGGGTTTGAAAGCTTGGCAAATGCCATTTGTTCTTTTCATGATCTATCTTTTCTCTTATCCATCATAAATGCTAGATTACATGAACTGTTTGGTATTCGGTCATAAACATATTGACAGATTTTTTTTTGTATGTTGACAAAGATCGTCTTTTCTTTTATTCCATTGTGAATCATCGTGGAATTACCGAAAGGGAGAATAGGTTTTTGTGGCGTTTTGCCTTCCCCTGACTTGCCATCCTCTGTTGTTAAGGAGGAGCAGTGTTATACCCAATTTTGCTCGGGCTTTAATGATTTGTTTTTTAAATGTTCATCAACTAAACTTGAAACTTACCTCTTTTTTCAGATACTGCATCTTACAATCAGCTATGCCAACTTGCAAATGGGGAATTCAGAAGTTTATTTATTTAGTGATTTGTAGGTACAGCATGAGAAGAAGCAAGAGGTACAATTTGTTATGTGATTTTGAGTCTTCTATGCTTGTAACTCACGTGGGAGTGTTGAACTGCTAATCTATTAAAAGAACTCCTGTTTTGGTCAATATGTATTGTACTAAGCTATAAGCTAGGAGCTAGGTACGGAATTTTCATGGACTTCTTAAGGTTCCAATTTTCACATTTTTCACTAGGAAAAACCTAAGTGTAGTTGGGTGCACACATCTTTTGTATAGTTCGACTGCCATCCAATTAGAATGTGTTAGGTTGCAGTTGCACTTTGTCGTTGGTCTTTTTCATTGGGTCATACTATTCAATCACTAGTTTTTCTTATTTGGAAATGATTATGAAATGGTGAAAATTCATTTTCATTATCCAAAAGCTACTCCGAATACATATTCAATGGTTTGAAATCAATTTAGGTCTTTTAGTTTTAGACCAAGGACAACCATTTTTATGCCAATAGCAAACACCTTTTTGTGATTGAAG ATGGATACGTCAAACCCTGCAGTTTTTGTTAATGGTGAGTTATTGAGCATGCATTGTGGAAGAAAGATTCGAGCAGTGGTTCAAGTTATCCAAAGTGATGGTGGAATTGTTACGGGAAAGTCTACGGATGAACAACAATTGACTATTCATGGCTTGCCCACGGTCCCTCACATGAACTTCGTAGAGGTAGTTGGTATTGCTGAAAGCAACAAGACCATCAAGGTTGAAGATTGGACAGACTTTGGAACCACTTTTGATACTGCATCTTACAATCAGCTATGCCAACTTGCAAATGGGGAATTCAGAAGTTTATTTATTTAG MDTSNPAVFVNGELLSMHCGRKIRAVVQVIQSDGGIVTGKSTDEQQLTIHGLPTVPHMNFVEVVGIAESNKTIKVEDWTDFGTTFDTASYNQLCQLANGEFRSLFI Homology
BLAST of Cucsat.G10417 vs. ExPASy Swiss-Prot
Match: Q6NLG7 (Replication protein A 14 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA3B PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 5.1e-32 Identity = 63/106 (59.43%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy Swiss-Prot
Match: Q9LXK1 (Replication protein A 14 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA3A PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.4e-28 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy Swiss-Prot
Match: Q9SDK9 (Replication protein A 14 kDa subunit OS=Oryza sativa subsp. japonica OX=39947 GN=RPA3 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-27 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Cucsat.G10417 vs. NCBI nr
Match: XP_004135037.1 (replication protein A 14 kDa subunit B [Cucumis sativus] >XP_011655832.1 replication protein A 14 kDa subunit B [Cucumis sativus] >XP_031740923.1 replication protein A 14 kDa subunit B [Cucumis sativus] >KGN52188.1 hypothetical protein Csa_008262 [Cucumis sativus]) HSP 1 Score: 216 bits (551), Expect = 6.13e-71 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cucsat.G10417 vs. NCBI nr
Match: XP_008446755.1 (PREDICTED: replication protein A 14 kDa subunit B-like [Cucumis melo] >XP_008446756.1 PREDICTED: replication protein A 14 kDa subunit B-like [Cucumis melo] >KAA0034652.1 replication protein A 14 kDa subunit B-like [Cucumis melo var. makuwa] >TYK09203.1 replication protein A 14 kDa subunit B-like [Cucumis melo var. makuwa]) HSP 1 Score: 209 bits (531), Expect = 6.91e-68 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cucsat.G10417 vs. NCBI nr
Match: XP_038893019.1 (replication protein A 14 kDa subunit B-like [Benincasa hispida] >XP_038893020.1 replication protein A 14 kDa subunit B-like [Benincasa hispida]) HSP 1 Score: 199 bits (506), Expect = 4.50e-64 Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cucsat.G10417 vs. NCBI nr
Match: XP_023539791.1 (replication protein A 14 kDa subunit B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187 bits (476), Expect = 1.70e-59 Identity = 91/106 (85.85%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Cucsat.G10417 vs. NCBI nr
Match: XP_022988152.1 (replication protein A 14 kDa subunit B-like [Cucurbita maxima]) HSP 1 Score: 184 bits (468), Expect = 2.82e-58 Identity = 90/106 (84.91%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy TrEMBL
Match: A0A0A0KRF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614640 PE=3 SV=1) HSP 1 Score: 216 bits (551), Expect = 2.97e-71 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy TrEMBL
Match: A0A1S3BGM8 (replication protein A 14 kDa subunit B-like OS=Cucumis melo OX=3656 GN=LOC103489388 PE=3 SV=1) HSP 1 Score: 209 bits (531), Expect = 3.34e-68 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy TrEMBL
Match: A0A5A7SU42 (Replication protein A 14 kDa subunit B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001960 PE=3 SV=1) HSP 1 Score: 209 bits (531), Expect = 3.34e-68 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy TrEMBL
Match: A0A6J1JC99 (replication protein A 14 kDa subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111485454 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 1.36e-58 Identity = 90/106 (84.91%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of Cucsat.G10417 vs. ExPASy TrEMBL
Match: A0A6J1D9X1 (replication protein A 14 kDa subunit B-like OS=Momordica charantia OX=3673 GN=LOC111018714 PE=3 SV=1) HSP 1 Score: 172 bits (437), Expect = 7.28e-54 Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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