CsGy6G024835 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGAGATCATCATCGTCGTCATCATCATCGTTGTCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAAAGCAGTGAATTATTACATTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATCAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCATATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTTTCAAATATCCCACCTTTCTTACACCTTAG ATGGGGAAGAGATCATCATCGTCGTCATCATCATCGTTGTCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAAAGCAGTGAATTATTACATTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATCAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCATATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTTTCAAATATCCCACCTTTCTTACACCTTAG ATGGGGAAGAGATCATCATCGTCGTCATCATCATCGTTGTCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAAAGCAGTGAATTATTACATTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATCAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCATATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTTTCAAATATCCCACCTTTCTTACACCTTAG MGKRSSSSSSSSLSKAKVVSLVILVLSCLIWCCKSSELLHYNCEEIYVVHEGETLQSISEKCGDPFIVEENPHINDPDDVFPGLVIKITPFHHFFKYPTFLTP* Homology
BLAST of CsGy6G024835 vs. NCBI nr
Match: KAE8647420.1 (hypothetical protein Csa_003059 [Cucumis sativus]) HSP 1 Score: 207 bits (528), Expect = 1.66e-67 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsGy6G024835 vs. NCBI nr
Match: KAG6595189.1 (hypothetical protein SDJN03_11742, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027207.1 hypothetical protein SDJN02_11218, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111 bits (277), Expect = 2.31e-29 Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of CsGy6G024835 vs. NCBI nr
Match: XP_022744694.1 (uncharacterized protein LOC111295462 [Durio zibethinus]) HSP 1 Score: 104 bits (259), Expect = 1.79e-26 Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CsGy6G024835 vs. NCBI nr
Match: XP_019179717.1 (PREDICTED: uncharacterized protein LOC109174930 [Ipomoea nil]) HSP 1 Score: 103 bits (258), Expect = 2.26e-26 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy6G024835 vs. NCBI nr
Match: XP_010271716.1 (PREDICTED: uncharacterized protein LOC104607716 [Nelumbo nucifera]) HSP 1 Score: 103 bits (258), Expect = 2.68e-26 Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CsGy6G024835 vs. ExPASy TrEMBL
Match: A0A6P5YVX7 (uncharacterized protein LOC111295462 OS=Durio zibethinus OX=66656 GN=LOC111295462 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 8.65e-27 Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CsGy6G024835 vs. ExPASy TrEMBL
Match: A0A1U8AYB4 (uncharacterized protein LOC104607716 OS=Nelumbo nucifera OX=4432 GN=LOC104607716 PE=4 SV=1) HSP 1 Score: 103 bits (258), Expect = 1.30e-26 Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CsGy6G024835 vs. ExPASy TrEMBL
Match: M5WDM2 (LysM domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G113800 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 2.62e-26 Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsGy6G024835 vs. ExPASy TrEMBL
Match: A0A6J5Y0Z0 (LysM domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS44437 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 2.62e-26 Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsGy6G024835 vs. ExPASy TrEMBL
Match: A0A2G2VUW0 (LysM domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_24433 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 3.31e-26 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of CsGy6G024835 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CsGy6G024835 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 87.0 bits (214), Expect = 9.5e-18 Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CsGy6G024835 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.7e-17 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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