Cp4.1LG11g06050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGTATGGGTTGTGGTAATAGAGCTTTAAGTGACCTTTTTAACTTCTGATTCTCATATTGAATATCCTAGTAACGTTTGCTTGAAGCTGTTTGTTCTCTCTTTCGAAACTATTGCTATTTTTTATGTGGGATGATTGAAACAGTTTGACCTTATAAGCGATATCTTGTAGTTTCAACTATGAAATCTGATTCGTTTTGTTTGTGGTGGTAGAAAAACGCAGCTATGTCAGGGAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGATGACTACTCGTACAGTCCTCCTCGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGTAGAAGACAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCATACTGGAACCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTAGGTGACCGAAATGGATATACCGAGTATCAGCATCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAGCAGAATAAGAGTAGAATTTAGTAGCTGGAACTTGGGTTTGTGGAGTCCCTTTTGTGCAGACTTGCTCTTTGATATGCTGTTTTCTGCCGTAGAAAATAAGATTGAAGAGATAGGCTTTTGTCGTTTTTTTGGTGTTTGCAATGCTCTGATAGATTTAGAGAGCTGAATTGAATATCAGGTATGTTGATAGTCTGTTTGCATATTAGTGTCAAAACTAATCTTCTTTAGGGTAATTTGTTCGTACATTTTGTATCTTTTTGAAGGGTATTATTTTAAGATACAAAATCAAATGAAAATTAA ATGCTTAAAAACGCAGCTATGTCAGGGAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGATGACTACTCGTACAGTCCTCCTCGCAAGGGAATTGTAGAAGACAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCATACTGGAACCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTAGGTGACCGAAATGGATATACCGAGTATCAGCATCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAGCAGAATAAGAGTAGAATTTAGTAGCTGGAACTTGGATACAAAATCAAATGAAAATTAA ATGCTTAAAAACGCAGCTATGTCAGGGAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGATGACTACTCGTACAGTCCTCCTCGCAAGGGAATTGTAGAAGACAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCATACTGGAACCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTAGGTGACCGAAATGGATATACCGAGTATCAGCATCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAGCAGAATAAGAGTAGAATTTAGTAGCTGGAACTTGGATACAAAATCAAATGAAAATTAA MLKNAAMSGKQLDQWGNGYQSYDDDLDDYSYSPPRKGIVEDKQVSSYEQSWRTHDRNRHTGTYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRNGYTEYQHQERFRRVDFGSGGSSSSRIRVEFSSWNLDTKSNEN Homology
BLAST of Cp4.1LG11g06050 vs. NCBI nr
Match: XP_022929740.1 (uncharacterized protein LOC111436237 [Cucurbita moschata]) HSP 1 Score: 238 bits (607), Expect = 1.17e-77 Identity = 122/146 (83.56%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. NCBI nr
Match: KAG7029798.1 (hypothetical protein SDJN02_08141, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231 bits (590), Expect = 1.61e-75 Identity = 119/143 (83.22%), Postives = 124/143 (86.71%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. NCBI nr
Match: KAG6598857.1 (hypothetical protein SDJN03_08635, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230 bits (587), Expect = 2.68e-74 Identity = 119/142 (83.80%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima]) HSP 1 Score: 219 bits (559), Expect = 6.76e-71 Identity = 113/136 (83.09%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. NCBI nr
Match: XP_022157391.1 (uncharacterized protein LOC111024099 [Momordica charantia]) HSP 1 Score: 175 bits (444), Expect = 2.32e-53 Identity = 94/142 (66.20%), Postives = 104/142 (73.24%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. ExPASy TrEMBL
Match: A0A6J1EV61 (uncharacterized protein LOC111436237 OS=Cucurbita moschata OX=3662 GN=LOC111436237 PE=4 SV=1) HSP 1 Score: 238 bits (607), Expect = 5.66e-78 Identity = 122/146 (83.56%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. ExPASy TrEMBL
Match: A0A6J1KE05 (uncharacterized protein LOC111492379 OS=Cucurbita maxima OX=3661 GN=LOC111492379 PE=4 SV=1) HSP 1 Score: 219 bits (559), Expect = 3.27e-71 Identity = 113/136 (83.09%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. ExPASy TrEMBL
Match: A0A6J1DXX9 (uncharacterized protein LOC111024099 OS=Momordica charantia OX=3673 GN=LOC111024099 PE=4 SV=1) HSP 1 Score: 175 bits (444), Expect = 1.12e-53 Identity = 94/142 (66.20%), Postives = 104/142 (73.24%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. ExPASy TrEMBL
Match: A0A5D3CHW8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00440 PE=4 SV=1) HSP 1 Score: 162 bits (409), Expect = 2.02e-48 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Cp4.1LG11g06050 vs. ExPASy TrEMBL
Match: A0A5A7VGP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00800 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 2.86e-48 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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