Csor.00g084860 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGTTATGGAATCGTGAGATTGCTGCTGTGACAATAAAGAAGCTGGACAAAGCGAAATCAACTCTTGCACAATCGTGTTTTGATGCGAACATCCTACTTGCGACGTTTTGGTCTCCACCACTCTCACCGTTCTTCTTCCTCCGTTTTCTCGGCATTTCCTTGCCGCTTTCCTTTTTTGATTTTAAAACTCCGCAGCATCACCTGCAGCGACAACCAGAACGTGACGGTTGTGGCATTCCTCTTATCGGAGCCCGCTTTCCGTCGCAGAGACTTGCACCTGCTTCCAGTTGTTCGAGACGCTCCGTTTTATTGAGCTTGATTTCCTTGGACTCTTAA ATGCTGTTATGGAATCGTGAGATTGCTGCTGTGACAATAAAGAAGCTGGACAAAGCGAAATCAACTCTTGCACAATCGTGTTTTGATGCGAACATCCTACTTGCGACGTTTTGGTCTCCACCACTCTCACCGTTCTTCTTCCTCCGTTTTCTCGGCATTTCCTTGCCGCTTTCCTTTTTTGATTTTAAAACTCCGCAGCATCACCTGCAGCGACAACCAGAACGTGACGGTTGTGGCATTCCTCTTATCGGAGCCCGCTTTCCGTCGCAGAGACTTGCACCTGCTTCCAGTTGTTCGAGACGCTCCGTTTTATTGAGCTTGATTTCCTTGGACTCTTAA ATGCTGTTATGGAATCGTGAGATTGCTGCTGTGACAATAAAGAAGCTGGACAAAGCGAAATCAACTCTTGCACAATCGTGTTTTGATGCGAACATCCTACTTGCGACGTTTTGGTCTCCACCACTCTCACCGTTCTTCTTCCTCCGTTTTCTCGGCATTTCCTTGCCGCTTTCCTTTTTTGATTTTAAAACTCCGCAGCATCACCTGCAGCGACAACCAGAACGTGACGGTTGTGGCATTCCTCTTATCGGAGCCCGCTTTCCGTCGCAGAGACTTGCACCTGCTTCCAGTTGTTCGAGACGCTCCGTTTTATTGAGCTTGATTTCCTTGGACTCTTAA MLLWNREIAAVTIKKLDKAKSTLAQSCFDANILLATFWSPPLSPFFFLRFLGISLPLSFFDFKTPQHHLQRQPERDGCGIPLIGARFPSQRLAPASSCSRRSVLLSLISLDS Homology
BLAST of Csor.00g084860 vs. NCBI nr
Match: KAG6575399.1 (hypothetical protein SDJN03_26038, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 225 bits (574), Expect = 2.96e-74 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Csor.00g084860 vs. NCBI nr
Match: KAG7013938.1 (Metal tolerance protein C4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220 bits (560), Expect = 8.72e-68 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Csor.00g084860 vs. NCBI nr
Match: XP_038898775.1 (metal tolerance protein C4 isoform X2 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 5.25e-17 Identity = 46/67 (68.66%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Csor.00g084860 vs. NCBI nr
Match: XP_038898774.1 (metal tolerance protein C4 isoform X1 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 5.72e-17 Identity = 46/67 (68.66%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Csor.00g084860 vs. NCBI nr
Match: XP_022151077.1 (metal tolerance protein C4 [Momordica charantia]) HSP 1 Score: 67.0 bits (162), Expect = 3.61e-10 Identity = 36/64 (56.25%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Csor.00g084860 vs. ExPASy TrEMBL
Match: A0A6J1DCJ1 (metal tolerance protein C4 OS=Momordica charantia OX=3673 GN=LOC111019096 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.75e-10 Identity = 36/64 (56.25%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Csor.00g084860 vs. ExPASy TrEMBL
Match: A0A1L5J031 (Metal tolerance protein 7 OS=Cucumis sativus OX=3659 GN=MTP7 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.43e-10 Identity = 41/71 (57.75%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of Csor.00g084860 vs. ExPASy TrEMBL
Match: A0A1S3CGZ0 (metal tolerance protein C4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500625 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.27e-10 Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of Csor.00g084860 vs. ExPASy TrEMBL
Match: A0A6J1KD60 (metal tolerance protein C4-like OS=Cucurbita maxima OX=3661 GN=LOC111494540 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.11e-09 Identity = 36/67 (53.73%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of Csor.00g084860 vs. ExPASy TrEMBL
Match: A0A6J1HJX8 (metal tolerance protein C4-like OS=Cucurbita moschata OX=3662 GN=LOC111464242 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.37e-08 Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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