Csor.00g184210 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATGTAAGAAATTCTGCAACCTAAACTAGTTTCGGTATAGGAGAAGAATCGTTCCACGGAACAAATCAGAAGCTAAACTAATGCAACAAAAAATTGAGAGTCGAAATTCAAATAGGATATAGAGAAAATTTTGAGCGTACCTTTCAGTTTTCGCCTTTCAAGGGAAGAAGAAGAAGAAAGAAGAAGACGAGGAAGAGGAAGAAGGAGCAGAAGAAAAGTGATTACATTAGGGAGGTGACGTGGCAAAAGTCAACAGTTCCACGTAGAGAGAGGTTTTGACTCAGCTAGGTCGACGTGTAGTTGTACGCTTGTTCCGTTCCTTCTTAGAAATTTCGACATGTCGTTCAACTCACATTTTTAAGTACAGCAAGTAAAATCATAGATAAAACGAAATGATCTCGTTCGTTTAGGGACGGCGGCGAAGAGAACCGATGAAGGAAGCAGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTGGTGATCGGAGCTCTGGCCTTCGGGTATCTGAGCCTACACCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAGGTTCTCTTCAACATCCCAATTCTGAGCCCTCTACAATTCCAAAAGATGCTATTTCAAACCGCGATGATTGA ATGGCAAATGGACGGCGGCGAAGAGAACCGATGAAGGAAGCAGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTGGTGATCGGAGCTCTGGCCTTCGGGTATCTGAGCCTACACCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAGGTTCTCTTCAACATCCCAATTCTGAGCCCTCTACAATTCCAAAAGATGCTATTTCAAACCGCGATGATTGA ATGGCAAATGGACGGCGGCGAAGAGAACCGATGAAGGAAGCAGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTGGTGATCGGAGCTCTGGCCTTCGGGTATCTGAGCCTACACCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAGGTTCTCTTCAACATCCCAATTCTGAGCCCTCTACAATTCCAAAAGATGCTATTTCAAACCGCGATGATTGA MANGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIPKDAISNRDD Homology
BLAST of Csor.00g184210 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141 bits (356), Expect = 3.02e-42 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Csor.00g184210 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131 bits (330), Expect = 5.48e-38 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
BLAST of Csor.00g184210 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus]) HSP 1 Score: 104 bits (259), Expect = 2.53e-27 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Csor.00g184210 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 8.73e-23 Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Csor.00g184210 vs. NCBI nr
Match: EXB55018.1 (hypothetical protein L484_007349 [Morus notabilis]) HSP 1 Score: 71.2 bits (173), Expect = 2.01e-14 Identity = 32/51 (62.75%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of Csor.00g184210 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 1.22e-27 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Csor.00g184210 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.23e-23 Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Csor.00g184210 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.73e-15 Identity = 32/51 (62.75%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of Csor.00g184210 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.71e-14 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Csor.00g184210 vs. ExPASy TrEMBL
Match: A0A4D9BKZ9 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_022138 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 9.58e-13 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Csor.00g184210 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 1.8e-07 Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|