Cp4.1LG19g04410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCGATTACTGTACCGTCGTCTCCGATCGCGGTGGCCGCTTCTTGTCTACTCCGCCTCCTGGACGATTCTCTTGACTCTCACCGTCGCCGCCGCCTCCTTCGCGCCCGAGCTCGCCTTCGCCTCCGCAATTTCTCCGTCCTCGTCCTTTGCTTCACACTGCAAGGCCGCTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGACGTCGTCTGCGTTCCGGATAATCTGTTTAGAAAATCCGGAATTGATCTCATCGTGCCTCCTATTTTCGCCGCGGTTGTAGTAGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACTCCCTCTGA ATGCTCCGATTACTGTACCGTCGTCTCCGATCGCGGTGGCCGCTTCTTGTCTACTCCGCCTCCTGGACGATTCTCTTGACTCTCACCGTCGCCGCCGCCTCCTTCGCGCCCGAGCTCGCCTTCGCCTCCGCAATTTCTCCGTCCTCGTCCTTTGCTTCACACTGCAAGGCCGCTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGACGTCGTCTGCGTTCCGGATAATCTGTTTAGAAAATCCGGAATTGATCTCATCGTGCCTCCTATTTTCGCCGCGGTTGTAGTAGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACTCCCTCTGA ATGCTCCGATTACTGTACCGTCGTCTCCGATCGCGGTGGCCGCTTCTTGTCTACTCCGCCTCCTGGACGATTCTCTTGACTCTCACCGTCGCCGCCGCCTCCTTCGCGCCCGAGCTCGCCTTCGCCTCCGCAATTTCTCCGTCCTCGTCCTTTGCTTCACACTGCAAGGCCGCTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGACGTCGTCTGCGTTCCGGATAATCTGTTTAGAAAATCCGGAATTGATCTCATCGTGCCTCCTATTTTCGCCGCGGTTGTAGTAGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACTCCCTCTGA MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDSL Homology
BLAST of Cp4.1LG19g04410 vs. NCBI nr
Match: XP_022963374.1 (uncharacterized protein LOC111463600 [Cucurbita moschata] >XP_023517164.1 uncharacterized protein LOC111781002 [Cucurbita pepo subsp. pepo] >KAG6595307.1 hypothetical protein SDJN03_11860, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027317.1 hypothetical protein SDJN02_11329, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 227 bits (579), Expect = 6.86e-75 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. NCBI nr
Match: XP_022972738.1 (uncharacterized protein LOC111471253 [Cucurbita maxima]) HSP 1 Score: 225 bits (574), Expect = 3.97e-74 Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. NCBI nr
Match: XP_038883336.1 (uncharacterized protein LOC120074319 [Benincasa hispida]) HSP 1 Score: 209 bits (532), Expect = 1.01e-67 Identity = 105/116 (90.52%), Postives = 110/116 (94.83%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. NCBI nr
Match: XP_004142209.1 (uncharacterized protein LOC101207834 [Cucumis sativus] >KGN54232.1 hypothetical protein Csa_018146 [Cucumis sativus]) HSP 1 Score: 204 bits (520), Expect = 7.31e-66 Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. NCBI nr
Match: KAA0032619.1 (uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa] >TYK23500.1 uncharacterized protein E5676_scaffold500G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 202 bits (515), Expect = 4.23e-65 Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. ExPASy TrEMBL
Match: A0A6J1HJX3 (uncharacterized protein LOC111463600 OS=Cucurbita moschata OX=3662 GN=LOC111463600 PE=4 SV=1) HSP 1 Score: 227 bits (579), Expect = 3.32e-75 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. ExPASy TrEMBL
Match: A0A6J1IAZ3 (uncharacterized protein LOC111471253 OS=Cucurbita maxima OX=3661 GN=LOC111471253 PE=4 SV=1) HSP 1 Score: 225 bits (574), Expect = 1.92e-74 Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. ExPASy TrEMBL
Match: A0A0A0L0V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294400 PE=4 SV=1) HSP 1 Score: 204 bits (520), Expect = 3.54e-66 Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. ExPASy TrEMBL
Match: A0A5A7STU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00020 PE=4 SV=1) HSP 1 Score: 202 bits (515), Expect = 2.05e-65 Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. ExPASy TrEMBL
Match: A0A6J1CRS0 (uncharacterized protein LOC111013670 OS=Momordica charantia OX=3673 GN=LOC111013670 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 1.24e-60 Identity = 101/120 (84.17%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25 Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Cp4.1LG19g04410 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 6.8e-17 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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