Csor.00g233870.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g233870.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RRP15-like protein
Location	Csor_Chr11: 13567941 .. 13570217 (+)
Sequence length	957
RNA-Seq Expression	Csor.00g233870.m01
Synteny	Csor.00g233870.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGTAGTTTATACATCTTACGTGTGTTGGAGTTGTTTTCAATGGTAGTAATGAAGGATTAATCCGCCATGTTTTTGTTGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGGTATTTCCTATTATGTTTGTTGTATGATTTAGCTTGCTTCAAATTGGCTTACTCTAAATGTTTGGATATTGTAGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGGTAGTGTATCGTTTTATCTTCTATAAAGATGGGTGTGGCTGTTGATTATAGCATTTGTTGTCATACTAACATAGTTATCTCTATGCATTGGTTCTTGTTGGATTGCCAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCAAATTTATATTTCAGCCAATTTTTTGCTCTTCTATTTTGTATTCATCGCTGAATTCCGTTATTATTAATATGATACAGGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGGTATTGTGCCTCCTATGTAACTTTGATCTCAGAAGTTAACAAAATCAATAATTGTGTAGAACTAATATAATTTTCACCCTTTCTCTCTTGCTTTGTGAAAATGGCATTTGCATTCGATTAATTTGGTTTGAATCTGTAGTTCACGTTACATTGTACTGAATCTTGTAGCTTAATTTTCGACGTTGTACGATGTATGTCTTATATTTTGTTTTGGGGTTTCTGCTTTATCCTTGATGAAAACCATTTTGTGTAGTCTGACAACATACCAAAGTTCTAATTAATGAGTCATAGTAGCTTTACTATGTGATTGGAGTAACCAGTTATTTATAGGCACGTGCCTTGGATTTATCGCCCCGTTAGTTTCTCATGCTTGCTTTCTGTCAACTAATGCCTTCCCTTCCACTGTTGGCTTACGTAGTGTTATCTCGAGTTTAGCGTAACATTACTAGACCTATCATGGTTGCATACTTGCACGCTCATTCTTTCTTTCTTGACTTGTGATTATGTGAGGGGCTATTGAAGACTTAGGGTGAAACCATGTGTTGACCTTTTCATTCTATCTTGTCTCATTCTGAGTAATTTATTTGGTTTATACTGTCAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGTTGGTTATTTCTACTTTCTAGTCTTCCAATTTCCGCTATAGAATTTGATAAATTTATCAACTTTTAACGTGTTCGTAAATTCTTGTCTCAATCGCTTACAAGGGATGTTACTCTTTACAAACACCTAAGTCTCTGTACTCGAGGCAAAGCATATGTGTGGCCTGTTTAATTAACCATCATCACCGTTGTTTTTGTTTACAGTGGAATGGGGAAGGGAGGTGTATTATCTGTTTCTTCGTGTTCATAATGAATTAAAATGACCACCTCTATGTTGAACAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGTAAGATATACTTTCAAATACTAATGTCGGTTGCGCCTGTTACTCTTGGTTCCGATTTTCATATCAGTGTGATCAACTATCCTTGCAGGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

mRNA sequence

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

Coding sequence (CDS)

ATGGCTGAGGAAGGGGAATTGATGAGAGGTACGAAGAGGAGTAAAAAGATCGGTTCTAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAGGAAAATGCAGAAACTTTTTCGAAAACGAGCGCGGGAGTATAATTCAGATGATGAAGATGATGACACAAATACTGCAGCGTCTCCAGCGGTTGGAGATGAGAGCAAAGTTTCAGAGCACAATCGCGAGGAGGTTGAAGATGAAGAGTTTTCTGAGGGTGAAGAAGAGGAAGGGAACGATGTGAATTCGGATGCGGGGCTTTCCGAAGACGATGAGAGTGGTGTAATGCAACCGGGTATAACTAAGTTTATTGAAGGTTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTTAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTCAAAGGAGAGGCCAAGAAGGAGAAACAATTGCTGGCAGAAAAAGGGCATGTGAAGCCTGCTACTTACTTGGATTCTCATGAGAAGTTTCTTATTGGCGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCCAGAGCTAAAGATGCTAAAGCTATAAGTAAGCGCAGGAAAGAAGCCTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCAGCAACAAACAGTAATGCGAAGGGGAACACATCAGGTGATGCAGCGGAAGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGCTAAAAGATTGGGATAAGATGCCAGATAATACGACTAAAGCTGAGGACAACGGGAGAATGTTGGGTGACAGTAGTTCAGACGACGATGATTGA

Protein sequence

MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD

Homology

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BLAST of Csor.00g233870.m01 vs. ExPASy Swiss-Prot
Match: Q3T062 (RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10
Identity = 95/301 (31.56%), Postives = 135/301 (44.85%), Query Frame = 0


Query: 31  SGNKVKID---RKMQKLFRKRAREYNSDDEDDDTNTAASPAVGDESKVSEHNREEVEDEE 90
           +G K+KI    ++M+ +    A E    D+D   N  +  + G            +E + 
Sbjct: 12  AGKKLKISLRKKRMKMVVASVASELEDKDKDASDNEGSLGSCG------------LEKDH 71

Query: 91  FSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRA-FRAAFRSILKKSISDETLG 150
           FS G+E    D   +A   EDD     +        G  A +  A   IL K I  E+  
Sbjct: 72  FSSGDEAVEADNEDEAEPREDDNDSAAEA-----TAGANAGWADAMARILSKKI-PESKP 131

Query: 151 PILSANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSH-EKFLIGVA 210
            IL  NK+L    EKL +E  E++ + + K+E +++     VKP    D   E+ L  +A
Sbjct: 132 TILVRNKELEKEKEKLKQERLEKRKQLDKKREWEMMC---RVKPDVVKDKETERNLQRIA 191

Query: 211 TKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNA 270
           T+GVV+LFNAV K Q       K    S  K AK IS   K+ F S L     SA+  N+
Sbjct: 192 TRGVVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKDFISVLRGMDGSASEKNS 251

Query: 271 KGNTS----GDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSD 317
            G  S     +A   EGP W  LRD++M+  + +KDWDK  D       +G  LG  S  
Sbjct: 252 AGKNSKAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDKESDG-----PDGSRLGCGSDS 285

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy Swiss-Prot
Match: Q9CYX7 (RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 70/229 (30.57%), Postives = 105/229 (45.85%), Query Frame = 0


Query: 81  EEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGV--MQPGITKFIEGCRAFRAAFRSILKK 140
           +EV+D    EG  +   D + D     D E  V   +       E      + +   + K
Sbjct: 39  DEVKDSSDGEGSCDSEMDHSDDGAAEADSEDNVESCEEDNEDAAESSAGTNSGWADAMAK 98

Query: 141 SISDET---LGPILSANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLD 200
            ++ +T      IL+ NK+L    EKL +E  E++ + + K+E ++L     VKP    D
Sbjct: 99  ILNKKTPKSKATILTKNKELEKEKEKLKQERLEKRKQLDKKREWEMLC---RVKPDVVKD 158

Query: 201 SH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELG 260
              E+ L  +AT+GVV+LFNAV K Q       K    S  K AK +S   K+ F S L 
Sbjct: 159 KEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGGSVRKRAKLMSTVSKKDFISVLR 218

Query: 261 KPTLSATNSNAKGNTSGDAAEA---EGPAWAPLRDNYMLTNSKLKDWDK 295
               ++ NS A  +      E    E P W  LRD++M+  + +KDWDK
Sbjct: 219 GMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy Swiss-Prot
Match: Q5M947 (RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-06
Identity = 86/283 (30.39%), Postives = 133/283 (47.00%), Query Frame = 0


Query: 32  GNKVKIDRKMQKLFRKRAREYNSDDEDD-DTNTAASPAVGDESKVSEHNREEVEDEEFSE 91
           G K+K   K +K  +K A+   S  ED+   ++    +   E   S+    E + E+  E
Sbjct: 13  GGKLKRSPKKKKKMKKVAKAAVSKLEDELKDSSGGEGSCESEMDDSDDGAAEADSEDNVE 72

Query: 92  GEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGCRAFRAAFRSILKKSISDETLGPILS 151
             EEE N+V +++  S    SG               +  A   IL K  + ++   IL+
Sbjct: 73  SCEEE-NEVAAES--SAGTNSG---------------WADAMAKILNKK-TPKSKPTILT 132

Query: 152 ANKKL--VAEKLAEEEAERKVKGEAKKEKQLLAEKGHVKPATYLDSH-EKFLIGVATKGV 211
            NK+L    EKL +E  E++ + + K+E ++L     VKP    D   E+ L  +AT+GV
Sbjct: 133 KNKELEKEKEKLKQERLEKRKQIDKKREWEMLC---RVKPDVIKDKEAERNLQRIATRGV 192

Query: 212 VKLFNAVNKAQ----HAQKGLNPSRAKDAKAISKRRKEAFFSELGKPTLSATNSNAKGNT 271
           V+LFNAV K Q       K +  S  K AK +S   K+ F S L     ++ NS+A  + 
Sbjct: 193 VQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMDGASENSSAGKSP 252

Query: 272 SGDAAEA---EGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAE 304
                E    EGP W  LRD++M+  + +KDWDK  +    A+
Sbjct: 253 KARQTEVKSEEGPGWKILRDDFMM-GASMKDWDKESEGEEPAD 272

[Close]

BLAST of Csor.00g233870.m01 vs. NCBI nr
Match: KAG6589088.1 (RRP15-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590 bits (1520), Expect = 1.14e-211
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. NCBI nr
Match: XP_022928388.1 (RRP15-like protein [Cucurbita moschata])

HSP 1 Score: 588 bits (1517), Expect = 3.27e-211
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. NCBI nr
Match: XP_022989440.1 (RRP15-like protein [Cucurbita maxima])

HSP 1 Score: 580 bits (1495), Expect = 7.37e-208
Identity = 312/318 (98.11%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSAN+KLVAEKLAEEEAERKV GEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANRKLVAEKLAEEEAERKVTGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATN+NAKGNTSGDAAEAE PAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNNNAKGNTSGDAAEAEEPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. NCBI nr
Match: KAG7022795.1 (RRP15-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 579 bits (1493), Expect = 2.40e-207
Identity = 317/331 (95.77%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAK------- 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAK       
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKGIVPPIL 240

Query: 241 ------AISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS 300
                 +ISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS
Sbjct: 241 IFDVVRSISKRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNS 300

Query: 301 KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD 318
           KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD
Sbjct: 301 KLKDWDKMPDNTTKAEDNGRMLGDSSSDDDD 331

[Close]

BLAST of Csor.00g233870.m01 vs. NCBI nr
Match: XP_023529755.1 (RRP15-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575 bits (1482), Expect = 7.05e-206
Identity = 310/318 (97.48%), Postives = 313/318 (98.43%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           T TAA+PAVGDESKVSEHNREEV DEE SEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TKTAAAPAVGDESKVSEHNREEVVDEEISEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLS+TN NAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDN T
Sbjct: 241 EAFFSELGKPTLSSTNRNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL
Match: A0A6J1ENV8 (RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 1.58e-211
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL
Match: A0A6J1JMD3 (RRP15-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486494 PE=3 SV=1)

HSP 1 Score: 580 bits (1495), Expect = 3.57e-208
Identity = 312/318 (98.11%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60
           MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD
Sbjct: 1   MAEEGELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDD 60

Query: 61  TNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120
           TNTAA+PAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK
Sbjct: 61  TNTAAAPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITK 120

Query: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLL 180
           FIEGCRAFRAAFRSILKKSISDETLGPILSAN+KLVAEKLAEEEAERKV GEAKKEKQL+
Sbjct: 121 FIEGCRAFRAAFRSILKKSISDETLGPILSANRKLVAEKLAEEEAERKVTGEAKKEKQLM 180

Query: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240
           AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK
Sbjct: 181 AEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRK 240

Query: 241 EAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300
           EAFFSELGKPTLSATN+NAKGNTSGDAAEAE PAWAPLRDNYMLTNSKLKDWDKMPDNTT
Sbjct: 241 EAFFSELGKPTLSATNNNAKGNTSGDAAEAEEPAWAPLRDNYMLTNSKLKDWDKMPDNTT 300

Query: 301 KAEDNGRMLGDSSSDDDD 318
           KAEDNGRMLGDSSSDDDD
Sbjct: 301 KAEDNGRMLGDSSSDDDD 318

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL
Match: A0A6J1C2C5 (RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 9.77e-165
Identity = 260/313 (83.07%), Postives = 279/313 (89.14%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           E + G KR KKIGSRNKKRPRM GG GNKVK+DRKM+KLFRKRAREYNSDD+DD+   AA
Sbjct: 9   ETVGGAKRRKKIGSRNKKRPRMTGGGGNKVKVDRKMKKLFRKRAREYNSDDDDDEEEEAA 68

Query: 66  SPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEGC 125
           +PAVGDES VS  + EE  DEEF E E  EG DVN+DA LSEDDE+G +QPGITKF EGC
Sbjct: 69  APAVGDESTVSLRSPEEDRDEEFPEDEGGEGKDVNADAELSEDDENGEIQPGITKFTEGC 128

Query: 126 RAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKGH 185
           RAFRAAFRSILKKS+SDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQL+AEKGH
Sbjct: 129 RAFRAAFRSILKKSVSDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLVAEKGH 188

Query: 186 VKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFFS 245
           VKPA YLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAI+KRRKEAFFS
Sbjct: 189 VKPANYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAITKRRKEAFFS 248

Query: 246 ELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDN 305
           ELGK TLSATN N+K NTS  A +AEGPAWAPLRDNYMLTNSKLKDWDKMPD TT +ED+
Sbjct: 249 ELGKTTLSATN-NSKVNTSAGAVDAEGPAWAPLRDNYMLTNSKLKDWDKMPDTTTLSEDD 308

Query: 306 GRMLGDSSSDDDD 318
           GRML +SSSDD+D
Sbjct: 309 GRMLENSSSDDED 320

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 2.66e-162
Identity = 261/315 (82.86%), Postives = 282/315 (89.52%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           EL+RG KR KK+GSRNKKRPRMMGGSGNK K+D+KM+KLF+KRAREYNSDD+D+D   A 
Sbjct: 9   ELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDDDNDGEKA- 68

Query: 66  SPAVGDESKVSEHNREE-VEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125
            P V +ESK+  H+ EE V DEE SEGEEE   DVN+D  LSEDDE+G +QPGITKF EG
Sbjct: 69  -PTVKNESKILVHSHEEEVGDEELSEGEEER-KDVNADVELSEDDENGEIQPGITKFTEG 128

Query: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185
           CRAFRAAF SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQL+ EKG
Sbjct: 129 CRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKG 188

Query: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245
           HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAI+KRRKEAFF
Sbjct: 189 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFF 248

Query: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNT-TKAE 305
           SELGKPTLSATNSNAK NTSG AA+AEGPAWAPLRDNYMLTNSKLKDWDKMPDN  T AE
Sbjct: 249 SELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAE 308

Query: 306 DNGRMLGDSSSDDDD 318
           DNGR+L DSSSD+DD
Sbjct: 309 DNGRVLEDSSSDEDD 320

[Close]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 3.78e-162
Identity = 262/315 (83.17%), Postives = 280/315 (88.89%), Query Frame = 0


Query: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65
           EL+RG KR KK+GSRN KRPRMMGGSGNKVKID+KM+KLF+KRAREYNSDD+DDD   A 
Sbjct: 9   ELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKA- 68

Query: 66  SPAVGDESKVS-EHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125
            P V  ESK+    + EEV DEEFSEGEEE   DVN+D  LSEDDE+G +QPGITKF EG
Sbjct: 69  -PRVKKESKILVRSHEEEVGDEEFSEGEEER-KDVNADVELSEDDENGEIQPGITKFTEG 128

Query: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185
           CRAFRAAF SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQL+ EKG
Sbjct: 129 CRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKG 188

Query: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245
           HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAI+KRRKEAFF
Sbjct: 189 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFF 248

Query: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNT-TKAE 305
           SELGKPTLSATNSNAK NTSG AA+ EGPAWAPLRDNYMLTNSKLKDWDKMPDN  T AE
Sbjct: 249 SELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAE 308

Query: 306 DNGRMLGDSSSDDDD 318
           DNGR+L DSSSD+DD
Sbjct: 309 DNGRVLEDSSSDEDD 320

[Close]

BLAST of Csor.00g233870.m01 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 268.9 bits (686), Expect = 5.4e-72
Identity = 170/320 (53.12%), Postives = 215/320 (67.19%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMP 300
           KRRKEAF SELGK          K +T    +E E P WAPLRDNYML N KLKDWDK  
Sbjct: 251 KRRKEAFLSELGK---------TKTDTKAHKSEDEAPVWAPLRDNYMLANPKLKDWDKKQ 309

Query: 301 DNTTKAEDNGRMLGDSSSDD 317
           + T++ +D   + GD S +D
Sbjct: 311 E-TSEGDDFAGLSGDESYED 309

[Close]

BLAST of Csor.00g233870.m01 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 258.1 bits (658), Expect = 9.5e-69
Identity = 172/358 (48.04%), Postives = 218/358 (60.89%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGKPTLSATNSNA------------------------------------- 300
           KRRKEAF SELGK        +A                                     
Sbjct: 251 KRRKEAFLSELGKTKTDTKPFDARRNKLVFCLDLAPIESHEKNHLMSESKLVFCLELASI 310

Query: 301 -KGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAEDNGRMLGDSSSDD 317
            KG+ S   +E E P WAPLRDNYML N KLKDWDK  + T++ +D   + GD S +D
Sbjct: 311 EKGSPSAHKSEDEAPVWAPLRDNYMLANPKLKDWDKKQE-TSEGDDFAGLSGDESYED 356

[Close]

BLAST of Csor.00g233870.m01 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 224.9 bits (572), Expect = 8.9e-59
Identity = 141/253 (55.73%), Postives = 178/253 (70.36%), Query Frame = 0


Query: 1   MAEEGELMR--GTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNS-DDE 60
           MA+ G   R  G K+  K  +RNKK+ +    + ++ K+  K QKLF+KRAR+YNS DDE
Sbjct: 11  MADRGSRKRRVGVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDE 70

Query: 61  DDDTNTAASPAVGDESKVSEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPG 120
           ++D  +   P V    K+          EE      EE ND NSD      ++ G ++ G
Sbjct: 71  EEDDESKKQPEVTIREKIFSDANMGPNYEEIG----EEDNDENSDG-----EDHGEIESG 130

Query: 121 ITKF-IEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           ITKF  +GC AF+ AF++I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K 
Sbjct: 131 ITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKA 190

Query: 181 KQLLAEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIS 240
           K L+AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + 
Sbjct: 191 KHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLK 250

Query: 241 KRRKEAFFSELGK 250
           KRRKEAF SELGK
Sbjct: 251 KRRKEAFLSELGK 252

The following BLAST results are available for this feature:

BLAST of Csor.00g233870.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T062	2.0e-10	31.56	RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1	[more]
Q9CYX7	1.3e-06	30.57	RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2	[more]
Q5M947	8.5e-06	30.39	RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1	[more]

BLAST of Csor.00g233870.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589088.1	1.14e-211	100.00	RRP15-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928388.1	3.27e-211	99.69	RRP15-like protein [Cucurbita moschata]	[more]
XP_022989440.1	7.37e-208	98.11	RRP15-like protein [Cucurbita maxima]	[more]
KAG7022795.1	2.40e-207	95.77	RRP15-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529755.1	7.05e-206	97.48	RRP15-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g233870.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENV8	1.58e-211	99.69	RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1	[more]
A0A6J1JMD3	3.57e-208	98.11	RRP15-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486494 PE=3 SV=1	[more]
A0A6J1C2C5	9.77e-165	83.07	RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1	[more]
A0A1S3CFX9	2.66e-162	82.86	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A0A0K320	3.78e-162	83.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]

BLAST of Csor.00g233870.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48240.1	5.4e-72	53.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.3	9.5e-69	48.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.2	8.9e-59	55.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..318
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 128..247 e-value: 9.1E-20 score: 71.3
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 8..315

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g233870	Csor.00g233870	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.CDS08	Csor.00g233870.m01.CDS08	CDS
Csor.00g233870.m01.CDS07	Csor.00g233870.m01.CDS07	CDS
Csor.00g233870.m01.CDS06	Csor.00g233870.m01.CDS06	CDS
Csor.00g233870.m01.CDS05	Csor.00g233870.m01.CDS05	CDS
Csor.00g233870.m01.CDS04	Csor.00g233870.m01.CDS04	CDS
Csor.00g233870.m01.CDS03	Csor.00g233870.m01.CDS03	CDS
Csor.00g233870.m01.CDS02	Csor.00g233870.m01.CDS02	CDS
Csor.00g233870.m01.CDS01	Csor.00g233870.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.initial01	Csor.00g233870.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.start_codon01	Csor.00g233870.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.intron07	Csor.00g233870.m01.intron07	intron
Csor.00g233870.m01.intron06	Csor.00g233870.m01.intron06	intron
Csor.00g233870.m01.intron05	Csor.00g233870.m01.intron05	intron
Csor.00g233870.m01.intron04	Csor.00g233870.m01.intron04	intron
Csor.00g233870.m01.intron03	Csor.00g233870.m01.intron03	intron
Csor.00g233870.m01.intron02	Csor.00g233870.m01.intron02	intron
Csor.00g233870.m01.intron01	Csor.00g233870.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.internal06	Csor.00g233870.m01.internal06	internal
Csor.00g233870.m01.internal05	Csor.00g233870.m01.internal05	internal
Csor.00g233870.m01.internal04	Csor.00g233870.m01.internal04	internal
Csor.00g233870.m01.internal03	Csor.00g233870.m01.internal03	internal
Csor.00g233870.m01.internal02	Csor.00g233870.m01.internal02	internal
Csor.00g233870.m01.internal01	Csor.00g233870.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.terminal01	Csor.00g233870.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01.stop_codon01	Csor.00g233870.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g233870.m01	Csor.00g233870.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030687	preribosome, large subunit precursor