CsaV3_3G031090 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGCGTTGGATAACAGCACCACCAGCCCATTAGTATCGTTCTAAAGCCCACACAGCTTTCCAATTGCCCATTATCTCAACTGAAGCCCATCCACTGGAAACCAATCTCAGGCCTACTAAAGCAATAGAAATATTTTGAAAAATAACTTCTTTCTACGTGATTTTACACAAATGTCTTCATTAACATTTCGTAACTTTTAACTATCATTTTATCATTCTAATATTTATTTTTAAAAATATATAATAATATAATATCATAATTATATGATATCACATCTATTCTCTATTTTATAACTTATCTAATTAATATAATAAATAATTAGATTTTTATTTTTATTTAATAATAGGATATACATTCAATTTTAATATGGTAAAAAATTGAGTTAAATACGGTAATAATATATTAAATAATTTCTACAAAATGAATAACTTTATCTTTAATAAACTTCATACGACGTCATAATTTCACATTCTTCTTTCACCTTTTTAGTGTCTTCCATCGATCAATTTAGTTGTCCTACCTTTCTGATCTATCTTTATGTCCTATTTTTCTTGTTCAACACTTCTTATTCGACTCACCTCCTTCAAGTATGTCTGGTGAGTCCATATTTCTTTCTCTTTTATGTTTATGTAAATTTTGTCATATGTAATTTCAGTTTGATTTTCTATTGAAATTTTTTGTAAATAAAAAGCACAGGGAATGCATACTTTGGTTATCTCCTTAACTAATTTTTTTATGTTATTAATTATTTTGTTTCATAAATTGTGAAGTATAGTATATAGTTATAACCAATGTATTTTCTCTTTATTATTTAAATAGTATCGTGCAATTATTATTATACACTATTTCATATCTAATATAATTTTGGATCAATATATACTCTTTCATGTATAGAATATTACATTAGAACTGACACATATACTTATACTATTTATATCATGTATGGACAAAATTGCAATATATTTTGGTTGTATCTTCAATGACTTTTTGGAATGCATATTTAAAACAATTCTTTGTTGTGACCTATATATACACTTGTATATTTAAAATAATATGTAAGCAGTAACACATATAGTTCTATTATTTCTTGTCAGGAATGGTCGAAATTGTTGTATATTACGATGATCATCTCCTTCAACTAATTGTTTCATGTTATTAATTTTCTTCCATAAATTATGTAATATAGTATACAATATGTAATAATTTTTTTCCCTTCATATTTAATACTACTGTATGGTTAATGAACTTCTTCTTTAAGTTTATGAACTTTGAACCATTTATTTATTTTTAAGATCAATGGTACACCCTGCAAACATACAACATAAAAAATATTATATAGTTTCACTATAGATCATACATTATTAAACATTAAACATCGCACACATAATATATATTTAAGTAACATACACATAATGTTTCATATAAGTTATAGTATATATTAAATACCATTAAGCATTAAGTATTAAACACCGCACAAATAATATATTATTAAGCAGCAGACACATTATATATTATATATTATACAGTAGTATATATAAAATATCATTAGCAATACATTTTCCTAATTGTATTGATATAAATTTGTACTTTCATAGAACGTAAAGTTTGTTTCAAAATTAAAGTACAATGTAAAATATGCACGTATACATTGTTATTTAATATTATGTTAAATATACATGAGTATATAATGTTCTATTTAAATCGAAAACAGTTTAAGTCACACTAAGATTTTATCAATTAACTTTCAATATATGAAATTCAATGCAAATTTGATGGAAATATAAAAAGTATATATAAGAAATTATTAAATTACATGGAATATATGAAAAATAATGTAAAACAAAAGAAAATGATGTGGTATATATATTTGCCTGCCTGTAAATATGAGTATATACTGTAAGTTACGTAACTTATATGCTCGTTTCATTGAAATTTTGCTTTATGGGAAAAAATTACAGAAATTTTTTACAATTTCATACACATAATTAATTAATATGAAACAAATATGCACTCATTGAAAAAAATTGAAGGAAAGGAACATAACGAAGAAGAATGAATTGGGAGAGAGATTGGACGAAAGAATTTTTTTTAACAAAATCACCGAAACAAAAATAATTAAGTGGTAATTTTGATTATAATATTATCATAATAGAATTAATCACGTAACATATTTACATATGATATTTAATAAATGCAAATCTTAATCACATTGAATGATCTAATTAAGAGGTGGAATAGAATAACCGGGTTAGTAGTTTGGTGTTTTGTATGGAGGAGTGATTCAAAGTGAGATGACGATAACGTTTAAGTATTTTATTTTATTATGGTCTTAGTTTAGATCCTAAATTATTGGGACTTTGATGATTTAGCTTTTACTATTTGTGTTAGTGGGTTGTTGATTGAGCCAAGTGAATGGGTAAGTTAGTAGAGTATGTAACCTGAGTTTATTATTTTTAGCAATAGTCTCTTGTTGTAAGTCTATAATAAGGCACATAAATTGTTTGTTTATTTATGCAAAAAAGAAGAAGAAAGAAGCAAACATTCTTGGTCCAAACACATTGAGAGAAAAGATAGGCAGCAATGACAATGCTATGAGTACAGCACAACCACTCATTCTGATCTTCAAACGAGAAAGCTACGAATTTTGGAGTTTTCGTATGAAGACTCTTCTCAAATTTCAAGACTTATGGAAGGAACAAGGGTATGTGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGATGAAGAAGGACTCAAAGGTGTTGGTGATCATTCAACAAGCAATCCATGACATCGTTTTTTTGTGA ATGGGGGCGTTGGATAACAGCACCACCAGCCCATTAAAGAAGAAAGAAGCAAACATTCTTGGTCCAAACACATTGAGAGAAAAGATAGGCAGCAATGACAATGCTATGAGTACAGCACAACCACTCATTCTGATCTTCAAACGAGAAAGCTACGAATTTTGGAGTTTTCGTATGAAGACTCTTCTCAAATTTCAAGACTTATGGAAGGAACAAGGGTATGTGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGATGAAGAAGGACTCAAAGGTGTTGGTGATCATTCAACAAGCAATCCATGACATCGTTTTTTTGTGA ATGGGGGCGTTGGATAACAGCACCACCAGCCCATTAAAGAAGAAAGAAGCAAACATTCTTGGTCCAAACACATTGAGAGAAAAGATAGGCAGCAATGACAATGCTATGAGTACAGCACAACCACTCATTCTGATCTTCAAACGAGAAAGCTACGAATTTTGGAGTTTTCGTATGAAGACTCTTCTCAAATTTCAAGACTTATGGAAGGAACAAGGGTATGTGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGATGAAGAAGGACTCAAAGGTGTTGGTGATCATTCAACAAGCAATCCATGACATCGTTTTTTTGTGA MGALDNSTTSPLKKKEANILGPNTLREKIGSNDNAMSTAQPLILIFKRESYEFWSFRMKTLLKFQDLWKEQGYVDPDDEGKLREKMKKDSKVLVIIQQAIHDIVFL* Homology
BLAST of CsaV3_3G031090 vs. NCBI nr
Match: KGN58648.2 (hypothetical protein Csa_001130 [Cucumis sativus]) HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. NCBI nr
Match: KAA0063655.1 (DUF4219 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 7.7e-25 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. NCBI nr
Match: TYK18372.1 (DUF4219 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 7.7e-25 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. NCBI nr
Match: KAA0032274.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 2.5e-23 Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. NCBI nr
Match: KAA0059767.1 (DUF4219 domain-containing protein [Cucumis melo var. makuwa] >TYJ99780.1 DUF4219 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 2.1e-22 Identity = 58/80 (72.50%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. ExPASy TrEMBL
Match: A0A5A7VCL4 (DUF4219 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001700 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.7e-25 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. ExPASy TrEMBL
Match: A0A5D3D4A6 (DUF4219 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00930 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.7e-25 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. ExPASy TrEMBL
Match: A0A5A7SM62 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001140 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.2e-23 Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. ExPASy TrEMBL
Match: A0A5A7UYP1 (DUF4219 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00190 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22 Identity = 58/80 (72.50%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of CsaV3_3G031090 vs. ExPASy TrEMBL
Match: A0A5A7TZP7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00180 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22 Identity = 58/79 (73.42%), Postives = 62/79 (78.48%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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