Csor.00g233870 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g233870
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RRP15-like protein
Location	Csor_Chr11: 13567941 .. 13570217 (+)
RNA-Seq Expression	Csor.00g233870
Synteny	Csor.00g233870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGTAGTTTATACATCTTACGTGTGTTGGAGTTGTTTTCAATGGTAGTAATGAAGGATTAATCCGCCATGTTTTTGTTGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGGTATTTCCTATTATGTTTGTTGTATGATTTAGCTTGCTTCAAATTGGCTTACTCTAAATGTTTGGATATTGTAGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGGTAGTGTATCGTTTTATCTTCTATAAAGATGGGTGTGGCTGTTGATTATAGCATTTGTTGTCATACTAACATAGTTATCTCTATGCATTGGTTCTTGTTGGATTGCCAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCAAATTTATATTTCAGCCAATTTTTTGCTCTTCTATTTTGTATTCATCGCTGAATTCCGTTATTATTAATATGATACAGGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGGTATTGTGCCTCCTATGTAACTTTGATCTCAGAAGTTAACAAAATCAATAATTGTGTAGAACTAATATAATTTTCACCCTTTCTCTCTTGCTTTGTGAAAATGGCATTTGCATTCGATTAATTTGGTTTGAATCTGTAGTTCACGTTACATTGTACTGAATCTTGTAGCTTAATTTTCGACGTTGTACGATGTATGTCTTATATTTTGTTTTGGGGTTTCTGCTTTATCCTTGATGAAAACCATTTTGTGTAGTCTGACAACATACCAAAGTTCTAATTAATGAGTCATAGTAGCTTTACTATGTGATTGGAGTAACCAGTTATTTATAGGCACGTGCCTTGGATTTATCGCCCCGTTAGTTTCTCATGCTTGCTTTCTGTCAACTAATGCCTTCCCTTCCACTGTTGGCTTACGTAGTGTTATCTCGAGTTTAGCGTAACATTACTAGACCTATCATGGTTGCATACTTGCACGCTCATTCTTTCTTTCTTGACTTGTGATTATGTGAGGGGCTATTGAAGACTTAGGGTGAAACCATGTGTTGACCTTTTCATTCTATCTTGTCTCATTCTGAGTAATTTATTTGGTTTATACTGTCAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGTTGGTTATTTCTACTTTCTAGTCTTCCAATTTCCGCTATAGAATTTGATAAATTTATCAACTTTTAACGTGTTCGTAAATTCTTGTCTCAATCGCTTACAAGGGATGTTACTCTTTACAAACACCTAAGTCTCTGTACTCGAGGCAAAGCATATGTGTGGCCTGTTTAATTAACCATCATCACCGTTGTTTTTGTTTACAGTGGAATGGGGAAGGGAGGTGTATTATCTGTTTCTTCGTGTTCATAATGAATTAAAATGACCACCTCTATGTTGAACAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGTAAGATATACTTTCAAATACTAATGTCGGTTGCGCCTGTTACTCTTGGTTCCGATTTTCATATCAGTGTGATCAACTATCCTTGCAGGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

mRNA sequence

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

Coding sequence (CDS)

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

Protein sequence

MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD

Homology

[Close]

BLAST of Csor.00g233870 vs. ExPASy Swiss-Prot
Match: Q3T062 (RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10
Identity = 95/301 (31.56%), Postives = 135/301 (44.85%), Query Frame = 0


Query: 31  SGNKVKID---RKMQKLFRKRAREYNSDDEDDDTNTAASPAVGDESKVSEHNREEVEDEE 90
           +G K+KI    ++M+ +    A E    D+D   N  +  + G            +E + 
Sbjct: 12  AGKKLKISLRKKRMKMVVASVASELEDKDKDASDNEGSLGSCG------------LEKDH 71

Query: 91  FSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRA-FRAAFRSILKKSISDETLG 150
           FS G+E    D   +A   EDD     +        G  A +  A   IL K I  E+  
Sbjct: 72  FSSGDEAVEADNEDEAEPREDDNDSAAEA-----TAGANAGWADAMARILSKKI-PESKP 131

Query: 151 PILSANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSH-EKFLIGVA 210
            IL  NK+L    EKL +E  E++ + + K+E +++     VKP    D   E+ L  +A
Sbjct: 132 TILVRNKELEKEKEKLKQERLEKRKQLDKKREWEMMC---RVKPDVVKDKETERNLQRIA 191

Query: 211 TKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNA 270
           T+GVV+LFNAV K Q       K    S  K AK IS   K+ F S L     SA+  N+
Sbjct: 192 TRGVVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKDFISVLRGMDGSASEKNS 251

Query: 271 KGNTS----GDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSD 317
            G  S     +A   EGP W  LRD++M+  + +KDWDK  D       +G  LG  S  
Sbjct: 252 AGKNSKAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDKESDG-----PDGSRLGCGSDS 285

[Close]

BLAST of Csor.00g233870 vs. ExPASy Swiss-Prot
Match: Q9CYX7 (RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 70/229 (30.57%), Postives = 105/229 (45.85%), Query Frame = 0


Query: 81  EEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGV--MQPGITKFIEGCRAFRAAFRSILKK 140
           +EV+D    EG  +   D + D     D E  V   +       E      + +   + K
Sbjct: 39  DEVKDSSDGEGSCDSEMDHSDDGAAEADSEDNVESCEEDNEDAAESSAGTNSGWADAMAK 98

Query: 141 SISDET---LGPILSANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLD 200
            ++ +T      IL+ NK+L    EKL +E  E++ + + K+E ++L     VKP    D
Sbjct: 99  ILNKKTPKSKATILTKNKELEKEKEKLKQERLEKRKQLDKKREWEMLC---RVKPDVVKD 158

Query: 201 SH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELG 260
              E+ L  +AT+GVV+LFNAV K Q       K    S  K AK +S   K+ F S L 
Sbjct: 159 KEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGGSVRKRAKLMSTVSKKDFISVLR 218

Query: 261 KPTLSATNSNAKGNTSGDAAEA---EGPAWAPLRDNYMLTNSKLKDWDK 295
               ++ NS A  +      E    E P W  LRD++M+  + +KDWDK
Sbjct: 219 GMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of Csor.00g233870 vs. ExPASy Swiss-Prot
Match: Q5M947 (RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-06
Identity = 86/283 (30.39%), Postives = 133/283 (47.00%), Query Frame = 0


Query: 32  GNKVKIDRKMQKLFRKRAREYNSDDEDD-DTNTAASPAVGDESKVSEHNREEVEDEEFSE 91
           G K+K   K +K  +K A+   S  ED+   ++    +   E   S+    E + E+  E
Sbjct: 13  GGKLKRSPKKKKKMKKVAKAAVSKLEDELKDSSGGEGSCESEMDDSDDGAAEADSEDNVE 72

Query: 92  GEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRAFRAAFRSILKKSISDETLGPILS 151
             EEE N+V +++  S    SG               +  A   IL K  + ++   IL+
Sbjct: 73  SCEEE-NEVAAES--SAGTNSG---------------WADAMAKILNKK-TPKSKPTILT 132

Query: 152 ANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSH-EKFLIGVATKGV 211
            NK+L    EKL +E  E++ + + K+E ++L     VKP    D   E+ L  +AT+GV
Sbjct: 133 KNKELEKEKEKLKQERLEKRKQIDKKREWEMLC---RVKPDVIKDKEAERNLQRIATRGV 192

Query: 212 VKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNAKGNT 271
           V+LFNAV K Q       K +  S  K AK +S   K+ F S L     ++ NS+A  + 
Sbjct: 193 VQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMDGASENSSAGKSP 252

Query: 272 SGDAAEA---EGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAE 304
                E    EGP W  LRD++M+  + +KDWDK  +    A+
Sbjct: 253 KARQTEVKSEEGPGWKILRDDFMM-GASMKDWDKESEGEEPAD 272

[Close]

BLAST of Csor.00g233870 vs. NCBI nr
Match: KAG6589088.1 (RRP15-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590 bits (1520), Expect = 1.14e-211
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. NCBI nr
Match: XP_022928388.1 (RRP15-like protein [Cucurbita moschata])

HSP 1 Score: 588 bits (1517), Expect = 3.27e-211
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. NCBI nr
Match: XP_022989440.1 (RRP15-like protein [Cucurbita maxima])

HSP 1 Score: 580 bits (1495), Expect = 7.37e-208
Identity = 312/318 (98.11%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSAN+KLVAEKLAEEEAERKV GEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANRKLVAEKLAEEEAERKVTGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATN+NAKGNTSGDAAEAE PAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNNNAKGNTSGDAAEAEEPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. NCBI nr
Match: KAG7022795.1 (RRP15-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 579 bits (1493), Expect = 2.40e-207
Identity = 317/331 (95.77%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAK------- 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAK       
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKGIVPPIL 240

Query: 241 ------AISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS 300
                 +ISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS
Sbjct: 241 IFDVVRSISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS 300

Query: 301 KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD 318
           KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD
Sbjct: 301 KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD 331

[Close]

BLAST of Csor.00g233870 vs. NCBI nr
Match: XP_023529755.1 (RRP15-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575 bits (1482), Expect = 7.05e-206
Identity = 310/318 (97.48%), Postives = 313/318 (98.43%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           T TAA+PAVGDESKVSEHNREEV DEE SEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TKTAAAPAVGDESKVSEHNREEVVDEEISEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLS+TN NAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDN T
Sbjct: 241 EAFFSELGKPTLSSTNRNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL
Match: A0A6J1ENV8 (RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 1.58e-211
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL
Match: A0A6J1JMD3 (RRP15-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486494 PE=3 SV=1)

HSP 1 Score: 580 bits (1495), Expect = 3.57e-208
Identity = 312/318 (98.11%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSAN+KLVAEKLAEEEAERKV GEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANRKLVAEKLAEEEAERKVTGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATN+NAKGNTSGDAAEAE PAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNNNAKGNTSGDAAEAEEPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL
Match: A0A6J1C2C5 (RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 9.77e-165
Identity = 260/313 (83.07%), Postives = 279/313 (89.14%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           E + G KR KKIGSRNKKRPRM GG GNKVK+DRKM+KLFRKRAREYNSDD+DD+   AA
Sbjct: 9   ETVGGAKRRKKIGSRNKKRPRMTGGGGNKVKVDRKMKKLFRKRAREYNSDDDDDEEEEAA 68

Query: 66  SPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGC 125
           +PAVGDES VS  + EE  DEEF E E  EG DVN+DA LSEDDE+G +QPGITKF EGC
Sbjct: 69  APAVGDESTVSLRSPEEDRDEEFPEDEGGEGKDVNADAELSEDDENGEIQPGITKFTEGC 128

Query: 126 RAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKGH 185
           RAFRAAFRSILKKS+SDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQL+AEKGH
Sbjct: 129 RAFRAAFRSILKKSVSDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLVAEKGH 188

Query: 186 VKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFFS 245
           VKPA YLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAI+KRRKEAFFS
Sbjct: 189 VKPANYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAITKRRKEAFFS 248

Query: 246 ELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDN 305
           ELGK TLSATN N+K NTS  A +AEGPAWAPLRDNYMLTNSKLKDWDKMPD TT +ED+
Sbjct: 249 ELGKTTLSATN-NSKVNTSAGAVDAEGPAWAPLRDNYMLTNSKLKDWDKMPDTTTLSEDD 308

Query: 306 GRMLGDSSSDDDD 318
           GRML +SSSDD+D
Sbjct: 309 GRMLENSSSDDED 320

[Close]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 2.66e-162
Identity = 261/315 (82.86%), Postives = 282/315 (89.52%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           EL+RG KR KK+GSRNKKRPRMMGGSGNK K+D+KM+KLF+KRAREYNSDD+D+D   A 
Sbjct: 9   ELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDDDNDGEKA- 68

Query: 66  SPAVGDESKVSEHNREE-VEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125
            P V +ESK+  H+ EE V DEE SEGEEE   DVN+D  LSEDDE+G +QPGITKF EG
Sbjct: 69  -PTVKNESKILVHSHEEEVGDEELSEGEEER-KDVNADVELSEDDENGEIQPGITKFTEG 128

Query: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185
           CRAFRAAF SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQL+ EKG
Sbjct: 129 CRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKG 188

Query: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245
           HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAI+KRRKEAFF
Sbjct: 189 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFF 248

Query: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNT-TKAE 305
           SELGKPTLSATNSNAK NTSG AA+AEGPAWAPLRDNYMLTNSKLKDWDKMPDN  T AE
Sbjct: 249 SELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAE 308

Query: 306 DNGRMLGDSSSDDDD 318
           DNGR+L DSSSD+DD
Sbjct: 309 DNGRVLEDSSSDEDD 320

[Close]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 3.78e-162
Identity = 262/315 (83.17%), Postives = 280/315 (88.89%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           EL+RG KR KK+GSRN KRPRMMGGSGNKVKID+KM+KLF+KRAREYNSDD+DDD   A 
Sbjct: 9   ELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKA- 68

Query: 66  SPAVGDESKVS-EHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125
            P V  ESK+    + EEV DEEFSEGEEE   DVN+D  LSEDDE+G +QPGITKF EG
Sbjct: 69  -PRVKKESKILVRSHEEEVGDEEFSEGEEER-KDVNADVELSEDDENGEIQPGITKFTEG 128

Query: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185
           CRAFRAAF SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQL+ EKG
Sbjct: 129 CRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKG 188

Query: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245
           HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAI+KRRKEAFF
Sbjct: 189 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFF 248

Query: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNT-TKAE 305
           SELGKPTLSATNSNAK NTSG AA+ EGPAWAPLRDNYMLTNSKLKDWDKMPDN  T AE
Sbjct: 249 SELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAE 308

Query: 306 DNGRMLGDSSSDDDD 318
           DNGR+L DSSSD+DD
Sbjct: 309 DNGRVLEDSSSDEDD 320

[Close]

BLAST of Csor.00g233870 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 268.9 bits (686), Expect = 5.4e-72
Identity = 170/320 (53.12%), Postives = 215/320 (67.19%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMP 300
           KRRKEAF SELGK          K +T    +E E P WAPLRDNYML N KLKDWDK  
Sbjct: 251 KRRKEAFLSELGK---------TKTDTKAHKSEDEAPVWAPLRDNYMLANPKLKDWDKKQ 309

Query: 301 DNTTKAEDNGRMLGDSSSDD 317
           + T++ +D   + GD S +D
Sbjct: 311 E-TSEGDDFAGLSGDESYED 309

[Close]

BLAST of Csor.00g233870 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 258.1 bits (658), Expect = 9.5e-69
Identity = 172/358 (48.04%), Postives = 218/358 (60.89%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGKPTLSATNSNA------------------------------------- 300
           KRRKEAF SELGK        +A                                     
Sbjct: 251 KRRKEAFLSELGKTKTDTKPFDARRNKLVFCLDLAPIESHEKNHLMSESKLVFCLELASI 310

Query: 301 -KGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSDD 317
            KG+ S   +E E P WAPLRDNYML N KLKDWDK  + T++ +D   + GD S +D
Sbjct: 311 EKGSPSAHKSEDEAPVWAPLRDNYMLANPKLKDWDKKQE-TSEGDDFAGLSGDESYED 356

[Close]

BLAST of Csor.00g233870 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 224.9 bits (572), Expect = 8.9e-59
Identity = 141/253 (55.73%), Postives = 178/253 (70.36%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGK 250
           KRRKEAF SELGK
Sbjct: 251 KRRKEAFLSELGK 252

The following BLAST results are available for this feature:

BLAST of Csor.00g233870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T062	2.0e-10	31.56	RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1	[more]
Q9CYX7	1.3e-06	30.57	RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2	[more]
Q5M947	8.5e-06	30.39	RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1	[more]

BLAST of Csor.00g233870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589088.1	1.14e-211	100.00	RRP15-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928388.1	3.27e-211	99.69	RRP15-like protein [Cucurbita moschata]	[more]
XP_022989440.1	7.37e-208	98.11	RRP15-like protein [Cucurbita maxima]	[more]
KAG7022795.1	2.40e-207	95.77	RRP15-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529755.1	7.05e-206	97.48	RRP15-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g233870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENV8	1.58e-211	99.69	RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1	[more]
A0A6J1JMD3	3.57e-208	98.11	RRP15-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486494 PE=3 SV=1	[more]
A0A6J1C2C5	9.77e-165	83.07	RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1	[more]
A0A1S3CFX9	2.66e-162	82.86	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A0A0K320	3.78e-162	83.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]

BLAST of Csor.00g233870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48240.1	5.4e-72	53.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.3	9.5e-69	48.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.2	8.9e-59	55.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..318
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 128..247 e-value: 9.1E-20 score: 71.3
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 8..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g233870.m01	Csor.00g233870.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030687	preribosome, large subunit precursor