CsaV3_7G022970 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACAAATGATGCGTTTCACAGAATATAATAATGGGGAGGAACCGAAATCCAAGTATTCAAGTGTAGTGAAAGTGGAGCTAAAGGAATGGGGGGAGAAGGATTAAGAAAGCTCACAGTTGTGGTGCTCATCTTCCTAGCCTTTGCTTCTGGTAATTTGATCCTCCTGCTTGTTCATGGTTTATGCCTTAGGACTCTGAAGAGCGAAATTAGATCTATATGTATTACTAATCAAAGAATTAACCTGCATTGCATGTATTTGTTTATTTTATGAAACGTTGAGCAAAACTTTTTTTCCTTTGATTTATTTTACTGCTAGAAATGGATTATAATCTTTTTTAAGTAGATACATAGTTTGATACTCGGATTGGAATTTGCAACATCTACAAAAGATTTTGGTTGAAGTTGTAGTAAAACTTTTTGGTTGATAACGTAAAAAGAAGATTGTTGATTGTATGAATGAATGTGTGTTATTGTTACTGTGAATAAAGTCCAAACAATGAGAATTGATATTGAATGTAAAGAGCTATAAGGCAACCAAATGTTTCGAGTTTACTTGAATCCTTTTCTCTCAAGATCTCTTTGGAGCCATAATTCACTCACCAAGTGTTTCTTCTTTTCCATTAATCCCTCTGTGTTTAAAACCAAAATAGCATAGAAAATGCTCTAACTAACGACTAATATATCTCTAATGACATTCTTATCATACTGTTACAGGCTGGATGGTGGTGCAGACAGAGGGGCTGACTTGTTATAGACCGAGCACGGTGTTTCAGGGAACATGCAATACAGCTCAGGAATGTGCTATAGTTTGTTTTTATCAAGAGGGGTGGGATGATGGGTTTTGCTCGGCTGATAAATGCGTCTGTACAAAGCAATGCTGCTGCTAAGTTCAGGCATCAATGGGTTTGGATATTACCACTGTTCTTGCTTTCTTACTCCCTCATGAATAAAATAACCTCCTGCCATTCTAATCAAACACACAAGTCTACTCCTTAAGGTTTTGGCTCCATCCTCCATCTTCCAAGTTTAGGACACCACATTTTCTATAAATCTAGAACACAAAACGACAAAGACACGTTT ATGGGGGGAGAAGGATTAAGAAAGCTCACAGTTGTGGTGCTCATCTTCCTAGCCTTTGCTTCTGGCTGGATGGTGGTGCAGACAGAGGGGCTGACTTGTTATAGACCGAGCACGGTGTTTCAGGGAACATGCAATACAGCTCAGGAATGTGCTATAGTTTGTTTTTATCAAGAGGGGTGGGATGATGGGTTTTGCTCGGCTGATAAATGCGTCTGTACAAAGCAATGCTGCTGCTAA ATGGGGGGAGAAGGATTAAGAAAGCTCACAGTTGTGGTGCTCATCTTCCTAGCCTTTGCTTCTGGCTGGATGGTGGTGCAGACAGAGGGGCTGACTTGTTATAGACCGAGCACGGTGTTTCAGGGAACATGCAATACAGCTCAGGAATGTGCTATAGTTTGTTTTTATCAAGAGGGGTGGGATGATGGGTTTTGCTCGGCTGATAAATGCGTCTGTACAAAGCAATGCTGCTGCTAA MGGEGLRKLTVVVLIFLAFASGWMVVQTEGLTCYRPSTVFQGTCNTAQECAIVCFYQEGWDDGFCSADKCVCTKQCCC* Homology
BLAST of CsaV3_7G022970 vs. NCBI nr
Match: KAE8646110.1 (hypothetical protein Csa_016182 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 2.4e-39 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. NCBI nr
Match: KAA0062792.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96761.1 defensin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34 Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. NCBI nr
Match: XP_022931766.1 (defensin Tk-AMP-D4-like [Cucurbita moschata]) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. NCBI nr
Match: KAG6590329.1 (Defensin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. NCBI nr
Match: XP_023520732.1 (defensin-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.8 bits (268), Expect = 4.2e-20 Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy Swiss-Prot
Match: Q9C947 (Defensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDF2.4 PE=3 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 5.2e-05 Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy TrEMBL
Match: A0A5A7V3H5 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00550 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 8.6e-35 Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy TrEMBL
Match: A0A6J1EUK4 (defensin Tk-AMP-D4-like OS=Cucurbita moschata OX=3662 GN=LOC111438039 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.0e-21 Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy TrEMBL
Match: A0A6J1IBG0 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473130 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18 Identity = 48/76 (63.16%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy TrEMBL
Match: A0A6J1IH26 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473392 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18 Identity = 48/76 (63.16%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. ExPASy TrEMBL
Match: A0A6J1IEV4 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111475548 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18 Identity = 48/76 (63.16%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CsaV3_7G022970 vs. TAIR 10
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66 ) HSP 1 Score: 48.1 bits (113), Expect = 3.7e-06 Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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