Csor.00g209450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCATCCAACGACGAGAGACGAAAGCCGAAGTCACCCTCATGTTGCTTCTCGATCTCCACCTTGTTCAAGTCTCGAGCCCGTAGAAAGAGGTGGGACGACGATGCGATTGCAATGGAAGATACACGAAAGGTGTGGCCAAGTGATGACGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATCGATAGAAAAGCCAAAGCTTATATCGATAGGATCCATTATCAAATCCGCTACTCCGTAGCCGAATGA ATGGCCTCATCCAACGACGAGAGACGAAAGCCGAAGTCACCCTCATGTTGCTTCTCGATCTCCACCTTGTTCAAGTCTCGAGCCCGTAGAAAGAGGTGGGACGACGATGCGATTGCAATGGAAGATACACGAAAGGTGTGGCCAAGTGATGACGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATCGATAGAAAAGCCAAAGCTTATATCGATAGGATCCATTATCAAATCCGCTACTCCGTAGCCGAATGA ATGGCCTCATCCAACGACGAGAGACGAAAGCCGAAGTCACCCTCATGTTGCTTCTCGATCTCCACCTTGTTCAAGTCTCGAGCCCGTAGAAAGAGGTGGGACGACGATGCGATTGCAATGGAAGATACACGAAAGGTGTGGCCAAGTGATGACGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATCGATAGAAAAGCCAAAGCTTATATCGATAGGATCCATTATCAAATCCGCTACTCCGTAGCCGAATGA MASSNDERRKPKSPSCCFSISTLFKSRARRKRWDDDAIAMEDTRKVWPSDDDKGRHWVAEPGIDRKAKAYIDRIHYQIRYSVAE Homology
BLAST of Csor.00g209450 vs. NCBI nr
Match: KAG6599163.1 (hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176 bits (447), Expect = 9.15e-56 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Csor.00g209450 vs. NCBI nr
Match: KAA0056089.1 (hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ96428.1 hypothetical protein E5676_scaffold546G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 121 bits (303), Expect = 8.80e-34 Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of Csor.00g209450 vs. NCBI nr
Match: KAG6586063.1 (hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112 bits (280), Expect = 2.52e-30 Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of Csor.00g209450 vs. NCBI nr
Match: XP_021898970.1 (uncharacterized protein LOC110815469 [Carica papaya]) HSP 1 Score: 77.4 bits (189), Expect = 2.31e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Csor.00g209450 vs. NCBI nr
Match: ESR41577.1 (hypothetical protein CICLE_v10013222mg [Citrus clementina]) HSP 1 Score: 73.9 bits (180), Expect = 4.98e-15 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Csor.00g209450 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1) HSP 1 Score: 121 bits (303), Expect = 4.26e-34 Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of Csor.00g209450 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 119 bits (298), Expect = 2.47e-33 Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of Csor.00g209450 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.41e-15 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Csor.00g209450 vs. ExPASy TrEMBL
Match: A0A2H5NTQ0 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073840 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.42e-15 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Csor.00g209450 vs. ExPASy TrEMBL
Match: A0A067E306 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040544mg PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.39e-14 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Csor.00g209450 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07 Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Csor.00g209450 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07 Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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